RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 CFIP05156 583 aa16.26■□□□□ 0.19
VPS33A-206ENST00000542310 PABPC1P11940 636 aaKnown RBP16.26■□□□□ 0.19
VPS33A-206ENST00000542310 KRT5P13647 590 aa16.26■□□□□ 0.19
VPS33A-206ENST00000542310 OXTRP30559 389 aa16.26■□□□□ 0.19
VPS33A-206ENST00000542310 COPAP53621 1224 aa16.26■□□□□ 0.19
VPS33A-206ENST00000542310 TBX4P57082 545 aa16.26■□□□□ 0.19
VPS33A-206ENST00000542310 FAM133BQ5BKY9 247 aaKnown RBP16.26■□□□□ 0.19
VPS33A-206ENST00000542310 SH3PXD2AQ5TCZ1 1133 aa16.26■□□□□ 0.19
VPS33A-206ENST00000542310 PIK3R6Q5UE93 754 aa16.26■□□□□ 0.19
VPS33A-206ENST00000542310 TRIM65Q6PJ69 517 aa16.26■□□□□ 0.19
VPS33A-206ENST00000542310 CADM4Q8NFZ8 388 aa16.26■□□□□ 0.19
VPS33A-206ENST00000542310 DQX1Q8TE96 717 aaKnown RBP16.26■□□□□ 0.19
VPS33A-206ENST00000542310 PRCCQ92733 491 aaPredicted RBP16.26■□□□□ 0.19
VPS33A-206ENST00000542310 SIPA1Q96FS4 1042 aa16.26■□□□□ 0.19
VPS33A-206ENST00000542310 CD93Q9NPY3 652 aa16.26■□□□□ 0.19
VPS33A-206ENST00000542310 ITM2CQ9NQX7 267 aa16.26■□□□□ 0.19
VPS33A-206ENST00000542310 WSB2Q9NYS7 404 aaPredicted RBP16.26■□□□□ 0.19
VPS33A-206ENST00000542310 GGA2Q9UJY4 613 aa16.26■□□□□ 0.19
VPS33A-206ENST00000542310 TLR6Q9Y2C9 796 aa16.26■□□□□ 0.19
VPS33A-206ENST00000542310 CACNA1BQ00975 2339 aa16.25■□□□□ 0.19
VPS33A-206ENST00000542310 EPG5Q9HCE0 2579 aa16.25■□□□□ 0.19
VPS33A-206ENST00000542310 PIK3R2O00459 728 aa16.25■□□□□ 0.19
VPS33A-206ENST00000542310 TSPAN3O60637 253 aa16.25■□□□□ 0.19
VPS33A-206ENST00000542310 EPHX1P07099 455 aa16.25■□□□□ 0.19
VPS33A-206ENST00000542310 GNA15P30679 374 aa16.25■□□□□ 0.19
VPS33A-206ENST00000542310 ATXN3P54252 364 aaPredicted RBP16.25■□□□□ 0.19
VPS33A-206ENST00000542310 GFPT1Q06210 699 aaPredicted RBP16.25■□□□□ 0.19
VPS33A-206ENST00000542310 ZNF252P-AS1Q0IIN9 211 aa16.25■□□□□ 0.19
VPS33A-206ENST00000542310 CAMK2GQ13555 558 aaPredicted RBP16.25■□□□□ 0.19
VPS33A-206ENST00000542310 WDR45BQ5MNZ6 344 aa16.25■□□□□ 0.19
VPS33A-206ENST00000542310 CHST9Q7L1S5 443 aa16.25■□□□□ 0.19
VPS33A-206ENST00000542310 TMPRSS6Q8IU80 811 aa16.25■□□□□ 0.19
VPS33A-206ENST00000542310 HJURPQ8NCD3 748 aaPredicted RBP16.25■□□□□ 0.19
VPS33A-206ENST00000542310 OR2T3Q8NH03 318 aa16.25■□□□□ 0.19
VPS33A-206ENST00000542310 FCRL2Q96LA5 508 aaPredicted RBP16.25■□□□□ 0.19
VPS33A-206ENST00000542310 SLC4A5Q9BY07 1137 aa16.25■□□□□ 0.19
VPS33A-206ENST00000542310 PCED1AQ9H1Q7 454 aa16.25■□□□□ 0.19
VPS33A-206ENST00000542310 TMEM245Q9H330 911 aa16.25■□□□□ 0.19
VPS33A-206ENST00000542310 UBE2TQ9NPD8 197 aaPredicted RBP16.25■□□□□ 0.19
VPS33A-206ENST00000542310 ABCB8Q9NUT2 735 aa16.25■□□□□ 0.19
VPS33A-206ENST00000542310 APEX2Q9UBZ4 518 aa16.25■□□□□ 0.19
VPS33A-206ENST00000542310 MAP1BP46821 2468 aaKnown RBP16.25■□□□□ 0.19
VPS33A-206ENST00000542310 PCNX2A6NKB5 2137 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 CALCAP01258 141 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 FYNP06241 537 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 ATP5BP06576 529 aaKnown RBP16.24■□□□□ 0.19
VPS33A-206ENST00000542310 SYPP08247 313 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 DLDP09622 509 aaKnown RBP16.24■□□□□ 0.19
VPS33A-206ENST00000542310 ACADMP11310 421 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 GNSP15586 552 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 SLC6A4P31645 630 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 MAPK8P45983 427 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 TPMTP51580 245 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 SGSHP51688 502 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 FNDC3BQ53EP0 1204 aaKnown RBP16.24■□□□□ 0.19
VPS33A-206ENST00000542310 GBP6Q6ZN66 633 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 TMEM110Q86TL2 294 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 ADIPOR2Q86V24 386 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 HDDC3Q8N4P3 179 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 MLKLQ8NB16 471 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 ZNF606Q8WXB4 792 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 SORCS1Q8WY21 1168 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 DNASE2BQ8WZ79 361 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 FAM149B1Q96BN6 582 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 ERLEC1Q96DZ1 483 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 TOE1Q96GM8 510 aaKnown RBP16.24■□□□□ 0.19
VPS33A-206ENST00000542310 SLC39A13Q96H72 371 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 PRICKLE1Q96MT3 831 aaPredicted RBP16.24■□□□□ 0.19
VPS33A-206ENST00000542310 MED15Q96RN5 788 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 MIS12Q9H081 205 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 SLC32A1Q9H598 525 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 ST7Q9NRC1 585 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 PLA2G4CQ9UP65 541 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 CHD8Q9HCK8 2581 aa16.24■□□□□ 0.19
VPS33A-206ENST00000542310 KMT2BQ9UMN6 2715 aaPredicted RBP16.23■□□□□ 0.19
VPS33A-206ENST00000542310 MEI4A8MW99 385 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 ARHGAP33O14559 1287 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 THAP12O43422 761 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 TBL1XO60907 577 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 LETM1O95202 739 aaPredicted RBP16.23■□□□□ 0.19
VPS33A-206ENST00000542310 PRKCSHP14314 528 aaPredicted RBP16.23■□□□□ 0.19
VPS33A-206ENST00000542310 ZBTB16Q05516 673 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 SEMA3BQ13214 749 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 PDCLQ13371 301 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 PTPRNQ16849 979 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 EXOC3L4Q17RC7 722 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 UAP1L1Q3KQV9 507 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 MBLAC2Q68D91 279 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 NADSYN1Q6IA69 706 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 DENND1BQ6P3S1 775 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 RFWD3Q6PCD5 774 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 TAC4Q86UU9 113 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 MFN1Q8IWA4 741 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 RGL4Q8IZJ4 473 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 DEFB119Q8N690 84 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 SHC3Q92529 594 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 NUP58Q9BVL2 599 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 ZDHHC5Q9C0B5 715 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 POPDC2Q9HBU9 364 aa16.23■□□□□ 0.19
VPS33A-206ENST00000542310 DNAAF2Q9NVR5 837 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms