RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 CALR3Q96L12 384 aaKnown RBP19.46■□□□□ 0.71
VPS33A-205ENST00000541169 PNKPQ96T60 521 aa19.46■□□□□ 0.71
VPS33A-205ENST00000541169 BAG1Q99933 345 aaPredicted RBP19.46■□□□□ 0.71
VPS33A-205ENST00000541169 TKTL2Q9H0I9 626 aa19.46■□□□□ 0.71
VPS33A-205ENST00000541169 THAP2Q9H0W7 228 aa19.46■□□□□ 0.71
VPS33A-205ENST00000541169 DEC1Q9P2X7 70 aa19.46■□□□□ 0.71
VPS33A-205ENST00000541169 SYNJ2BP-COX16A0A087WUM0 186 aa19.45■□□□□ 0.7
VPS33A-205ENST00000541169 A0A0A0MRY4 1105 aa19.45■□□□□ 0.7
VPS33A-205ENST00000541169 EIF3CLB5ME19 914 aaKnown RBP19.45■□□□□ 0.7
VPS33A-205ENST00000541169 NEDD8-MDP1E9PL57 170 aa19.45■□□□□ 0.7
VPS33A-205ENST00000541169 F5H5T6 163 aa19.45■□□□□ 0.7
VPS33A-205ENST00000541169 GFRA2O00451 464 aa19.45■□□□□ 0.7
VPS33A-205ENST00000541169 NRDCO43847 1150 aa19.45■□□□□ 0.7
VPS33A-205ENST00000541169 PITX1P78337 314 aaPredicted RBP19.45■□□□□ 0.7
VPS33A-205ENST00000541169 ATP11AP98196 1134 aa19.45■□□□□ 0.7
VPS33A-205ENST00000541169 UBXN2BQ14CS0 331 aa19.45■□□□□ 0.7
VPS33A-205ENST00000541169 PIK3R6Q5UE93 754 aa19.45■□□□□ 0.7
VPS33A-205ENST00000541169 OTUD1Q5VV17 481 aaPredicted RBP19.45■□□□□ 0.7
VPS33A-205ENST00000541169 TRNP1Q6NT89 227 aa19.45■□□□□ 0.7
VPS33A-205ENST00000541169 TPGS1Q6ZTW0 290 aa19.45■□□□□ 0.7
VPS33A-205ENST00000541169 PHLDB2Q86SQ0 1253 aa19.45■□□□□ 0.7
VPS33A-205ENST00000541169 RHOT2Q8IXI1 618 aa19.45■□□□□ 0.7
VPS33A-205ENST00000541169 ETFBKMTQ8IXQ9 262 aa19.45■□□□□ 0.7
VPS33A-205ENST00000541169 KCNV2Q8TDN2 545 aa19.45■□□□□ 0.7
VPS33A-205ENST00000541169 FAM172AQ8WUF8 416 aa19.45■□□□□ 0.7
VPS33A-205ENST00000541169 NTAN1Q96AB6 310 aa19.45■□□□□ 0.7
VPS33A-205ENST00000541169 EIF3CQ99613 913 aaKnown RBP19.45■□□□□ 0.7
VPS33A-205ENST00000541169 COX16Q9P0S2 106 aa19.45■□□□□ 0.7
VPS33A-205ENST00000541169 MYO1AQ9UBC5 1043 aa19.45■□□□□ 0.7
VPS33A-205ENST00000541169 IP6K2Q9UHH9 426 aa19.45■□□□□ 0.7
VPS33A-205ENST00000541169 FAM170BA6NMN3 283 aa19.44■□□□□ 0.7
VPS33A-205ENST00000541169 MYO1FO00160 1098 aa19.44■□□□□ 0.7
VPS33A-205ENST00000541169 SCAMP3O14828 347 aaKnown RBP19.44■□□□□ 0.7
VPS33A-205ENST00000541169 MOCS2O96007 188 aaPredicted RBP19.44■□□□□ 0.7
VPS33A-205ENST00000541169 PSMA2P25787 234 aa19.44■□□□□ 0.7
VPS33A-205ENST00000541169 GRIA2P42262 883 aa19.44■□□□□ 0.7
VPS33A-205ENST00000541169 OXCT1P55809 520 aa19.44■□□□□ 0.7
VPS33A-205ENST00000541169 FAM133BQ5BKY9 247 aaKnown RBP19.44■□□□□ 0.7
VPS33A-205ENST00000541169 MS4A13Q5J8X5 152 aa19.44■□□□□ 0.7
VPS33A-205ENST00000541169 FYB2Q5VWT5 728 aa19.44■□□□□ 0.7
VPS33A-205ENST00000541169 LRRC31Q6UY01 552 aa19.44■□□□□ 0.7
VPS33A-205ENST00000541169 SPC24Q8NBT2 197 aa19.44■□□□□ 0.7
VPS33A-205ENST00000541169 CCDC112Q8NEF3 446 aa19.44■□□□□ 0.7
VPS33A-205ENST00000541169 FLCNQ8NFG4 579 aa19.44■□□□□ 0.7
VPS33A-205ENST00000541169 TTC8Q8TAM2 541 aa19.44■□□□□ 0.7
VPS33A-205ENST00000541169 CLDN23Q96B33 292 aa19.44■□□□□ 0.7
VPS33A-205ENST00000541169 PPP1R9BQ96SB3 815 aa19.44■□□□□ 0.7
VPS33A-205ENST00000541169 FBXO10Q9UK96 956 aa19.44■□□□□ 0.7
VPS33A-205ENST00000541169 SLC27A6Q9Y2P4 619 aa19.44■□□□□ 0.7
VPS33A-205ENST00000541169 CUL9Q8IWT3 2517 aa19.43■□□□□ 0.7
VPS33A-205ENST00000541169 FAM170AA1A519 330 aa19.43■□□□□ 0.7
VPS33A-205ENST00000541169 PAGE1O75459 146 aa19.43■□□□□ 0.7
VPS33A-205ENST00000541169 APODP05090 189 aa19.43■□□□□ 0.7
VPS33A-205ENST00000541169 TACR2P21452 398 aa19.43■□□□□ 0.7
VPS33A-205ENST00000541169 ADRA1BP35368 520 aa19.43■□□□□ 0.7
VPS33A-205ENST00000541169 PCK1P35558 622 aa19.43■□□□□ 0.7
VPS33A-205ENST00000541169 OPRD1P41143 372 aa19.43■□□□□ 0.7
VPS33A-205ENST00000541169 TNFRSF4P43489 277 aa19.43■□□□□ 0.7
VPS33A-205ENST00000541169 SOX9P48436 509 aa19.43■□□□□ 0.7
VPS33A-205ENST00000541169 GALK1P51570 392 aa19.43■□□□□ 0.7
VPS33A-205ENST00000541169 NRG1Q02297 640 aaPredicted RBP19.43■□□□□ 0.7
VPS33A-205ENST00000541169 SCAPQ12770 1279 aa19.43■□□□□ 0.7
VPS33A-205ENST00000541169 PON2Q15165 354 aa19.43■□□□□ 0.7
VPS33A-205ENST00000541169 TCEAL1Q15170 157 aa19.43■□□□□ 0.7
VPS33A-205ENST00000541169 CDO1Q16878 200 aa19.43■□□□□ 0.7
VPS33A-205ENST00000541169 GAB4Q2WGN9 574 aa19.43■□□□□ 0.7
VPS33A-205ENST00000541169 MAMSTRQ6ZN01 415 aa19.43■□□□□ 0.7
VPS33A-205ENST00000541169 CHSY1Q86X52 802 aa19.43■□□□□ 0.7
VPS33A-205ENST00000541169 PSTKQ8IV42 348 aaKnown RBP19.43■□□□□ 0.7
VPS33A-205ENST00000541169 NIPA2Q8N8Q9 360 aa19.43■□□□□ 0.7
VPS33A-205ENST00000541169 NUP85Q9BW27 656 aa19.43■□□□□ 0.7
VPS33A-205ENST00000541169 EPN1Q9Y6I3 576 aaPredicted RBP19.43■□□□□ 0.7
VPS33A-205ENST00000541169 CCP110O43303 1012 aa19.42■□□□□ 0.7
VPS33A-205ENST00000541169 ATMINO43313 823 aaPredicted RBP19.42■□□□□ 0.7
VPS33A-205ENST00000541169 TIMM44O43615 452 aa19.42■□□□□ 0.7
VPS33A-205ENST00000541169 ATG13O75143 517 aa19.42■□□□□ 0.7
VPS33A-205ENST00000541169 TULP3O75386 442 aa19.42■□□□□ 0.7
VPS33A-205ENST00000541169 NDUFA10O95299 355 aa19.42■□□□□ 0.7
VPS33A-205ENST00000541169 TFE3P19532 575 aaPredicted RBP19.42■□□□□ 0.7
VPS33A-205ENST00000541169 HTR7P34969 479 aa19.42■□□□□ 0.7
VPS33A-205ENST00000541169 ARHGAP25P42331 645 aa19.42■□□□□ 0.7
VPS33A-205ENST00000541169 DGKGP49619 791 aa19.42■□□□□ 0.7
VPS33A-205ENST00000541169 ZNF135P52742 658 aaPredicted RBP19.42■□□□□ 0.7
VPS33A-205ENST00000541169 HDAC4P56524 1084 aa19.42■□□□□ 0.7
VPS33A-205ENST00000541169 KRT83P78385 493 aa19.42■□□□□ 0.7
VPS33A-205ENST00000541169 C15orf59Q2T9L4 293 aaPredicted RBP19.42■□□□□ 0.7
VPS33A-205ENST00000541169 C5orf22Q49AR2 442 aa19.42■□□□□ 0.7
VPS33A-205ENST00000541169 HSF5Q4G112 596 aaPredicted RBP19.42■□□□□ 0.7
VPS33A-205ENST00000541169 IER5LQ5T953 404 aa19.42■□□□□ 0.7
VPS33A-205ENST00000541169 RNF43Q68DV7 783 aa19.42■□□□□ 0.7
VPS33A-205ENST00000541169 NADSYN1Q6IA69 706 aa19.42■□□□□ 0.7
VPS33A-205ENST00000541169 GRAMD4Q6IC98 578 aa19.42■□□□□ 0.7
VPS33A-205ENST00000541169 SLFN11Q7Z7L1 901 aa19.42■□□□□ 0.7
VPS33A-205ENST00000541169 PRRX2Q99811 253 aa19.42■□□□□ 0.7
VPS33A-205ENST00000541169 PRMT1Q99873 361 aaKnown RBP19.42■□□□□ 0.7
VPS33A-205ENST00000541169 OSBPL2Q9H1P3 480 aa19.42■□□□□ 0.7
VPS33A-205ENST00000541169 ARHGEF4Q9NR80 690 aa19.42■□□□□ 0.7
VPS33A-205ENST00000541169 SPTLC3Q9NUV7 552 aa19.42■□□□□ 0.7
VPS33A-205ENST00000541169 DNAJC17Q9NVM6 304 aaKnown RBP19.42■□□□□ 0.7
VPS33A-205ENST00000541169 CALCOCO1Q9P1Z2 691 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms