RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 BYSLQ13895 437 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 ZNF234Q14588 700 aa13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 EIF4HQ15056 248 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 TPD52L1Q16890 204 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 FUT11Q495W5 492 aa13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 MPP7Q5T2T1 576 aa13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 STPG1Q5TH74 334 aa13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 KLHDC7AQ5VTJ3 777 aa13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 METTL3Q86U44 580 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 FAM114A1Q8IWE2 563 aa13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 PGBD3Q8N328 593 aa13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 ENOX1Q8TC92 643 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 MKRN2Q9H000 416 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 TLR6Q9Y2C9 796 aa13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 ASCC3Q8N3C0 2202 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 PATE3B3GLJ2 98 aa13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 KCNJ18B7U540 433 aa13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 IRAK2O43187 625 aa13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 PRKCSHP14314 528 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 PRKCHP24723 683 aa13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 SLC11A2P49281 568 aa13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 DHPSP49366 369 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 KCNJ12Q14500 433 aa13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 PTPRNQ16849 979 aa13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 AASDHQ4L235 1098 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 TCP11X2Q5H9J9 407 aa13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 CDKAL1Q5VV42 579 aa13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 PEAR1Q5VY43 1037 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 LPCAT2Q7L5N7 544 aa13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 PASD1Q8IV76 773 aa13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 GOLGA1Q92805 767 aa13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 FAM149B1Q96BN6 582 aa13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 PPP1R13BQ96KQ4 1090 aa13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 SPACA7Q96KW9 195 aa13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 PRICKLE1Q96MT3 831 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 SERPINB11Q96P15 392 aa13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 SLC2A13Q96QE2 648 aa13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 TMEM245Q9H330 911 aa13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 POPDC2Q9HBU9 364 aa13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 DACH1Q9UI36 760 aa13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 XPO7Q9UIA9 1087 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 PILRBQ9UKJ0 227 aa13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 FHOD1Q9Y613 1164 aa13.62□□□□□ -0.23
TNFRSF1A-215ENST00000543359 KNL1Q8NG31 2342 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 LNP1A1A4G5 178 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 KCNU1A8MYU2 1149 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 MAP3K13O43283 966 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 TBL1XO60907 577 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 TRUB2O95900 331 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 GLI1P08151 1106 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 EEF1GP26641 437 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 CD70P32970 193 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 COPAP53621 1224 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 RPS24P62847 133 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 PTK2Q05397 1052 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 DRAP1Q14919 205 aaPredicted RBP13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 PTPN20Q4JDL3 420 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 ZC3H12AQ5D1E8 599 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 MS4A13Q5J8X5 152 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 ARMCX6Q7L4S7 300 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 CYP2U1Q7Z449 544 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 SLC41A1Q8IVJ1 513 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 C12orf50Q8NA57 414 aaPredicted RBP13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 C1orf131Q8NDD1 294 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 FIBINQ8TAL6 211 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 WFIKKN2Q8TEU8 576 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 UCMAQ8WVF2 138 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 DDX1Q92499 740 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 PIGKQ92643 395 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 NUCKS1Q9H1E3 243 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 ITM2CQ9NQX7 267 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 ABCB8Q9NUT2 735 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 ASNSD1Q9NWL6 643 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 EVLQ9UI08 416 aaPredicted RBP13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 GGA2Q9UJY4 613 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 INTS6Q9UL03 887 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 CYP8B1Q9UNU6 501 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 NFE2L3Q9Y4A8 694 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 SPEGQ15772 3267 aa13.61□□□□□ -0.23
TNFRSF1A-215ENST00000543359 WDFY3Q8IZQ1 3526 aa13.6□□□□□ -0.23
TNFRSF1A-215ENST00000543359 AKAP13Q12802 2813 aa13.6□□□□□ -0.23
TNFRSF1A-215ENST00000543359 CDX4O14627 284 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1A-215ENST00000543359 ZNF217O75362 1048 aa13.6□□□□□ -0.23
TNFRSF1A-215ENST00000543359 ERBB2P04626 1255 aa13.6□□□□□ -0.23
TNFRSF1A-215ENST00000543359 PABPC1P11940 636 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1A-215ENST00000543359 HLA-EP13747 358 aa13.6□□□□□ -0.23
TNFRSF1A-215ENST00000543359 ITPKAP23677 461 aa13.6□□□□□ -0.23
TNFRSF1A-215ENST00000543359 CDH5P33151 784 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1A-215ENST00000543359 IRX4P78413 519 aa13.6□□□□□ -0.23
TNFRSF1A-215ENST00000543359 RPL6Q02878 288 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1A-215ENST00000543359 CAMK2GQ13555 558 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1A-215ENST00000543359 DCAF6Q58WW2 860 aa13.6□□□□□ -0.23
TNFRSF1A-215ENST00000543359 OLFML1Q6UWY5 402 aa13.6□□□□□ -0.23
TNFRSF1A-215ENST00000543359 SLC36A4Q6YBV0 504 aa13.6□□□□□ -0.23
TNFRSF1A-215ENST00000543359 FAM183BPQ6ZVS7 135 aa13.6□□□□□ -0.23
TNFRSF1A-215ENST00000543359 CHST9Q7L1S5 443 aa13.6□□□□□ -0.23
TNFRSF1A-215ENST00000543359 TMPRSS6Q8IU80 811 aa13.6□□□□□ -0.23
TNFRSF1A-215ENST00000543359 SYT12Q8IV01 421 aa13.6□□□□□ -0.23
TNFRSF1A-215ENST00000543359 DEFB106AQ8N104 65 aa13.6□□□□□ -0.23
TNFRSF1A-215ENST00000543359 DEFB119Q8N690 84 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms