RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 PAPSS1O43252 624 aaPredicted RBP12.66□□□□□ -0.38
NPC1-202ENST00000540608 SIN3BO75182 1162 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 USP1O94782 785 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 ZCCHC18P0CG32 403 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 SETSIPP0DME0 302 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 MYL4P12829 197 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 KCNA4P22459 653 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 GRK2P25098 689 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 PHKA2P46019 1235 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 IDH3AP50213 366 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 COPAP53621 1224 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 SNX16P57768 344 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 AMHR2Q16671 573 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 AP1ARQ63HQ0 302 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 HEATR6Q6AI08 1181 aaKnown RBP12.66□□□□□ -0.38
NPC1-202ENST00000540608 PGM2L1Q6PCE3 622 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 MTHFD1LQ6UB35 978 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 TTC30AQ86WT1 665 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 ZDHHC17Q8IUH5 632 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 FBXO16Q8IX29 292 aaPredicted RBP12.66□□□□□ -0.38
NPC1-202ENST00000540608 SMARCAD1Q9H4L7 1026 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 DHX35Q9H5Z1 703 aaKnown RBP12.66□□□□□ -0.38
NPC1-202ENST00000540608 HESX1Q9UBX0 185 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 GTF2IRD1Q9UHL9 959 aa12.66□□□□□ -0.38
NPC1-202ENST00000540608 IRF6O14896 467 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 GABBR2O75899 941 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 ADORA2AP29274 412 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 FDFT1P37268 417 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 POLE2P56282 527 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 PCLAFQ15004 111 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 KYAT1Q16773 422 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 INSCQ1MX18 579 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 LRRC8BQ6P9F7 803 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 RAPH1Q70E73 1250 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 MAVSQ7Z434 540 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 DHDDSQ86SQ9 333 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 PDSS2Q86YH6 399 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 ARHGAP18Q8N392 663 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 PPP4R1Q8TF05 950 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 CENPIQ92674 756 aaPredicted RBP12.65□□□□□ -0.38
NPC1-202ENST00000540608 TUBGCP5Q96RT8 1024 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 TXNRD2Q9NNW7 524 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 PAPPA2Q9BXP8 1791 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 ALOX15P16050 662 aaPredicted RBP12.65□□□□□ -0.38
NPC1-202ENST00000540608 TFE3P19532 575 aaPredicted RBP12.65□□□□□ -0.38
NPC1-202ENST00000540608 PTPN9P43378 593 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 BTKQ06187 659 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 NAB1Q13506 487 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 RALGPS1Q5JS13 557 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 CASC4Q6P4E1 433 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 DENND5BQ6ZUT9 1274 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 C10orf107Q8IVU9 208 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 SHKBP1Q8TBC3 707 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 ACTRT2Q8TDY3 377 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 CPB2Q96IY4 423 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 PPP1R16BQ96T49 567 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 SORT1Q99523 831 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 C11orf84Q9BUA3 381 aaPredicted RBP12.65□□□□□ -0.38
NPC1-202ENST00000540608 TRIM4Q9C037 500 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 PNPOQ9NVS9 261 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 MTMR10Q9NXD2 777 aa12.65□□□□□ -0.38
NPC1-202ENST00000540608 A0A0A0MRY4 1105 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 ZNF195O14628 629 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 DGKIO75912 1065 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 PROCP04070 461 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 PRKCGP05129 697 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 CCNIQ14094 377 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 Q3C1V9 767 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 ATG14Q6ZNE5 492 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 CCDC33Q8N5R6 958 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 POU5F2Q8N7G0 328 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 TFB1MQ8WVM0 346 aaKnown RBP12.64□□□□□ -0.39
NPC1-202ENST00000540608 HTR3CQ8WXA8 447 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 PYDC1Q8WXC3 89 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 CMTM5Q96DZ9 223 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 OTUD5Q96G74 571 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 SPATA13Q96N96 652 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 CSPG4P5Q96PW8 444 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 MPHOSPH6Q99547 160 aaKnown RBP12.64□□□□□ -0.39
NPC1-202ENST00000540608 MAGEB5Q9BZ81 275 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 RNPEPQ9H4A4 650 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 EBF3Q9H4W6 596 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 DTLQ9NZJ0 730 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 IL1RAPL1Q9NZN1 696 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 HACD1B0YJ81 288 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 C22orf31O95567 290 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 ITGA2BP08514 1039 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 PGAM1P18669 254 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 RAB27AP51159 221 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 INHBEP58166 350 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 ASPHQ12797 758 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 NCBP2-AS2Q69YL0 99 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 RNF111Q6ZNA4 994 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 ACOT1Q86TX2 421 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 RASSF3Q86WH2 238 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 IFNLR1Q8IU57 520 aaPredicted RBP12.64□□□□□ -0.39
NPC1-202ENST00000540608 HACE1Q8IYU2 909 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 OR6Y1Q8NGX8 325 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 JADE3Q92613 823 aa12.64□□□□□ -0.39
NPC1-202ENST00000540608 CLMNQ96JQ2 1002 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms