RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 ZSCAN30Q86W11 494 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 BBS7Q8IWZ6 715 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 C17orf53Q8N3J3 647 aaPredicted RBP23.92■■□□□ 1.42
HOMER3-205ENST00000542541 CD101Q93033 1021 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 ANLNQ9NQW6 1124 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 DDX56Q9NY93 547 aaKnown RBP23.92■■□□□ 1.42
HOMER3-205ENST00000542541 LIMD1Q9UGP4 676 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 NUMBLQ9Y6R0 609 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 DOCK8Q8NF50 2099 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 GJC1P36383 396 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 FCHO2Q0JRZ9 810 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 ODF2Q5BJF6 829 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 MS4A13Q5J8X5 152 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 KCNT1Q5JUK3 1230 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 CYP4V2Q6ZWL3 525 aaPredicted RBP23.92■■□□□ 1.42
HOMER3-205ENST00000542541 ADHFE1Q8IWW8 467 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 UBL4BQ8N7F7 174 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 RIN3Q8TB24 985 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 OSCP1Q8WVF1 389 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 HSPH1Q92598 858 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 DHX35Q9H5Z1 703 aaKnown RBP23.92■■□□□ 1.42
HOMER3-205ENST00000542541 TMPRSS4Q9NRS4 437 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 DUS2Q9NX74 493 aaKnown RBP23.92■■□□□ 1.42
HOMER3-205ENST00000542541 OR12D3Q9UGF7 316 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 XPO7Q9UIA9 1087 aaKnown RBP23.92■■□□□ 1.42
HOMER3-205ENST00000542541 HS3ST4Q9Y661 456 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 NUP210Q8TEM1 1887 aaPredicted RBP23.91■■□□□ 1.42
HOMER3-205ENST00000542541 I6L893 689 aaPredicted RBP23.91■■□□□ 1.42
HOMER3-205ENST00000542541 CTNNA1P35221 906 aaKnown RBP23.91■■□□□ 1.42
HOMER3-205ENST00000542541 IFNAR2P48551 515 aa23.91■■□□□ 1.42
HOMER3-205ENST00000542541 ZNF135P52742 658 aaPredicted RBP23.91■■□□□ 1.42
HOMER3-205ENST00000542541 SMTNL2Q2TAL5 461 aa23.91■■□□□ 1.42
HOMER3-205ENST00000542541 LRRC31Q6UY01 552 aa23.91■■□□□ 1.42
HOMER3-205ENST00000542541 MAP7D3Q8IWC1 876 aa23.91■■□□□ 1.42
HOMER3-205ENST00000542541 CPXM2Q8N436 756 aa23.91■■□□□ 1.42
HOMER3-205ENST00000542541 TRMT61BQ9BVS5 477 aaKnown RBP23.91■■□□□ 1.42
HOMER3-205ENST00000542541 PCDHA3Q9Y5H8 950 aa23.91■■□□□ 1.42
HOMER3-205ENST00000542541 LOC730098B7Z3J9 87 aa23.9■■□□□ 1.42
HOMER3-205ENST00000542541 F5H5T6 163 aa23.9■■□□□ 1.42
HOMER3-205ENST00000542541 SCAMP3O14828 347 aaKnown RBP23.9■■□□□ 1.42
HOMER3-205ENST00000542541 CTNNA2P26232 953 aa23.9■■□□□ 1.42
HOMER3-205ENST00000542541 L1CAMP32004 1257 aa23.9■■□□□ 1.42
HOMER3-205ENST00000542541 GNG11P61952 73 aa23.9■■□□□ 1.42
HOMER3-205ENST00000542541 NRG1Q02297 640 aaPredicted RBP23.9■■□□□ 1.42
HOMER3-205ENST00000542541 PDGFRLQ15198 375 aa23.9■■□□□ 1.42
HOMER3-205ENST00000542541 PIK3R6Q5UE93 754 aa23.9■■□□□ 1.42
HOMER3-205ENST00000542541 TXNRD3NBQ6F5E7 133 aa23.9■■□□□ 1.42
HOMER3-205ENST00000542541 CHSY1Q86X52 802 aa23.9■■□□□ 1.42
HOMER3-205ENST00000542541 FAM217AQ8IXS0 508 aa23.9■■□□□ 1.42
HOMER3-205ENST00000542541 KCTD6Q8NC69 237 aa23.9■■□□□ 1.42
HOMER3-205ENST00000542541 ST13P5Q8NFI4 369 aaPredicted RBP23.9■■□□□ 1.42
HOMER3-205ENST00000542541 PLA2G2FQ9BZM2 168 aa23.9■■□□□ 1.42
HOMER3-205ENST00000542541 KCNK12Q9HB15 430 aa23.9■■□□□ 1.42
HOMER3-205ENST00000542541 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.9■■□□□ 1.42
HOMER3-205ENST00000542541 JRKLQ9Y4A0 524 aa23.9■■□□□ 1.42
HOMER3-205ENST00000542541 WNT6Q9Y6F9 365 aa23.9■■□□□ 1.42
HOMER3-205ENST00000542541 TACR2P21452 398 aa23.89■■□□□ 1.42
HOMER3-205ENST00000542541 AUHQ13825 339 aaKnown RBP23.89■■□□□ 1.42
HOMER3-205ENST00000542541 PDK2Q15119 407 aa23.89■■□□□ 1.42
HOMER3-205ENST00000542541 DPYSL2Q16555 572 aa23.89■■□□□ 1.42
HOMER3-205ENST00000542541 FAM133BQ5BKY9 247 aaKnown RBP23.89■■□□□ 1.42
HOMER3-205ENST00000542541 MEI1Q5TIA1 1274 aa23.89■■□□□ 1.42
HOMER3-205ENST00000542541 RAP1GAP2Q684P5 730 aa23.89■■□□□ 1.42
HOMER3-205ENST00000542541 NADSYN1Q6IA69 706 aa23.89■■□□□ 1.42
HOMER3-205ENST00000542541 EPAS1Q99814 870 aa23.89■■□□□ 1.42
HOMER3-205ENST00000542541 PRMT1Q99873 361 aaKnown RBP23.89■■□□□ 1.42
HOMER3-205ENST00000542541 GPATCH2LQ9NWQ4 482 aa23.89■■□□□ 1.42
HOMER3-205ENST00000542541 GOLGA6L7A0A1B0GV03 622 aa23.88■■□□□ 1.41
HOMER3-205ENST00000542541 CHADO15335 359 aa23.88■■□□□ 1.41
HOMER3-205ENST00000542541 HTR7P34969 479 aa23.88■■□□□ 1.41
HOMER3-205ENST00000542541 KRT81Q14533 505 aa23.88■■□□□ 1.41
HOMER3-205ENST00000542541 RPS6KA1Q15418 735 aa23.88■■□□□ 1.41
HOMER3-205ENST00000542541 KATNAL2Q8IYT4 538 aa23.88■■□□□ 1.41
HOMER3-205ENST00000542541 ADGRG2Q8IZP9 1017 aa23.88■■□□□ 1.41
HOMER3-205ENST00000542541 SLC35F6Q8N357 371 aa23.88■■□□□ 1.41
HOMER3-205ENST00000542541 HES6Q96HZ4 224 aa23.88■■□□□ 1.41
HOMER3-205ENST00000542541 ASB2Q96Q27 587 aa23.88■■□□□ 1.41
HOMER3-205ENST00000542541 RPP25Q9BUL9 199 aaKnown RBP23.88■■□□□ 1.41
HOMER3-205ENST00000542541 LINC00597Q9H2U6 94 aa23.88■■□□□ 1.41
HOMER3-205ENST00000542541 HELZP42694 1942 aaKnown RBP23.88■■□□□ 1.41
HOMER3-205ENST00000542541 TYW5A2RUC4 315 aaKnown RBP23.88■■□□□ 1.41
HOMER3-205ENST00000542541 CYBBP04839 570 aa23.88■■□□□ 1.41
HOMER3-205ENST00000542541 CDH6P55285 790 aa23.88■■□□□ 1.41
HOMER3-205ENST00000542541 RWDD2BP57060 319 aa23.88■■□□□ 1.41
HOMER3-205ENST00000542541 GRM2Q14416 872 aa23.88■■□□□ 1.41
HOMER3-205ENST00000542541 ATP13A4Q4VNC1 1196 aa23.88■■□□□ 1.41
HOMER3-205ENST00000542541 PPP6R3Q5H9R7 873 aaPredicted RBP23.88■■□□□ 1.41
HOMER3-205ENST00000542541 RABGAP1LQ5R372 815 aa23.88■■□□□ 1.41
HOMER3-205ENST00000542541 LGI2Q8N0V4 545 aa23.88■■□□□ 1.41
HOMER3-205ENST00000542541 ATP2A3Q93084 1043 aa23.88■■□□□ 1.41
HOMER3-205ENST00000542541 TMA16Q96EY4 203 aaKnown RBP23.88■■□□□ 1.41
HOMER3-205ENST00000542541 FAM83CQ9BQN1 747 aa23.88■■□□□ 1.41
HOMER3-205ENST00000542541 SRGAP2O75044 1071 aa23.87■■□□□ 1.41
HOMER3-205ENST00000542541 ZRANB2O95218 330 aaKnown RBP eCLIP23.87■■□□□ 1.41
HOMER3-205ENST00000542541 NFATC1O95644 943 aa23.87■■□□□ 1.41
HOMER3-205ENST00000542541 GDI1P31150 447 aa23.87■■□□□ 1.41
HOMER3-205ENST00000542541 SLC6A4P31645 630 aa23.87■■□□□ 1.41
HOMER3-205ENST00000542541 ARL4AP40617 200 aa23.87■■□□□ 1.41
HOMER3-205ENST00000542541 ZP2Q05996 745 aa23.87■■□□□ 1.41
HOMER3-205ENST00000542541 CA9Q16790 459 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms