RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 F8VZ95 297 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 O00370 1275 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 CBFA2T2O43439 604 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 MED7O43513 233 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 AP1G2O75843 785 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 OAS1P00973 400 aaKnown RBP9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 FAM200BP0CF97 657 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 CHRM1P11229 460 aaPredicted RBP9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 CD19P15391 556 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 CLCN1P35523 988 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 PPP3CCP48454 512 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 CACNA2D1P54289 1103 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 BCAT1P54687 386 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 BPIFB4P59827 614 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 PTK2Q05397 1052 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 PKDCCQ504Y2 493 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 CCDC157Q569K6 752 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 EGFLAMQ63HQ2 1017 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 GRAMD4Q6IC98 578 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 SARM1Q6SZW1 724 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 LCLAT1Q6UWP7 414 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 CLEC20AQ6ZU45 233 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 SLCO6A1Q86UG4 719 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 MARCH9Q86YJ5 346 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 MIB1Q86YT6 1006 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 FMNL3Q8IVF7 1028 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 BBS7Q8IWZ6 715 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 PHTF2Q8N3S3 785 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 TERB1Q8NA31 727 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 ZMIZ2Q8NF64 920 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 FBXO32Q969P5 355 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 IQCDQ96DY2 449 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 CRELD1Q96HD1 420 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 PCMTD1Q96MG8 357 aaPredicted RBP9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 DCBLD2Q96PD2 775 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 ACOX2Q99424 681 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 SMOQ99835 787 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 NUP58Q9BVL2 599 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 TTLL2Q9BWV7 592 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 DUSP16Q9BY84 665 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 UBXN6Q9BZV1 441 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 PRDM16Q9HAZ2 1276 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 SPHK2Q9NRA0 654 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 KRT82Q9NSB4 513 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 TMEM30AQ9NV96 361 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 DNAJC17Q9NVM6 304 aaKnown RBP9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 COMMD8Q9NX08 183 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 HESX1Q9UBX0 185 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 CHORDC1Q9UHD1 332 aaPredicted RBP9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 TSPAN16Q9UKR8 245 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 MYO6Q9UM54 1294 aa9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.11□□□□□ -0.95
CLSTN3-212ENST00000541770 ITIH6Q6UXX5 1313 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 PKD1L2Q7Z442 2459 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 A0A1W2PQF6 199 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 E2F8A0AVK6 867 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 NEDD8-MDP1E9PL57 170 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 CYP26A1O43174 497 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 COCHO43405 550 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 GJB3O75712 270 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 BEST1O76090 585 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 OLFM2O95897 454 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 PRB1P04280 392 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 SETSIPP0DME0 302 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 BRD2P25440 801 aaKnown RBP9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 YWHAQP27348 245 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 ADORA2BP29275 332 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 GNA15P30679 374 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 SOX5P35711 763 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 USP8P40818 1118 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 STAT1P42224 750 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 MAP3K7CLP57077 242 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 SLC8A3P57103 927 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 CYP4F3Q08477 520 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 BST2Q10589 180 aaKnown RBP9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 GOLGA7BQ2TAP0 167 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 WDR45BQ5MNZ6 344 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 TPGS1Q6ZTW0 290 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 TMEM25Q86YD3 366 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 NUP93Q8N1F7 819 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 ZCCHC9Q8N567 271 aaKnown RBP9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 KCNV2Q8TDN2 545 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 RHBDD1Q8TEB9 315 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 ZNF606Q8WXB4 792 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 TFAP2BQ92481 460 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 FOXJ1Q92949 421 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 ZNF419Q96HQ0 510 aaPredicted RBP9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 XPO6Q96QU8 1125 aaKnown RBP9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 SPAG5Q96R06 1193 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 KCNK16Q96T55 309 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 ZSWIM1Q9BR11 485 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 XPO4Q9C0E2 1151 aaKnown RBP9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 TTYH3Q9C0H2 523 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 GAREM1Q9H706 876 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 IL21RQ9HBE5 538 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 NLRC4Q9NPP4 1024 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 CACNA2D2Q9NY47 1150 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 IL37Q9NZH6 218 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 PCOLCE2Q9UKZ9 415 aa9.1□□□□□ -0.95
CLSTN3-212ENST00000541770 CACNA1EQ15878 2313 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms