RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 DNAJC17Q9NVM6 304 aaKnown RBP14.24□□□□□ -0.13
CD9-208ENST00000538834 POLR3BQ9NW08 1133 aaPredicted RBP14.24□□□□□ -0.13
CD9-208ENST00000538834 TMEM51Q9NW97 253 aa14.24□□□□□ -0.13
CD9-208ENST00000538834 PLK2Q9NYY3 685 aa14.24□□□□□ -0.13
CD9-208ENST00000538834 XPO7Q9UIA9 1087 aaKnown RBP14.24□□□□□ -0.13
CD9-208ENST00000538834 ITIH6Q6UXX5 1313 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 GOLGA6L7A0A1B0GV03 622 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 LRRC53A6NM62 1247 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 CAPN9O14815 690 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 GRAP2O75791 330 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 SERPINC1P01008 464 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 SLC11A2P49281 568 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 DGKGP49619 791 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 CDK17Q00537 523 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 DMC1Q14565 340 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 ARID5BQ14865 1188 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 CRY1Q16526 586 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 GEN1Q17RS7 908 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 SLC25A52Q3SY17 297 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 ZC3H12AQ5D1E8 599 aaKnown RBP14.23□□□□□ -0.13
CD9-208ENST00000538834 MS4A13Q5J8X5 152 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 PPP1R15BQ5SWA1 713 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 HGSNATQ68CP4 663 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 RFWD3Q6PCD5 774 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 TMEM92Q6UXU6 159 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 CACNA2D4Q7Z3S7 1137 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 ZNF683Q8IZ20 524 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 CENPIQ92674 756 aaPredicted RBP14.23□□□□□ -0.13
CD9-208ENST00000538834 SYN2Q92777 582 aaPredicted RBP14.23□□□□□ -0.13
CD9-208ENST00000538834 ACDQ96AP0 544 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 TMA16Q96EY4 203 aaKnown RBP14.23□□□□□ -0.13
CD9-208ENST00000538834 NUP58Q9BVL2 599 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 EPC1Q9H2F5 836 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 ANLNQ9NQW6 1124 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 ARHGEF38Q9NXL2 777 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.23□□□□□ -0.13
CD9-208ENST00000538834 R4GN57 208 aa14.23□□□□□ -0.13
CD9-208ENST00000538834 PRR23AA6NEV1 266 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 C2CD4BA6NLJ0 364 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 SGK1O00141 431 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 HRO43593 1189 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 CCDC172P0C7W6 258 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 SLC2A3P11169 496 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 GZMAP12544 262 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 HLA-FP30511 346 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 CNR2P34972 360 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 KDSRQ06136 332 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 MTA1Q13330 715 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 NUMA1Q14980 2115 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 C2orf27AQ580R0 203 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 MMS22LQ6ZRQ5 1243 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 ASCL5Q7RTU5 278 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 LONP2Q86WA8 852 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 FIBINQ8TAL6 211 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 WFDC5Q8TCV5 224 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 IQCDQ96DY2 449 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 VCPIP1Q96JH7 1222 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 PCMTD1Q96MG8 357 aaPredicted RBP14.22□□□□□ -0.13
CD9-208ENST00000538834 GABRG3Q99928 467 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 NUCKS1Q9H1E3 243 aaKnown RBP14.22□□□□□ -0.13
CD9-208ENST00000538834 TSPY26PQ9H489 355 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 PIGVQ9NUD9 493 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 THAP10Q9P2Z0 257 aaPredicted RBP14.22□□□□□ -0.13
CD9-208ENST00000538834 CAPN11Q9UMQ6 739 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 DMXL1Q9Y485 3027 aa14.22□□□□□ -0.13
CD9-208ENST00000538834 LAMA1P25391 3075 aa14.21□□□□□ -0.13
CD9-208ENST00000538834 A0A1W2PQF6 199 aa14.21□□□□□ -0.13
CD9-208ENST00000538834 TBC1D3BA6NDS4 549 aa14.21□□□□□ -0.13
CD9-208ENST00000538834 CYBBP04839 570 aa14.21□□□□□ -0.13
CD9-208ENST00000538834 HNRNPH3P31942 346 aaKnown RBP14.21□□□□□ -0.13
CD9-208ENST00000538834 CCR1P32246 355 aa14.21□□□□□ -0.13
CD9-208ENST00000538834 GBP1P32455 592 aa14.21□□□□□ -0.13
CD9-208ENST00000538834 MRE11P49959 708 aa14.21□□□□□ -0.13
CD9-208ENST00000538834 TPM4P67936 248 aa14.21□□□□□ -0.13
CD9-208ENST00000538834 C1QBPQ07021 282 aaKnown RBP14.21□□□□□ -0.13
CD9-208ENST00000538834 BRMS1LQ5PSV4 323 aa14.21□□□□□ -0.13
CD9-208ENST00000538834 EGFLAMQ63HQ2 1017 aa14.21□□□□□ -0.13
CD9-208ENST00000538834 ACAD10Q6JQN1 1059 aa14.21□□□□□ -0.13
CD9-208ENST00000538834 ZC3H14Q6PJT7 736 aaKnown RBP14.21□□□□□ -0.13
CD9-208ENST00000538834 ZNF571Q7Z3V5 609 aaPredicted RBP14.21□□□□□ -0.13
CD9-208ENST00000538834 ADIPOR2Q86V24 386 aa14.21□□□□□ -0.13
CD9-208ENST00000538834 ALLCQ8N6M5 410 aa14.21□□□□□ -0.13
CD9-208ENST00000538834 TXNDC5Q8NBS9 432 aaKnown RBP14.21□□□□□ -0.13
CD9-208ENST00000538834 MSANTD4Q8NCY6 345 aa14.21□□□□□ -0.13
CD9-208ENST00000538834 C3orf20Q8ND61 904 aa14.21□□□□□ -0.13
CD9-208ENST00000538834 DDI1Q8WTU0 396 aa14.21□□□□□ -0.13
CD9-208ENST00000538834 ACOX2Q99424 681 aa14.21□□□□□ -0.13
CD9-208ENST00000538834 TBCBQ99426 244 aa14.21□□□□□ -0.13
CD9-208ENST00000538834 DDX50Q9BQ39 737 aaKnown RBP14.21□□□□□ -0.13
CD9-208ENST00000538834 PDCL3Q9H2J4 239 aa14.21□□□□□ -0.13
CD9-208ENST00000538834 DDIT4Q9NX09 232 aa14.21□□□□□ -0.13
CD9-208ENST00000538834 IFNKQ9P0W0 207 aa14.21□□□□□ -0.13
CD9-208ENST00000538834 SIGLEC16A6NMB1 481 aa14.2□□□□□ -0.14
CD9-208ENST00000538834 GOLGA6L19H0YKK7 550 aa14.2□□□□□ -0.14
CD9-208ENST00000538834 M0QYT0 321 aa14.2□□□□□ -0.14
CD9-208ENST00000538834 DDX3XO00571 662 aaKnown RBP eCLIP14.2□□□□□ -0.14
CD9-208ENST00000538834 NPC1O15118 1278 aa14.2□□□□□ -0.14
CD9-208ENST00000538834 TSPAN3O60637 253 aa14.2□□□□□ -0.14
CD9-208ENST00000538834 ADCY5O95622 1261 aa14.2□□□□□ -0.14
CD9-208ENST00000538834 F9P00740 461 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms