RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 RFX8Q6ZV50 586 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 SLC35F5Q8WV83 523 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 HTR3CQ8WXA8 447 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 HAPLN3Q96S86 360 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 C11orf84Q9BUA3 381 aaPredicted RBP13.64□□□□□ -0.23
UBE3B-209ENST00000539584 ZNF395Q9H8N7 513 aaPredicted RBP13.64□□□□□ -0.23
UBE3B-209ENST00000539584 PIDD1Q9HB75 910 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 STK32BQ9NY57 414 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 HESX1Q9UBX0 185 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 EMCNQ9ULC0 261 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 ANK1P16157 1881 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 SF3B1O75533 1304 aaKnown RBP eCLIP13.64□□□□□ -0.23
UBE3B-209ENST00000539584 TMEM114B3SHH9 223 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 B4GALT5O43286 388 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 DGKIO75912 1065 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 PROCP04070 461 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 ITGA2BP08514 1039 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 GP5P40197 560 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 PDE1BQ01064 536 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 FSTL1Q12841 308 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 ORC1Q13415 861 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 PDPK2PQ6A1A2 396 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 EFCAB12Q6NXP0 572 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 KCNT2Q6UVM3 1135 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 MPP5Q8N3R9 675 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 FBXW8Q8N3Y1 598 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 PHC3Q8NDX5 983 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 KLRG1Q96E93 195 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 TUBGCP5Q96RT8 1024 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 SERPINI1Q99574 410 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 CPNE1Q99829 537 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 RTKNQ9BST9 563 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 DNAI2Q9GZS0 605 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 XPNPEP3Q9NQH7 507 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 C6orf203Q9P0P8 240 aaPredicted RBP13.64□□□□□ -0.23
UBE3B-209ENST00000539584 MID2Q9UJV3 735 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 PRPF19Q9UMS4 504 aaKnown RBP13.64□□□□□ -0.23
UBE3B-209ENST00000539584 PPP2R3BQ9Y5P8 575 aa13.64□□□□□ -0.23
UBE3B-209ENST00000539584 SOWAHBA6NEL2 793 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 TPP1O14773 563 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 POLBP06746 335 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 RALBP11234 206 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 ADSLP30566 484 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-209ENST00000539584 MTTPP55157 894 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 SLC25A3Q00325 362 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 GOLGA7BQ2TAP0 167 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 PPP6R3Q5H9R7 873 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-209ENST00000539584 SPANXN3Q5MJ09 141 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 ZCCHC23Q6ZST2 131 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 SLC26A9Q7LBE3 791 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 STRADAQ7RTN6 431 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 UNC93AQ86WB7 457 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 SLC26A7Q8TE54 656 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 KHSRPQ92945 711 aaKnown RBP eCLIP13.63□□□□□ -0.23
UBE3B-209ENST00000539584 ZNF778Q96MU6 729 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 Q9H521 79 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 BTBD7Q9P203 1132 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 SCAF8Q9UPN6 1271 aaKnown RBP13.63□□□□□ -0.23
UBE3B-209ENST00000539584 DERAQ9Y315 318 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 PCDHB12Q9Y5F1 795 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-209ENST00000539584 PDLIM1O00151 329 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 ZNF195O14628 629 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 MAP3K13O43283 966 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 ITM2AO43736 263 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 ZCCHC18P0CG32 403 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 DPEP1P16444 411 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 VCLP18206 1134 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 CYP3A5P20815 502 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 ARL4AP40617 200 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 MAGEA12P43365 314 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 GLUD2P49448 558 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 PRKAA2P54646 552 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 RPL10AP62906 217 aaKnown RBP13.63□□□□□ -0.23
UBE3B-209ENST00000539584 ITGA9Q13797 1035 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 CA9Q16790 459 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 SLC10A6Q3KNW5 377 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 ZNF484Q5JVG2 852 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 ARHGAP17Q68EM7 881 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 PMF1Q6P1K2 205 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 SETD3Q86TU7 594 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-209ENST00000539584 KBTBD6Q86V97 674 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 TMEM192Q8IY95 271 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 CATSPER1Q8NEC5 780 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 CSPG4P5Q96PW8 444 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 SORT1Q99523 831 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 GORASP1Q9BQQ3 440 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 DPP3Q9NY33 737 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 AP4E1Q9UPM8 1137 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 POMPQ9Y244 141 aa13.63□□□□□ -0.23
UBE3B-209ENST00000539584 WDR27A2RRH5 827 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 KPNA7A9QM74 516 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 GRAP2O75791 330 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 EGFRP00533 1210 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 MPOP05164 745 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 TYK2P29597 1187 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 SPRP35270 261 aaPredicted RBP13.62□□□□□ -0.23
UBE3B-209ENST00000539584 ACADSBP45954 432 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 RPL34P49207 117 aaKnown RBP13.62□□□□□ -0.23
UBE3B-209ENST00000539584 GBE1Q04446 702 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms