RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 EXOC8Q8IYI6 725 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 DNAAF3Q8N9W5 541 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 MED10Q9BTT4 135 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 SLC4A5Q9BY07 1137 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 PHACTR1Q9C0D0 580 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 XAB2Q9HCS7 855 aaKnown RBP14.07□□□□□ -0.16
BNIP3-202ENST00000540159 SAR1AQ9NR31 198 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 TXNDC16Q9P2K2 825 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 C2CD2Q9Y426 696 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 RPS6KL1Q9Y6S9 549 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 BCLAF3A2AJT9 711 aaKnown RBP14.06□□□□□ -0.16
BNIP3-202ENST00000540159 UBTFL6P0CB48 400 aaPredicted RBP14.06□□□□□ -0.16
BNIP3-202ENST00000540159 CCR10P46092 362 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 SLC26A2P50443 739 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 MAP3K7CLP57077 242 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 LAMC2Q13753 1193 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 ITGA9Q13797 1035 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 PDE1CQ14123 709 aaPredicted RBP14.06□□□□□ -0.16
BNIP3-202ENST00000540159 FBXO47Q5MNV8 452 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 MAMDC4Q6UXC1 1216 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 TMEM110Q86TL2 294 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 CHSY1Q86X52 802 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 RNF169Q8NCN4 708 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 GSTCDQ8NEC7 633 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 OR6J1Q8NGC5 347 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 EDEM1Q92611 657 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 KCNN1Q92952 543 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 DCLRE1BQ9H816 532 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 XPNPEP3Q9NQH7 507 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 DLGAP2Q9P1A6 1054 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 HBS1LQ9Y450 684 aaKnown RBP14.06□□□□□ -0.16
BNIP3-202ENST00000540159 WDR90Q96KV7 1748 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 GOLGA8QA0A0J9YX86 632 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 GOLGA8OA6NCC3 632 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 GOLGA8NF8WBI6 632 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 PSMG1O95456 288 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 DESP17661 470 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 TYK2P29597 1187 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 ARRB2P32121 409 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 STILQ15468 1287 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 PKDCCQ504Y2 493 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 C1orf146Q5VVC0 180 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 C9orf57Q5W0N0 161 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 RPAINQ86UA6 219 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 KBTBD7Q8WVZ9 684 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 PYDC1Q8WXC3 89 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 ZNF778Q96MU6 729 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 ZNF670Q9BS34 389 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 ZFATQ9P243 1243 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 KPNA7A9QM74 516 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 NEMP1O14524 444 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 DNAJC6O75061 913 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 BPGMP07738 259 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 PRKCHP24723 683 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 MSX2P35548 267 aaPredicted RBP14.06□□□□□ -0.16
BNIP3-202ENST00000540159 OCRLQ01968 901 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 ATG16L1Q676U5 607 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 TMEM154Q6P9G4 183 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 RASSF3Q86WH2 238 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 KBTBD2Q8IY47 623 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 PLD6Q8N2A8 252 aaKnown RBP14.06□□□□□ -0.16
BNIP3-202ENST00000540159 SPATA6LQ8N4H0 392 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 ACVR1CQ8NER5 493 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 SLC7A14Q8TBB6 771 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 CELF6Q96J87 481 aaKnown RBP14.06□□□□□ -0.16
BNIP3-202ENST00000540159 KCNK16Q96T55 309 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 TMEM216Q9P0N5 145 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 KLHL8Q9P2G9 620 aaPredicted RBP14.06□□□□□ -0.16
BNIP3-202ENST00000540159 FETUBQ9UGM5 382 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 LNPEPQ9UIQ6 1025 aa14.06□□□□□ -0.16
BNIP3-202ENST00000540159 TRIP12Q14669 1992 aaPredicted RBP14.05□□□□□ -0.16
BNIP3-202ENST00000540159 ZCCHC18P0CG32 403 aa14.05□□□□□ -0.16
BNIP3-202ENST00000540159 GLRBP48167 497 aa14.05□□□□□ -0.16
BNIP3-202ENST00000540159 CCNHP51946 323 aaPredicted RBP14.05□□□□□ -0.16
BNIP3-202ENST00000540159 IRF9Q00978 393 aa14.05□□□□□ -0.16
BNIP3-202ENST00000540159 HIC1Q14526 733 aa14.05□□□□□ -0.16
BNIP3-202ENST00000540159 RIPOR1Q6ZS17 1223 aa14.05□□□□□ -0.16
BNIP3-202ENST00000540159 BEST2Q8NFU1 509 aa14.05□□□□□ -0.16
BNIP3-202ENST00000540159 ZNF669Q96BR6 464 aaPredicted RBP14.05□□□□□ -0.16
BNIP3-202ENST00000540159 MFSD3Q96ES6 412 aa14.05□□□□□ -0.16
BNIP3-202ENST00000540159 SYT15Q9BQS2 421 aa14.05□□□□□ -0.16
BNIP3-202ENST00000540159 ANLNQ9NQW6 1124 aa14.05□□□□□ -0.16
BNIP3-202ENST00000540159 ADARB2Q9NS39 739 aaKnown RBP14.05□□□□□ -0.16
BNIP3-202ENST00000540159 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.05□□□□□ -0.164e-6■■■■□ 25.3
BNIP3-202ENST00000540159 PCDHA11Q9Y5I1 949 aa14.05□□□□□ -0.16
BNIP3-202ENST00000540159 ASB14A6NK59 587 aa14.05□□□□□ -0.16
BNIP3-202ENST00000540159 E9PBE3 544 aa14.05□□□□□ -0.16
BNIP3-202ENST00000540159 KLHL41O60662 606 aa14.05□□□□□ -0.16
BNIP3-202ENST00000540159 SNAI1O95863 264 aaPredicted RBP14.05□□□□□ -0.16
BNIP3-202ENST00000540159 AVPR1AP37288 418 aa14.05□□□□□ -0.16
BNIP3-202ENST00000540159 BEX3Q00994 111 aa14.05□□□□□ -0.16
BNIP3-202ENST00000540159 BST2Q10589 180 aaKnown RBP14.05□□□□□ -0.16
BNIP3-202ENST00000540159 TEX44Q53QW1 395 aa14.05□□□□□ -0.16
BNIP3-202ENST00000540159 IL31Q6EBC2 164 aa14.05□□□□□ -0.16
BNIP3-202ENST00000540159 LRRC74BQ6ZQY2 392 aa14.05□□□□□ -0.16
BNIP3-202ENST00000540159 EMCNQ9ULC0 261 aa14.05□□□□□ -0.16
BNIP3-202ENST00000540159 PPP2R3BQ9Y5P8 575 aa14.05□□□□□ -0.16
BNIP3-202ENST00000540159 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.04□□□□□ -0.16
BNIP3-202ENST00000540159 SMIM28A0A1B0GU29 152 aa14.04□□□□□ -0.16
BNIP3-202ENST00000540159 MDM4O15151 490 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms