RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	RTN4	Q9NQC3	1192 aa	Known RBP	12.78	□□□□□ -0.36
CLTCL1-205	ENST00000538828	FAM207A	Q9NSI2	230 aa	Predicted RBP	12.78	□□□□□ -0.36
CLTCL1-205	ENST00000538828	ELOVL2	Q9NXB9	296 aa		12.78	□□□□□ -0.36
CLTCL1-205	ENST00000538828	NOCT	Q9UK39	431 aa	Known RBP	12.78	□□□□□ -0.36
CLTCL1-205	ENST00000538828	HCN2	Q9UL51	889 aa		12.78	□□□□□ -0.36
CLTCL1-205	ENST00000538828	STAP1	Q9ULZ2	295 aa		12.78	□□□□□ -0.36
CLTCL1-205	ENST00000538828	PAXBP1	Q9Y5B6	917 aa		12.78	□□□□□ -0.36
CLTCL1-205	ENST00000538828	RALGAPA1	Q6GYQ0	2036 aa		12.78	□□□□□ -0.36
CLTCL1-205	ENST00000538828		A0A1W2PQC6	194 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	KCNU1	A8MYU2	1149 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	TRIM24	O15164	1050 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	ZNF217	O75362	1048 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	RHOBTB1	O94844	696 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	ERBB2	P04626	1255 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	HOXB2	P14652	356 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	TGM1	P22735	817 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	P2RY2	P41231	377 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	DPP6	P42658	865 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	OXCT1	P55809	520 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	NOMO3	P69849	1222 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	IQCB1	Q15051	598 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	FILIP1L	Q4L180	1135 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	MS4A13	Q5J8X5	152 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	BRMS1L	Q5PSV4	323 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	OR6B2	Q6IFH4	312 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	PPP1R2P3	Q6NXS1	205 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	FAM183BP	Q6ZVS7	135 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	NOP9	Q86U38	636 aa	Known RBP	12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	SFTPA1	Q8IWL2	248 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	DHX40	Q8IX18	779 aa	Known RBP	12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	CHPF	Q8IZ52	775 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	DEFB106A	Q8N104	65 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	AHI1	Q8N157	1196 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	MDGA1	Q8NFP4	955 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	NPY6R	Q99463	290 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	EDEM3	Q9BZQ6	932 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	FBRS	Q9HAH7	460 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	PLK2	Q9NYY3	685 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	CKAP5	Q14008	2032 aa		12.77	□□□□□ -0.37
CLTCL1-205	ENST00000538828	ABCA7	Q8IZY2	2146 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828		A0A1W2PQF6	199 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	PRR5-ARHGAP8	B1AHC4	643 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	EPN2	O95208	641 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	ATP5B	P06576	529 aa	Known RBP	12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	PNMA6A	P0CW24	399 aa	Predicted RBP	12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	PABPC1	P11940	636 aa	Known RBP	12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	ABCB4	P21439	1286 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	MMP8	P22894	467 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	HLA-F	P30511	346 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	ARHGAP8	P85298	464 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	LMNB2	Q03252	620 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	SLC12A1	Q13621	1099 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	STARD3	Q14849	445 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	ARID5B	Q14865	1188 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	ELF2	Q15723	593 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	CSRP2	Q16527	193 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	GEN1	Q17RS7	908 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	SLC25A52	Q3SY17	297 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	PLK5	Q496M5	336 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	C5orf22	Q49AR2	442 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	EGFLAM	Q63HQ2	1017 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	NADSYN1	Q6IA69	706 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	ANO7	Q6IWH7	933 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	PRR23B	Q6ZRT6	265 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	BNIPL	Q7Z465	357 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	XYLT1	Q86Y38	959 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	PASD1	Q8IV76	773 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	CCDC117	Q8IWD4	279 aa	Predicted RBP	12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	FAM160A2	Q8N612	972 aa	Predicted RBP	12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	SPACA7	Q96KW9	195 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	PPP1R9B	Q96SB3	815 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	PRMT1	Q99873	361 aa	Known RBP	12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	DDIT4	Q9NX09	232 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828	TJP2	Q9UDY2	1190 aa		12.76	□□□□□ -0.37
CLTCL1-205	ENST00000538828		A0A1B0GTH6	734 aa		12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	EPHB6	O15197	1021 aa		12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	GFPT2	O94808	682 aa		12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	ASL	P04424	464 aa		12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	MME	P08473	750 aa		12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	UNG	P13051	313 aa	Predicted RBP	12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	ATP1A3	P13637	1013 aa		12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	FER	P16591	822 aa		12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	SLC6A4	P31645	630 aa		12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	CXCR3	P49682	368 aa		12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	VASP	P50552	380 aa	Predicted RBP	12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	TPM4	P67936	248 aa		12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	FMO1	Q01740	532 aa		12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	CENPC	Q03188	943 aa		12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	TAF5	Q15542	800 aa		12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	ZC3H12A	Q5D1E8	599 aa	Known RBP	12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	FIGN	Q5HY92	759 aa		12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	PMS2CL	Q68D20	193 aa		12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	SLC36A4	Q6YBV0	504 aa		12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	BHMT	Q93088	406 aa		12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	TTC17	Q96AE7	1141 aa		12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	IQCD	Q96DY2	449 aa		12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	LMLN	Q96KR4	655 aa		12.75	□□□□□ -0.37
CLTCL1-205	ENST00000538828	C1orf74	Q96LT6	269 aa		12.75	□□□□□ -0.37

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