RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 SCML4Q8N228 414 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 AGGF1Q8N302 714 aaeCLIP17.6■□□□□ 0.41
PTPRO-209ENST00000543886 P2RY11Q96G91 374 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 ELAC2Q9BQ52 826 aaKnown RBP17.6■□□□□ 0.41
PTPRO-209ENST00000543886 WDCPQ9H6R7 721 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 STARD7Q9NQZ5 370 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 SEPT10Q9P0V9 454 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 IQANK1A0A1B0GTG1 560 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 FAM72CH0Y354 149 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 ZNF189O75820 626 aaPredicted RBP17.6■□□□□ 0.41
PTPRO-209ENST00000543886 INHAP05111 366 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 KRT4P19013 534 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 HCAR3P49019 387 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 SPARCL1Q14515 664 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 NOMO2Q5JPE7 1267 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 FAM72AQ5TYM5 149 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 FAM72DQ6L9T8 149 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 TRAF7Q6Q0C0 670 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 RTN4RL1Q86UN2 441 aaPredicted RBP17.6■□□□□ 0.41
PTPRO-209ENST00000543886 FAM72BQ86X60 149 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 NETO2Q8NC67 525 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 CFHR5Q9BXR6 569 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 SSU72Q9NP77 194 aaKnown RBP17.6■□□□□ 0.41
PTPRO-209ENST00000543886 ANLNQ9NQW6 1124 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 FGFR1OP2Q9NVK5 253 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 NR2E3Q9Y5X4 410 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 RAD54BQ9Y620 910 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 GSTA2P09210 222 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 ERCC2P18074 760 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 MAGEA3P43357 314 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 CXCR3P49682 368 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 SEMA3BQ13214 749 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 ITIH4Q14624 930 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 MBTPS1Q14703 1052 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 TAC4Q86UU9 113 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 COLGALT1Q8NBJ5 622 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 RNF34Q969K3 372 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 EPAS1Q99814 870 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 PRDM12Q9H4Q4 367 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 MAD1L1Q9Y6D9 718 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 PATJQ8NI35 1801 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 NLRC5Q86WI3 1866 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 RPA3P35244 121 aaPredicted RBP17.59■□□□□ 0.41
PTPRO-209ENST00000543886 ZNF135P52742 658 aaPredicted RBP17.59■□□□□ 0.41
PTPRO-209ENST00000543886 WDR4P57081 412 aaKnown RBP17.59■□□□□ 0.41
PTPRO-209ENST00000543886 CDK16Q00536 496 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 CLLU1OSQ5K130 101 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 ZNF534Q76KX8 674 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 ZNF280BQ86YH2 543 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 SLC44A1Q8WWI5 657 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 TKTL2Q9H0I9 626 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 HMX1Q9NP08 348 aaPredicted RBP17.59■□□□□ 0.41
PTPRO-209ENST00000543886 CREBZFQ9NS37 354 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 TTLL3Q9Y4R7 772 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 PTPRDP23468 1912 aa17.59■□□□□ 0.41
PTPRO-209ENST00000543886 F5H423 210 aaPredicted RBP17.58■□□□□ 0.4
PTPRO-209ENST00000543886 I6L893 689 aaPredicted RBP17.58■□□□□ 0.4
PTPRO-209ENST00000543886 TRDMT1O14717 391 aaKnown RBP17.58■□□□□ 0.4
PTPRO-209ENST00000543886 DDHD2O94830 711 aa17.58■□□□□ 0.4
PTPRO-209ENST00000543886 ZWINTO95229 277 aa17.58■□□□□ 0.4
PTPRO-209ENST00000543886 ASMTLO95671 621 aa17.58■□□□□ 0.4
PTPRO-209ENST00000543886 GNRH1P01148 92 aa17.58■□□□□ 0.4
PTPRO-209ENST00000543886 GRIK1P39086 918 aa17.58■□□□□ 0.4
PTPRO-209ENST00000543886 ZKSCAN8Q15776 578 aaPredicted RBP17.58■□□□□ 0.4
PTPRO-209ENST00000543886 CTAGE3PQ8IX95 158 aa17.58■□□□□ 0.4
PTPRO-209ENST00000543886 DENND1AQ8TEH3 1009 aa17.58■□□□□ 0.4
PTPRO-209ENST00000543886 LINC01599Q8WXQ3 324 aa17.58■□□□□ 0.4
PTPRO-209ENST00000543886 FAM193BQ96PV7 902 aaPredicted RBP17.58■□□□□ 0.4
PTPRO-209ENST00000543886 KANSL3Q9P2N6 904 aa17.58■□□□□ 0.4
PTPRO-209ENST00000543886 BRCA2P51587 3418 aa17.58■□□□□ 0.4
PTPRO-209ENST00000543886 NCAM2O15394 837 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 TYROBPO43914 113 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 B4GALT3O60512 393 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 MT-ND3P03897 115 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 OR1G1P47890 313 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 DSC1Q08554 894 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 SF3A3Q12874 501 aaKnown RBP eCLIP17.57■□□□□ 0.4
PTPRO-209ENST00000543886 IFRD2Q12894 506 aaPredicted RBP17.57■□□□□ 0.4
PTPRO-209ENST00000543886 SEPT7Q16181 437 aaKnown RBP17.57■□□□□ 0.4
PTPRO-209ENST00000543886 HHATQ5VTY9 493 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 PACS2Q86VP3 889 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 SLC43A3Q8NBI5 491 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 SCAMP5Q8TAC9 235 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 DQX1Q8TE96 717 aaKnown RBP17.57■□□□□ 0.4
PTPRO-209ENST00000543886 MZB1Q8WU39 189 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 ALKBH8Q96BT7 664 aaKnown RBP17.57■□□□□ 0.4
PTPRO-209ENST00000543886 EBNA1BP2Q99848 306 aaKnown RBP17.57■□□□□ 0.4
PTPRO-209ENST00000543886 FTHL17Q9BXU8 183 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 EIF2B3Q9NR50 452 aaKnown RBP17.57■□□□□ 0.4
PTPRO-209ENST00000543886 COL4A4P53420 1690 aaPredicted RBP17.57■□□□□ 0.4
PTPRO-209ENST00000543886 APOEP02649 317 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 AMHP03971 560 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 SLC5A3P53794 718 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 FAM189BP81408 668 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 LHX8Q68G74 356 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 UNC5AQ6ZN44 842 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 BEND5Q7L4P6 421 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 PRPF39Q86UA1 669 aaKnown RBP17.57■□□□□ 0.4
PTPRO-209ENST00000543886 SLC26A11Q86WA9 606 aa17.57■□□□□ 0.4
PTPRO-209ENST00000543886 COLGALT2Q8IYK4 626 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms