RNA–Protein interactions for RNA: ENST00000541157.5

MRE11-210, Transcript of MRE11 homolog, double strand break repair nuclease, human

TSL 4

Gene MRE11, Length 594 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRE11-210	ENST00000541157	TTI1	O43156	1089 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	MSI1	O43347	362 aa	Known RBP	10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	TGM5	O43548	720 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	LIAS	O43766	372 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	HEXIM1	O94992	359 aa	Known RBP	10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	APOC2	P02655	101 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	CA3	P07451	260 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	RARG	P13631	454 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	DNAJB1	P25685	340 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	TNFRSF8	P28908	595 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	CA8	P35219	290 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	ARL4A	P40617	200 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	PTGIR	P43119	386 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	EPHB3	P54753	998 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	VSNL1	P62760	191 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	DYNLT1	P63172	113 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	SLC7A5	Q01650	507 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	SEMA3B	Q13214	749 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	PLD1	Q13393	1074 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	NNT	Q13423	1086 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	PPP2R5D	Q14738	602 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	BRD3	Q15059	726 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	SNX30	Q5VWJ9	437 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	SLC9A4	Q6AI14	798 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	DRICH1	Q6PGQ1	229 aa	Predicted RBP	10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	SPRED2	Q7Z698	418 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	JAML	Q86YT9	394 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	PYROXD2	Q8N2H3	581 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	ZNF276	Q8N554	614 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	PQLC3	Q8N755	202 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	MRPL43	Q8N983	215 aa	Known RBP	10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	PCDH19	Q8TAB3	1148 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	POF1B	Q8WVV4	589 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	CSPG4P5	Q96PW8	444 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	CDK5RAP1	Q96SZ6	601 aa	Known RBP	10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	MAK16	Q9BXY0	300 aa	Known RBP	10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	WDCP	Q9H6R7	721 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	PRDM16	Q9HAZ2	1276 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	ANLN	Q9NQW6	1124 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	TMPRSS4	Q9NRS4	437 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	ARHGEF38	Q9NXL2	777 aa		10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	CWC15	Q9P013	229 aa	Known RBP	10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	MAGED2	Q9UNF1	606 aa	Predicted RBP	10.37	□□□□□ -0.75
MRE11-210	ENST00000541157	ZNF840P	A6NDX5	716 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	HIDE1	A8MVS5	230 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	APOL1	O14791	398 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	ECEL1	O95672	775 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	C1R	P00736	705 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	SLC2A3	P11169	496 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	ZFX	P17010	805 aa	Predicted RBP	10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	TGM2	P21980	687 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	CCR1	P32246	355 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	HCAR3	P49019	387 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	ZNF135	P52742	658 aa	Predicted RBP	10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	VCP	P55072	806 aa	Known RBP	10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	ERVK-21	P61565	698 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	GUCY2D	Q02846	1103 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	TWF1	Q12792	350 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	SNX1	Q13596	522 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	TRIP4	Q15650	581 aa	Predicted RBP	10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	C10orf120	Q5SQS8	335 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	PLPP4	Q5VZY2	271 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	FBXO38	Q6PIJ6	1188 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	CCDC149	Q6ZUS6	474 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	SYDE1	Q6ZW31	735 aa	Predicted RBP	10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	ITIH5	Q86UX2	942 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	IFT20	Q8IY31	132 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	CCDC105	Q8IYK2	499 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	PLD5	Q8N7P1	536 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	SLC35B2	Q8TB61	432 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	ACTL9	Q8TC94	416 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	GRK7	Q8WTQ7	553 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	SEC14L1	Q92503	715 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	RNF34	Q969K3	372 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	PSMG2	Q969U7	264 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	HAUS1	Q96CS2	278 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	SLC39A13	Q96H72	371 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	ZNF512	Q96ME7	567 aa	Predicted RBP	10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	TGS1	Q96RS0	853 aa	Known RBP	10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	FAM118B	Q9BPY3	351 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	TRIM51	Q9BSJ1	452 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	C1QTNF2	Q9BXJ5	285 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	MAGEB5	Q9BZ81	275 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	TKTL2	Q9H0I9	626 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	RAB17	Q9H0T7	212 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	GDF3	Q9NR23	364 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	ARGLU1	Q9NWB6	273 aa	Predicted RBP	10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	MARCH2	Q9P0N8	246 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	SFMBT1	Q9UHJ3	866 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	FEZ2	Q9UHY8	353 aa	Predicted RBP	10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	RASAL2	Q9UJF2	1139 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	NUDT5	Q9UKK9	219 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	TLR6	Q9Y2C9	796 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	YBX2	Q9Y2T7	364 aa	Known RBP	10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	ASB3	Q9Y575	518 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	WASF2	Q9Y6W5	498 aa		10.36	□□□□□ -0.75
MRE11-210	ENST00000541157	CCDC151	A5D8V7	595 aa		10.35	□□□□□ -0.75
MRE11-210	ENST00000541157	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	10.35	□□□□□ -0.75
MRE11-210	ENST00000541157	KCNU1	A8MYU2	1149 aa		10.35	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms