RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 SERPINB6P35237 376 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 GBE1Q04446 702 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 EFTUD2Q15029 972 aaKnown RBP eCLIP10.17□□□□□ -0.785e-13■■■■■ 88.9
SS18-205ENST00000542420 FAM26DQ5JW98 314 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 CST9Q5W186 159 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 PM20D1Q6GTS8 502 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 UNC5AQ6ZN44 842 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 ECHDC2Q86YB7 292 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 CLEC4CQ8WTT0 213 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 ACBD6Q9BR61 282 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 MANSC1Q9H8J5 431 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 ECT2Q9H8V3 914 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 TRHDEQ9UKU6 1024 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 EME2A4GXA9 379 aaPredicted RBP10.17□□□□□ -0.78
SS18-205ENST00000542420 SDR42E2A6NKP2 422 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 COPEO14579 308 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 TNPO2O14787 897 aaKnown RBP10.17□□□□□ -0.78
SS18-205ENST00000542420 METTL18O95568 372 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 GOT1P17174 413 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 PGAM1P18669 254 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 CRHR1P34998 444 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 ADRA1BP35368 520 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 TKTL1P51854 596 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 ELF3P78545 371 aaPredicted RBP10.17□□□□□ -0.78
SS18-205ENST00000542420 FAAP100Q0VG06 881 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 INSCQ1MX18 579 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 HP1BP3Q5SSJ5 553 aaPredicted RBP10.17□□□□□ -0.78
SS18-205ENST00000542420 WSCD1Q658N2 575 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 ATG16L1Q676U5 607 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 RGMBQ6NW40 437 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 FAM171BQ6P995 826 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 RFX8Q6ZV50 586 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 METTL23Q86XA0 190 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 AGGF1Q8N302 714 aaeCLIP10.17□□□□□ -0.78
SS18-205ENST00000542420 FITM2Q8N6M3 262 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 GSTCDQ8NEC7 633 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 CCDC110Q8TBZ0 833 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 SH3TC2Q8TF17 1288 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 STAMBPL1Q96FJ0 436 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 C7orf26Q96N11 449 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 LRRC37BQ96QE4 947 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 MED10Q9BTT4 135 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 KIF9Q9HAQ2 790 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 MLXIPLQ9NP71 852 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 FNIP2Q9P278 1114 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 FBXW11Q9UKB1 542 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 GRID1Q9ULK0 1009 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 ST3GAL5Q9UNP4 418 aa10.17□□□□□ -0.78
SS18-205ENST00000542420 MTO1Q9Y2Z2 717 aaKnown RBP10.17□□□□□ -0.78
SS18-205ENST00000542420 M0QZQ0 153 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 EEF2KO00418 725 aaKnown RBP10.16□□□□□ -0.78
SS18-205ENST00000542420 TFE3P19532 575 aaPredicted RBP10.16□□□□□ -0.78
SS18-205ENST00000542420 TYMPP19971 482 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 CYP2B6P20813 491 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 AMPD1P23109 780 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 ZNF157P51786 506 aaPredicted RBP10.16□□□□□ -0.78
SS18-205ENST00000542420 COG7P83436 770 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 BEX3Q00994 111 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 DSC3Q14574 896 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 CCL14Q16627 93 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 DCAF6Q58WW2 860 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 MDH1BQ5I0G3 518 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 SPANXN3Q5MJ09 141 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 ZNF618Q5T7W0 954 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 ITPRIPL1Q6GPH6 555 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 KYAT3Q6YP21 454 aaKnown RBP10.16□□□□□ -0.78
SS18-205ENST00000542420 CAPN12Q6ZSI9 719 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 OTOAQ7RTW8 1153 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 FAM149B1Q96BN6 582 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 HDAC11Q96DB2 347 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 PAIP2Q9BPZ3 127 aaKnown RBP10.16□□□□□ -0.78
SS18-205ENST00000542420 TRIM55Q9BYV6 548 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 ADAM33Q9BZ11 813 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 IQCGQ9H095 443 aaKnown RBP10.16□□□□□ -0.78
SS18-205ENST00000542420 OSBPL2Q9H1P3 480 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 LRMDAQ9H2I8 198 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 PLAC1Q9HBJ0 212 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 CRTAC1Q9NQ79 661 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 KRT82Q9NSB4 513 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 LNPEPQ9UIQ6 1025 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 ADAM28Q9UKQ2 775 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 MAGEB16A2A368 324 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 HHLA1C9JL84 531 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 M0QYT0 321 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 MFSD11O43934 449 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 ATP2C2O75185 946 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 LTFP02788 710 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 VAV1P15498 845 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 ADRA1DP25100 572 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 CXCR3P49682 368 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 FCGRTP55899 365 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 PPIDQ08752 370 aaKnown RBP10.16□□□□□ -0.78
SS18-205ENST00000542420 MGAT5Q09328 741 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 NIPAL4Q0D2K0 466 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 DSTYKQ6XUX3 929 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 CCDC117Q8IWD4 279 aaPredicted RBP10.16□□□□□ -0.78
SS18-205ENST00000542420 CFAP36Q96G28 342 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 RMDN2Q96LZ7 410 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 EPAS1Q99814 870 aa10.16□□□□□ -0.78
SS18-205ENST00000542420 FAM96AQ9H5X1 160 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms