RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 ARHGEF37A1IGU5 675 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 B3GAT3O94766 335 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 ALDH1A1P00352 501 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 SNRPAP09012 282 aaKnown RBP16.15■□□□□ 0.18
MKS1-204ENST00000537529 IBSPP21815 317 aaPredicted RBP16.15■□□□□ 0.18
MKS1-204ENST00000537529 ADRA1DP25100 572 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 HCAR3P49019 387 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 ZNF135P52742 658 aaPredicted RBP16.15■□□□□ 0.18
MKS1-204ENST00000537529 SLC18A2Q05940 514 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 TUSC3Q13454 348 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 FAM133BQ5BKY9 247 aaKnown RBP16.15■□□□□ 0.18
MKS1-204ENST00000537529 INTS6LQ5JSJ4 861 aaKnown RBP16.15■□□□□ 0.18
MKS1-204ENST00000537529 PCSK9Q8NBP7 692 aaKnown RBP16.15■□□□□ 0.18
MKS1-204ENST00000537529 CCNYQ8ND76 341 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 ADAM32Q8TC27 787 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 SPOCK2Q92563 424 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 ZNF75CPQ92670 426 aaPredicted RBP16.15■□□□□ 0.18
MKS1-204ENST00000537529 ADAM2Q99965 735 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 RTP3Q9BQQ7 232 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 PLAC1Q9HBJ0 212 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.15■□□□□ 0.18
MKS1-204ENST00000537529 SEPT10Q9P0V9 454 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 NOD1Q9Y239 953 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 TSC2P49815 1807 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 I3L4J1 428 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 CCND3P30281 292 aaPredicted RBP16.14■□□□□ 0.17
MKS1-204ENST00000537529 NEK3P51956 506 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 SEMA3BQ13214 749 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 FAM171BQ6P995 826 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 CCDC63Q8NA47 563 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 STAMBPL1Q96FJ0 436 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 SERAC1Q96JX3 654 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 ZIC5Q96T25 663 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 TRIM62Q9BVG3 475 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 VPS11Q9H270 941 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 PRDM12Q9H4Q4 367 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 RXFP1Q9HBX9 757 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 SLC40A1Q9NP59 571 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 DMAP1Q9NPF5 467 aaPredicted RBP16.14■□□□□ 0.17
MKS1-204ENST00000537529 INPP5FQ9Y2H2 1132 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 FAM159BA6NKW6 160 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 TRIM49D1C9J1S8 452 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 FAM155BO75949 473 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 UBOX5O94941 541 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 PRKAR2AP13861 404 aaKnown RBP16.14■□□□□ 0.17
MKS1-204ENST00000537529 BRCC3P46736 316 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 MAPRE1Q15691 268 aaKnown RBP16.14■□□□□ 0.17
MKS1-204ENST00000537529 PARP6Q2NL67 630 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 FAM26DQ5JW98 314 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 CCSAPQ6IQ19 270 aaPredicted RBP16.14■□□□□ 0.17
MKS1-204ENST00000537529 BHLHA9Q7RTU4 235 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 SCML4Q8N228 414 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 MPP5Q8N3R9 675 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 MTBPQ96DY7 904 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 RHOBTB2Q9BYZ6 727 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 SLC17A7Q9P2U7 560 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 NR2E3Q9Y5X4 410 aa16.14■□□□□ 0.17
MKS1-204ENST00000537529 CXorf49A8MYA2 514 aaPredicted RBP16.13■□□□□ 0.17
MKS1-204ENST00000537529 M0QZQ0 153 aa16.13■□□□□ 0.17
MKS1-204ENST00000537529 NCAM2O15394 837 aa16.13■□□□□ 0.17
MKS1-204ENST00000537529 KRT38O76015 456 aa16.13■□□□□ 0.17
MKS1-204ENST00000537529 PYGBP11216 843 aa16.13■□□□□ 0.17
MKS1-204ENST00000537529 ERCC2P18074 760 aa16.13■□□□□ 0.17
MKS1-204ENST00000537529 CCDC15Q0P6D6 951 aa16.13■□□□□ 0.17
MKS1-204ENST00000537529 IFRD2Q12894 506 aaPredicted RBP16.13■□□□□ 0.17
MKS1-204ENST00000537529 GALNTL6Q49A17 601 aa16.13■□□□□ 0.17
MKS1-204ENST00000537529 PAN2Q504Q3 1202 aaKnown RBP16.13■□□□□ 0.17
MKS1-204ENST00000537529 FYB2Q5VWT5 728 aa16.13■□□□□ 0.17
MKS1-204ENST00000537529 STEAP4Q687X5 459 aa16.13■□□□□ 0.17
MKS1-204ENST00000537529 LRRC8BQ6P9F7 803 aa16.13■□□□□ 0.17
MKS1-204ENST00000537529 THEM5Q8N1Q8 247 aa16.13■□□□□ 0.17
MKS1-204ENST00000537529 RMDN2Q96LZ7 410 aa16.13■□□□□ 0.17
MKS1-204ENST00000537529 BRD8Q9H0E9 1235 aa16.13■□□□□ 0.17
MKS1-204ENST00000537529 SLCO1B3Q9NPD5 702 aa16.13■□□□□ 0.17
MKS1-204ENST00000537529 SDR42E2A6NKP2 422 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 FAM72CH0Y354 149 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 BDNFP23560 247 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 GRIA1P42261 906 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 SERPINB9P50453 376 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 WASHC5Q12768 1159 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 FAM72AQ5TYM5 149 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 PM20D1Q6GTS8 502 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 FAM72DQ6L9T8 149 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 SH2D5Q6ZV89 423 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 CYS1Q717R9 158 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 FAM72BQ86X60 149 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 CCNJLQ8IV13 435 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 RSPH1Q8WYR4 309 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 EDEM1Q92611 657 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 EPAS1Q99814 870 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 COLEC11Q9BWP8 271 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 IQCGQ9H095 443 aaKnown RBP16.12■□□□□ 0.17
MKS1-204ENST00000537529 IGSF9Q9P2J2 1179 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 GGT7Q9UJ14 662 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 SQORQ9Y6N5 450 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 USH1CQ9Y6N9 552 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 SRCAPQ6ZRS2 3230 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 CFAP73A6NFT4 308 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 F5H423 210 aaPredicted RBP16.12■□□□□ 0.17
MKS1-204ENST00000537529 COPEO14579 308 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms