RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 A0A1B0GTW7 788 aa8.81□□□□□ -1
USP28-203ENST00000537490 HAX1O00165 279 aa8.81□□□□□ -1
USP28-203ENST00000537490 PMM2O15305 246 aa8.81□□□□□ -1
USP28-203ENST00000537490 LATS1O95835 1130 aa8.81□□□□□ -1
USP28-203ENST00000537490 IGLV3-19P01714 112 aa8.81□□□□□ -1
USP28-203ENST00000537490 PAEPP09466 180 aa8.81□□□□□ -1
USP28-203ENST00000537490 ACADMP11310 421 aa8.81□□□□□ -1
USP28-203ENST00000537490 PABPC1P11940 636 aaKnown RBP8.81□□□□□ -1
USP28-203ENST00000537490 BMP6P22004 513 aa8.81□□□□□ -1
USP28-203ENST00000537490 SLC6A4P31645 630 aa8.81□□□□□ -1
USP28-203ENST00000537490 BNC1Q01954 994 aa8.81□□□□□ -1
USP28-203ENST00000537490 ARID5AQ03989 594 aa8.81□□□□□ -1
USP28-203ENST00000537490 SLC14A1Q13336 389 aa8.81□□□□□ -1
USP28-203ENST00000537490 CAMK2GQ13555 558 aaPredicted RBP8.81□□□□□ -1
USP28-203ENST00000537490 E2F5Q15329 346 aa8.81□□□□□ -1
USP28-203ENST00000537490 PTPRNQ16849 979 aa8.81□□□□□ -1
USP28-203ENST00000537490 PIK3R6Q5UE93 754 aa8.81□□□□□ -1
USP28-203ENST00000537490 MBLAC2Q68D91 279 aa8.81□□□□□ -1
USP28-203ENST00000537490 MSANTD2Q6P1R3 559 aa8.81□□□□□ -1
USP28-203ENST00000537490 RFWD3Q6PCD5 774 aa8.81□□□□□ -1
USP28-203ENST00000537490 RRAGAQ7L523 313 aa8.81□□□□□ -1
USP28-203ENST00000537490 FAM124AQ86V42 546 aa8.81□□□□□ -1
USP28-203ENST00000537490 ARHGEF19Q8IW93 802 aa8.81□□□□□ -1
USP28-203ENST00000537490 PPM1KQ8N3J5 372 aa8.81□□□□□ -1
USP28-203ENST00000537490 CHCHD4Q8N4Q1 142 aa8.81□□□□□ -1
USP28-203ENST00000537490 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.81□□□□□ -1
USP28-203ENST00000537490 OR2T3Q8NH03 318 aa8.81□□□□□ -1
USP28-203ENST00000537490 WFIKKN2Q8TEU8 576 aa8.81□□□□□ -1
USP28-203ENST00000537490 CLEC4CQ8WTT0 213 aa8.81□□□□□ -1
USP28-203ENST00000537490 MYEOVQ96EZ4 313 aa8.81□□□□□ -1
USP28-203ENST00000537490 DHTKD1Q96HY7 919 aaPredicted RBP8.81□□□□□ -1
USP28-203ENST00000537490 CEP63Q96MT8 703 aa8.81□□□□□ -1
USP28-203ENST00000537490 TIGD1Q96MW7 591 aa8.81□□□□□ -1
USP28-203ENST00000537490 NT5C1BQ96P26 610 aa8.81□□□□□ -1
USP28-203ENST00000537490 NUP58Q9BVL2 599 aa8.81□□□□□ -1
USP28-203ENST00000537490 LHX5Q9H2C1 402 aa8.81□□□□□ -1
USP28-203ENST00000537490 IL21RQ9HBE5 538 aa8.81□□□□□ -1
USP28-203ENST00000537490 EIF2B4Q9UI10 523 aaKnown RBP8.81□□□□□ -1
USP28-203ENST00000537490 GGA2Q9UJY4 613 aa8.81□□□□□ -1
USP28-203ENST00000537490 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.81□□□□□ -1
USP28-203ENST00000537490 MSRB2Q9Y3D2 182 aa8.81□□□□□ -1
USP28-203ENST00000537490 NFE2L3Q9Y4A8 694 aa8.81□□□□□ -1
USP28-203ENST00000537490 NEUROG3Q9Y4Z2 214 aa8.81□□□□□ -1
USP28-203ENST00000537490 SLCO1B1Q9Y6L6 691 aa8.81□□□□□ -1
USP28-203ENST00000537490 ADAMTS9Q9P2N4 1935 aa8.8□□□□□ -1
USP28-203ENST00000537490 PPP1R3GB7ZBB8 358 aa8.8□□□□□ -1
USP28-203ENST00000537490 M0QYV0 167 aa8.8□□□□□ -1
USP28-203ENST00000537490 PSMA7O14818 248 aa8.8□□□□□ -1
USP28-203ENST00000537490 BCAT2O15382 392 aaPredicted RBP8.8□□□□□ -1
USP28-203ENST00000537490 ACSL4O60488 711 aa8.8□□□□□ -1
USP28-203ENST00000537490 TBL1XO60907 577 aa8.8□□□□□ -1
USP28-203ENST00000537490 IGLV3-27P01718 113 aa8.8□□□□□ -1
USP28-203ENST00000537490 LTFP02788 710 aa8.8□□□□□ -1
USP28-203ENST00000537490 FYNP06241 537 aa8.8□□□□□ -1
USP28-203ENST00000537490 C7P10643 843 aa8.8□□□□□ -1
USP28-203ENST00000537490 CD70P32970 193 aa8.8□□□□□ -1
USP28-203ENST00000537490 ACSL1P33121 698 aa8.8□□□□□ -1
USP28-203ENST00000537490 TBX4P57082 545 aa8.8□□□□□ -1
USP28-203ENST00000537490 ZNF445P59923 1031 aa8.8□□□□□ -1
USP28-203ENST00000537490 RPS14P62263 151 aaKnown RBP8.8□□□□□ -1
USP28-203ENST00000537490 HNRNPDQ14103 355 aaKnown RBP8.8□□□□□ -1
USP28-203ENST00000537490 TRIP6Q15654 476 aaKnown RBP8.8□□□□□ -1
USP28-203ENST00000537490 CCDC40Q4G0X9 1142 aa8.8□□□□□ -1
USP28-203ENST00000537490 FNDC3BQ53EP0 1204 aaKnown RBP8.8□□□□□ -1
USP28-203ENST00000537490 FAM133BQ5BKY9 247 aaKnown RBP8.8□□□□□ -1
USP28-203ENST00000537490 NADSYN1Q6IA69 706 aa8.8□□□□□ -1
USP28-203ENST00000537490 KLHL10Q6JEL2 608 aa8.8□□□□□ -1
USP28-203ENST00000537490 TTI2Q6NXR4 508 aa8.8□□□□□ -1
USP28-203ENST00000537490 EHBP1Q8NDI1 1231 aa8.8□□□□□ -1
USP28-203ENST00000537490 C1orf216Q8TAB5 229 aa8.8□□□□□ -1
USP28-203ENST00000537490 IRGQQ8WZA9 623 aa8.8□□□□□ -1
USP28-203ENST00000537490 LMLNQ96KR4 655 aa8.8□□□□□ -1
USP28-203ENST00000537490 HSFY1Q96LI6 401 aa8.8□□□□□ -1
USP28-203ENST00000537490 KREMEN1Q96MU8 473 aa8.8□□□□□ -1
USP28-203ENST00000537490 GTPBP4Q9BZE4 634 aaKnown RBP8.8□□□□□ -1
USP28-203ENST00000537490 ZDHHC5Q9C0B5 715 aa8.8□□□□□ -1
USP28-203ENST00000537490 MIS12Q9H081 205 aa8.8□□□□□ -1
USP28-203ENST00000537490 MTG2Q9H4K7 406 aa8.8□□□□□ -1
USP28-203ENST00000537490 C6orf106Q9H6K1 298 aaPredicted RBP8.8□□□□□ -1
USP28-203ENST00000537490 GAREM1Q9H706 876 aa8.8□□□□□ -1
USP28-203ENST00000537490 PRSS16Q9NQE7 514 aa8.8□□□□□ -1
USP28-203ENST00000537490 STIM2Q9P246 746 aa8.8□□□□□ -1
USP28-203ENST00000537490 PLA2G4CQ9UP65 541 aa8.8□□□□□ -1
USP28-203ENST00000537490 CEP295Q9C0D2 2601 aa8.79□□□□□ -1
USP28-203ENST00000537490 A0A1B0GVT2 93 aa8.79□□□□□ -1
USP28-203ENST00000537490 FAM221BA6H8Z2 402 aa8.79□□□□□ -1
USP28-203ENST00000537490 TMEM8BA6NDV4 472 aa8.79□□□□□ -1
USP28-203ENST00000537490 SRRM3A6NNA2 597 aaPredicted RBP8.79□□□□□ -1
USP28-203ENST00000537490 H0Y626 953 aa8.79□□□□□ -1
USP28-203ENST00000537490 P4HA2O15460 535 aa8.79□□□□□ -1
USP28-203ENST00000537490 CBFA2T3O75081 653 aa8.79□□□□□ -1
USP28-203ENST00000537490 TRIM16O95361 564 aa8.79□□□□□ -1
USP28-203ENST00000537490 DLDP09622 509 aaKnown RBP8.79□□□□□ -1
USP28-203ENST00000537490 POLR2EP19388 210 aaKnown RBP8.79□□□□□ -1
USP28-203ENST00000537490 RDXP35241 583 aaKnown RBP8.79□□□□□ -1
USP28-203ENST00000537490 GPD2P43304 727 aa8.79□□□□□ -1
USP28-203ENST00000537490 SLC11A2P49281 568 aa8.79□□□□□ -1
USP28-203ENST00000537490 CSNK1EP49674 416 aaKnown RBP8.79□□□□□ -1
USP28-203ENST00000537490 STX17P56962 302 aa8.79□□□□□ -1
USP28-203ENST00000537490 RPS24P62847 133 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms