RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 PDGFRLQ15198 375 aa8.23□□□□□ -1.09
TRIM59-208ENST00000543469 WDR93Q6P2C0 686 aa8.23□□□□□ -1.09
TRIM59-208ENST00000543469 RFX8Q6ZV50 586 aa8.23□□□□□ -1.09
TRIM59-208ENST00000543469 ADAT2Q7Z6V5 191 aaKnown RBP8.23□□□□□ -1.09
TRIM59-208ENST00000543469 POF1BQ8WVV4 589 aa8.23□□□□□ -1.09
TRIM59-208ENST00000543469 C1orf74Q96LT6 269 aa8.23□□□□□ -1.09
TRIM59-208ENST00000543469 PRKD2Q9BZL6 878 aa8.23□□□□□ -1.09
TRIM59-208ENST00000543469 OR12D3Q9UGF7 316 aa8.23□□□□□ -1.09
TRIM59-208ENST00000543469 COMMD10Q9Y6G5 202 aa8.23□□□□□ -1.09
TRIM59-208ENST00000543469 MCM3APO60318 1980 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 SCN10AQ9Y5Y9 1956 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 hCG_1818297A0A087WSY0 165 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 PPEF2O14830 753 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 HMBSP08397 361 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 IRF1P10914 325 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 PTK6Q13882 451 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 DDR2Q16832 855 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 OLFML1Q6UWY5 402 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 SDCCAG8Q86SQ7 713 aaPredicted RBP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 SRRM1Q8IYB3 904 aaKnown RBP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 KLHL5Q96PQ7 755 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 MAGEH1Q9H213 219 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 NSUN3Q9H649 340 aaKnown RBP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 TASP1Q9H6P5 420 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 PFDN4Q9NQP4 134 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 PI4K2BG5E9Z4 385 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 RGS16O15492 202 aaPredicted RBP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 DPYSL2Q16555 572 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 HIF1AQ16665 826 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 ERCC6LQ2NKX8 1250 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 PUS10Q3MIT2 529 aaKnown RBP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 TMEM240Q5SV17 173 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 PM20D1Q6GTS8 502 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 MICALCLQ6ZW33 695 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 ZNF572Q7Z3I7 529 aaPredicted RBP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 LGI2Q8N0V4 545 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 KLHL23Q8NBE8 558 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 ATAD1Q8NBU5 361 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 DDI1Q8WTU0 396 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 HNRNPLLQ8WVV9 542 aaKnown RBP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 EDEM1Q92611 657 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 GOLPH3Q9H4A6 298 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 CHST7Q9NS84 486 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 KCTD5Q9NXV2 234 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 LMCD1Q9NZU5 365 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 BCCIPQ9P287 314 aaKnown RBP eCLIP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 RNF225M0QZC1 329 aaPredicted RBP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 ZMYND10O75800 440 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 KRT38O76015 456 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 IGSF6O95976 241 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 NPY2RP49146 381 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 OTUD4Q01804 1114 aaKnown RBP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 ZNF697Q5TEC3 545 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 OTOP3Q7RTS5 596 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 PPP1R14CQ8TAE6 165 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 VPS39Q96JC1 886 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 SMOQ99835 787 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 ADGRE3Q9BY15 652 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 ROPN1BQ9BZX4 212 aaPredicted RBP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 DDX47Q9H0S4 455 aaKnown RBP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 ROPN1Q9HAT0 212 aaPredicted RBP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 NR2E1Q9Y466 385 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 MAD1L1Q9Y6D9 718 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 TIMM44O43615 452 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 KRT37O76014 449 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 MSH2P43246 934 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 PARP6Q2NL67 630 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 AARS2Q5JTZ9 985 aaKnown RBP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 GPR158Q5T848 1215 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 PRSS55Q6UWB4 352 aaPredicted RBP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 TRMT11Q7Z4G4 463 aaKnown RBP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 DNAJB7Q7Z6W7 309 aaPredicted RBP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 CELF5Q8N6W0 485 aaKnown RBP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 FAM76AQ8TAV0 307 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 C1orf54Q8WWF1 131 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 SCG3Q8WXD2 468 aaKnown RBP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 TIFAQ96CG3 184 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 CNOT10Q9H9A5 744 aaKnown RBP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 PCDH18Q9HCL0 1135 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 FZD10Q9ULW2 581 aa8.22□□□□□ -1.09
TRIM59-208ENST00000543469 PACSIN2Q9UNF0 486 aaPredicted RBP8.22□□□□□ -1.09
TRIM59-208ENST00000543469 SPTLC1O15269 473 aa8.21□□□□□ -1.09
TRIM59-208ENST00000543469 SMAD3P84022 425 aaKnown RBP8.21□□□□□ -1.09
TRIM59-208ENST00000543469 NRG1Q02297 640 aaPredicted RBP8.21□□□□□ -1.09
TRIM59-208ENST00000543469 SCAPQ12770 1279 aa8.21□□□□□ -1.09
TRIM59-208ENST00000543469 MARC1Q5VT66 337 aa8.21□□□□□ -1.09
TRIM59-208ENST00000543469 TAX1BP1Q86VP1 789 aa8.21□□□□□ -1.09
TRIM59-208ENST00000543469 HTR3CQ8WXA8 447 aa8.21□□□□□ -1.09
TRIM59-208ENST00000543469 TWNKQ96RR1 684 aa8.21□□□□□ -1.09
TRIM59-208ENST00000543469 NPY6RQ99463 290 aa8.21□□□□□ -1.09
TRIM59-208ENST00000543469 HACD3Q9P035 362 aa8.21□□□□□ -1.09
TRIM59-208ENST00000543469 DNAJB4Q9UDY4 337 aa8.21□□□□□ -1.09
TRIM59-208ENST00000543469 AJAP1Q9UKB5 411 aaPredicted RBP8.21□□□□□ -1.09
TRIM59-208ENST00000543469 SLC27A5Q9Y2P5 690 aa8.21□□□□□ -1.09
TRIM59-208ENST00000543469 A0A1B0GVM2 712 aa8.21□□□□□ -1.1
TRIM59-208ENST00000543469 TCAF2A6NFQ2 919 aa8.21□□□□□ -1.1
TRIM59-208ENST00000543469 CXCR3P49682 368 aa8.21□□□□□ -1.1
TRIM59-208ENST00000543469 DHX9Q08211 1270 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms