RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 RBPJLQ9UBG7 517 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 RIMS3Q9UJD0 308 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 KIAA1257Q9ULG3 409 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 STRIP2Q9ULQ0 834 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 MYRFQ9Y2G1 1151 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 ATP11BQ9Y2G3 1177 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 PCDHGA8Q9Y5G5 932 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 CPQQ9Y646 472 aa9.75□□□□□ -0.85
CTNNA1-243ENST00000540387 H3BMQ9 156 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 RGS13O14921 159 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 ATP2A1O14983 1001 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 GMNNO75496 209 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 OSBPP22059 807 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 ETV4P43268 484 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 AQP5P55064 265 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 TPTEP56180 551 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 TRIM71Q2Q1W2 868 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 AARS2Q5JTZ9 985 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 KAZNQ674X7 775 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 NSMFQ6X4W1 530 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 RNF19BQ6ZMZ0 732 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 SLC5A5Q92911 643 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 BTBD6Q96KE9 485 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 FBXL18Q96ME1 805 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 COG8Q96MW5 612 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 RILPQ96NA2 401 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 FAM111AQ96PZ2 611 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 IMPG2Q9BZV3 1241 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 B3GNT4Q9C0J1 378 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 R3HDMLQ9H3Y0 253 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 RIC8BQ9NVN3 520 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 COL20A1Q9P218 1284 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 TBC1D14Q9P2M4 693 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 CROCCQ5TZA2 2017 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 PTPRFP10586 1907 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 TMEM88BA6NKF7 163 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 SLC26A4O43511 780 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 LPXNO60711 386 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 ZC3H11AO75152 810 aaKnown RBP eCLIP9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 PIAS1O75925 651 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 TDP2O95551 362 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 FTLP02792 175 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 FYNP06241 537 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 KITP10721 976 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 CASP5P51878 434 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 RPS6P62753 249 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 AP3B2Q13367 1082 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 EFHC2Q5JST6 749 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 AGAP7PQ5VUJ5 663 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 DENND5BQ6ZUT9 1274 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 HEATR4Q86WZ0 1026 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 DEFB107AQ8IZN7 70 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 FBXW8Q8N3Y1 598 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 CCDC33Q8N5R6 958 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 MZB1Q8WU39 189 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 ALKBH8Q96BT7 664 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 ALPK1Q96QP1 1244 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 FOXP3Q9BZS1 431 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 TP63Q9H3D4 680 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 PPCSQ9HAB8 311 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 XPNPEP1Q9NQW7 623 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 FKBP14Q9NWM8 211 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 ANKMY1Q9P2S6 941 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 AGO2Q9UKV8 859 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 PCDHA2Q9Y5H9 948 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 RLFQ13129 1914 aa9.74□□□□□ -0.85
CTNNA1-243ENST00000540387 CENPBD1B2RD01 187 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 CNMDO75829 334 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 FOSP01100 380 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 DDX5P17844 614 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 EIF2AK2P19525 551 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 CXCR2P25025 360 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 COPAP53621 1224 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 UBXN2AP68543 259 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 GPC5P78333 572 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 GRM1Q13255 1194 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 SUZ12Q15022 739 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 TCEAL1Q15170 157 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 PCSK7Q16549 785 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 SCARA3Q6AZY7 606 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 TMEM126BQ8IUX1 230 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 NATD1Q8N6N6 113 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 ADAMTS16Q8TE57 1224 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 RMND5BQ96G75 393 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 ACAP3Q96P50 834 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 HERPUD2Q9BSE4 406 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 SPATC1LQ9H0A9 340 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 COPS7BQ9H9Q2 264 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 OLAHQ9NV23 265 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 MARCOQ9UEW3 520 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 ARIH1Q9Y4X5 557 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 PCNTO95613 3336 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 ZSCAN5BA6NJL1 495 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 TMCC2O75069 709 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 IFNA8P32881 189 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 IST1P53990 364 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 TXNL4AP83876 142 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 BAATQ14032 418 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 FRA10AC1Q70Z53 315 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms