RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 TTC25Q96NG3 672 aa23.17■■□□□ 1.3
HOMER3-204ENST00000539827 EPAS1Q99814 870 aa23.17■■□□□ 1.3
HOMER3-204ENST00000539827 CAPS2Q9BXY5 557 aa23.17■■□□□ 1.3
HOMER3-204ENST00000539827 SIK2Q9H0K1 926 aa23.17■■□□□ 1.3
HOMER3-204ENST00000539827 VPS37BQ9H9H4 285 aa23.17■■□□□ 1.3
HOMER3-204ENST00000539827 ARHGEF38Q9NXL2 777 aa23.17■■□□□ 1.3
HOMER3-204ENST00000539827 CDY1Q9Y6F8 540 aa23.17■■□□□ 1.3
HOMER3-204ENST00000539827 SMAPO00193 183 aa23.16■■□□□ 1.3
HOMER3-204ENST00000539827 CHADO15335 359 aa23.16■■□□□ 1.3
HOMER3-204ENST00000539827 ADAM12O43184 909 aa23.16■■□□□ 1.3
HOMER3-204ENST00000539827 METTL18O95568 372 aa23.16■■□□□ 1.3
HOMER3-204ENST00000539827 ITGB8P26012 769 aa23.16■■□□□ 1.3
HOMER3-204ENST00000539827 SPOUT1Q5T280 376 aaKnown RBP23.16■■□□□ 1.3
HOMER3-204ENST00000539827 MON1AQ86VX9 555 aa23.16■■□□□ 1.3
HOMER3-204ENST00000539827 CCNYQ8ND76 341 aa23.16■■□□□ 1.3
HOMER3-204ENST00000539827 SPPL2BQ8TCT7 592 aa23.16■■□□□ 1.3
HOMER3-204ENST00000539827 PRDM12Q9H4Q4 367 aa23.16■■□□□ 1.3
HOMER3-204ENST00000539827 PRDM5Q9NQX1 630 aaPredicted RBP23.16■■□□□ 1.3
HOMER3-204ENST00000539827 C5orf60A6NFR6 353 aa23.16■■□□□ 1.3
HOMER3-204ENST00000539827 LRIG2O94898 1065 aa23.16■■□□□ 1.3
HOMER3-204ENST00000539827 HAPLN1P10915 354 aaPredicted RBP23.16■■□□□ 1.3
HOMER3-204ENST00000539827 RPL17P18621 184 aaKnown RBP23.16■■□□□ 1.3
HOMER3-204ENST00000539827 DUSP4Q13115 394 aa23.16■■□□□ 1.3
HOMER3-204ENST00000539827 PDK1Q15118 436 aa23.16■■□□□ 1.3
HOMER3-204ENST00000539827 ARMC5Q96C12 935 aa23.16■■□□□ 1.3
HOMER3-204ENST00000539827 VN1R3Q9BXE9 311 aa23.16■■□□□ 1.3
HOMER3-204ENST00000539827 KLC2Q9H0B6 622 aa23.16■■□□□ 1.3
HOMER3-204ENST00000539827 A0A087WUV0 522 aaPredicted RBP23.15■■□□□ 1.3
HOMER3-204ENST00000539827 ABHD2P08910 425 aa23.15■■□□□ 1.3
HOMER3-204ENST00000539827 YWHAQP27348 245 aa23.15■■□□□ 1.3
HOMER3-204ENST00000539827 PPP2R2AP63151 447 aa23.15■■□□□ 1.3
HOMER3-204ENST00000539827 GNGT1P63211 74 aa23.15■■□□□ 1.3
HOMER3-204ENST00000539827 PRKD1Q15139 912 aaPredicted RBP23.15■■□□□ 1.3
HOMER3-204ENST00000539827 EMC10Q5UCC4 262 aa23.15■■□□□ 1.3
HOMER3-204ENST00000539827 DENND5BQ6ZUT9 1274 aa23.15■■□□□ 1.3
HOMER3-204ENST00000539827 FBXO22Q8NEZ5 403 aa23.15■■□□□ 1.3
HOMER3-204ENST00000539827 FBXO32Q969P5 355 aa23.15■■□□□ 1.3
HOMER3-204ENST00000539827 WDR83Q9BRX9 315 aaKnown RBP23.15■■□□□ 1.3
HOMER3-204ENST00000539827 OSBPL2Q9H1P3 480 aa23.15■■□□□ 1.3
HOMER3-204ENST00000539827 SEPT10Q9P0V9 454 aa23.15■■□□□ 1.3
HOMER3-204ENST00000539827 CTNNAL1Q9UBT7 734 aa23.15■■□□□ 1.3
HOMER3-204ENST00000539827 PLXNA3P51805 1871 aa23.15■■□□□ 1.3
HOMER3-204ENST00000539827 E7ESA3 106 aa23.14■■□□□ 1.3
HOMER3-204ENST00000539827 F5H423 210 aaPredicted RBP23.14■■□□□ 1.3
HOMER3-204ENST00000539827 SRGAP2BP0DMP2 458 aa23.14■■□□□ 1.3
HOMER3-204ENST00000539827 EPHB2P29323 1055 aa23.14■■□□□ 1.3
HOMER3-204ENST00000539827 RFC2P35250 354 aa23.14■■□□□ 1.3
HOMER3-204ENST00000539827 DEFB103AP81534 67 aa23.14■■□□□ 1.3
HOMER3-204ENST00000539827 BRMS1LQ5PSV4 323 aa23.14■■□□□ 1.3
HOMER3-204ENST00000539827 ARHGEF18Q6ZSZ5 1173 aa23.14■■□□□ 1.3
HOMER3-204ENST00000539827 PDIK1LQ8N165 341 aa23.14■■□□□ 1.3
HOMER3-204ENST00000539827 NPWQ8N729 165 aa23.14■■□□□ 1.3
HOMER3-204ENST00000539827 FBXO36Q8NEA4 188 aa23.14■■□□□ 1.3
HOMER3-204ENST00000539827 GIPC2Q8TF65 315 aa23.14■■□□□ 1.3
HOMER3-204ENST00000539827 PYROXD1Q8WU10 500 aa23.14■■□□□ 1.3
HOMER3-204ENST00000539827 P2RY11Q96G91 374 aa23.14■■□□□ 1.3
HOMER3-204ENST00000539827 IGSF21Q96ID5 467 aa23.14■■□□□ 1.3
HOMER3-204ENST00000539827 SERPINB12Q96P63 405 aa23.14■■□□□ 1.3
HOMER3-204ENST00000539827 IL37Q9NZH6 218 aa23.14■■□□□ 1.3
HOMER3-204ENST00000539827 TRIM43BA6NCK2 446 aa23.14■■□□□ 1.29
HOMER3-204ENST00000539827 C2CD2LO14523 706 aa23.14■■□□□ 1.29
HOMER3-204ENST00000539827 EIF3HO15372 352 aaKnown RBP eCLIP23.14■■□□□ 1.29
HOMER3-204ENST00000539827 PAGE1O75459 146 aa23.14■■□□□ 1.29
HOMER3-204ENST00000539827 AGTP01019 485 aa23.14■■□□□ 1.29
HOMER3-204ENST00000539827 CSF2RAP15509 400 aa23.14■■□□□ 1.29
HOMER3-204ENST00000539827 CCR1P32246 355 aa23.14■■□□□ 1.29
HOMER3-204ENST00000539827 GPX6P59796 221 aa23.14■■□□□ 1.29
HOMER3-204ENST00000539827 STAT4Q14765 748 aa23.14■■□□□ 1.29
HOMER3-204ENST00000539827 USP41Q3LFD5 358 aa23.14■■□□□ 1.29
HOMER3-204ENST00000539827 CCDC38Q502W7 563 aa23.14■■□□□ 1.29
HOMER3-204ENST00000539827 ANKRD20A2Q5SQ80 823 aa23.14■■□□□ 1.29
HOMER3-204ENST00000539827 ANKRD20A1Q5TYW2 823 aa23.14■■□□□ 1.29
HOMER3-204ENST00000539827 ANKRD20A3Q5VUR7 823 aa23.14■■□□□ 1.29
HOMER3-204ENST00000539827 PDZD4Q76G19 769 aaPredicted RBP23.14■■□□□ 1.29
HOMER3-204ENST00000539827 ARFGAP2Q8N6H7 521 aa23.14■■□□□ 1.29
HOMER3-204ENST00000539827 TOP1MTQ969P6 601 aa23.14■■□□□ 1.29
HOMER3-204ENST00000539827 TRIM43Q96BQ3 446 aaPredicted RBP23.14■■□□□ 1.29
HOMER3-204ENST00000539827 PKNOX2Q96KN3 472 aa23.14■■□□□ 1.29
HOMER3-204ENST00000539827 CCDC77Q9BR77 488 aa23.14■■□□□ 1.29
HOMER3-204ENST00000539827 CEP41Q9BYV8 373 aa23.14■■□□□ 1.29
HOMER3-204ENST00000539827 ZMYND8Q9ULU4 1186 aaPredicted RBP23.14■■□□□ 1.29
HOMER3-204ENST00000539827 CLUHO75153 1309 aa23.13■■□□□ 1.29
HOMER3-204ENST00000539827 PPP1R12AO14974 1030 aaPredicted RBP23.13■■□□□ 1.29
HOMER3-204ENST00000539827 EFEMP2O95967 443 aa23.13■■□□□ 1.29
HOMER3-204ENST00000539827 MOCS2O96007 188 aaPredicted RBP23.13■■□□□ 1.29
HOMER3-204ENST00000539827 GUCY1A3Q02108 690 aa23.13■■□□□ 1.29
HOMER3-204ENST00000539827 PSMD5Q16401 504 aa23.13■■□□□ 1.29
HOMER3-204ENST00000539827 MFSD5Q6N075 450 aa23.13■■□□□ 1.29
HOMER3-204ENST00000539827 RWDD4Q6NW29 188 aaKnown RBP23.13■■□□□ 1.29
HOMER3-204ENST00000539827 C4orf22Q6V702 233 aa23.13■■□□□ 1.29
HOMER3-204ENST00000539827 VPS52Q8N1B4 723 aa23.13■■□□□ 1.29
HOMER3-204ENST00000539827 ARHGAP18Q8N392 663 aa23.13■■□□□ 1.29
HOMER3-204ENST00000539827 ANKLE1Q8NAG6 615 aa23.13■■□□□ 1.29
HOMER3-204ENST00000539827 PHACTR1Q9C0D0 580 aa23.13■■□□□ 1.29
HOMER3-204ENST00000539827 COL4A6Q14031 1691 aa23.13■■□□□ 1.29
HOMER3-204ENST00000539827 A0A0A0MRY4 1105 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 WDR27A2RRH5 827 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 SHOX2O60902 331 aaPredicted RBP23.12■■□□□ 1.29
HOMER3-204ENST00000539827 AVILO75366 819 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 TCEA3O75764 348 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms