RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 PPP2R5CQ13362 524 aa12.39□□□□□ -0.43
LINC01089-204ENST00000535643 BLMHQ13867 455 aa12.39□□□□□ -0.43
LINC01089-204ENST00000535643 SIX1Q15475 284 aaPredicted RBP12.39□□□□□ -0.43
LINC01089-204ENST00000535643 USH1GQ495M9 461 aa12.39□□□□□ -0.43
LINC01089-204ENST00000535643 ODR4Q5SWX8 454 aa12.39□□□□□ -0.43
LINC01089-204ENST00000535643 LILRA6Q6PI73 481 aa12.39□□□□□ -0.43
LINC01089-204ENST00000535643 VSTM1Q6UX27 236 aa12.39□□□□□ -0.43
LINC01089-204ENST00000535643 METTL7BQ6UX53 244 aa12.39□□□□□ -0.43
LINC01089-204ENST00000535643 BZW1Q7L1Q6 419 aaKnown RBP12.39□□□□□ -0.43
LINC01089-204ENST00000535643 ARMC2Q8NEN0 867 aa12.39□□□□□ -0.43
LINC01089-204ENST00000535643 LMO3Q8TAP4 145 aa12.39□□□□□ -0.43
LINC01089-204ENST00000535643 ZNF398Q8TD17 642 aa12.39□□□□□ -0.43
LINC01089-204ENST00000535643 EPS8L3Q8TE67 593 aaKnown RBP12.39□□□□□ -0.43
LINC01089-204ENST00000535643 C18orf8Q96DM3 657 aa12.39□□□□□ -0.43
LINC01089-204ENST00000535643 TRIM11Q96F44 468 aa12.39□□□□□ -0.43
LINC01089-204ENST00000535643 MSANTD3Q96H12 275 aa12.39□□□□□ -0.43
LINC01089-204ENST00000535643 EIF2AK1Q9BQI3 630 aaKnown RBP12.39□□□□□ -0.43
LINC01089-204ENST00000535643 RUSC1Q9BVN2 902 aa12.39□□□□□ -0.43
LINC01089-204ENST00000535643 STRA6Q9BX79 667 aa12.39□□□□□ -0.43
LINC01089-204ENST00000535643 LRMDAQ9H2I8 198 aa12.39□□□□□ -0.43
LINC01089-204ENST00000535643 CDC42EP4Q9H3Q1 356 aaKnown RBP12.39□□□□□ -0.43
LINC01089-204ENST00000535643 AGPAT3Q9NRZ7 376 aa12.39□□□□□ -0.43
LINC01089-204ENST00000535643 POLIQ9UNA4 740 aa12.39□□□□□ -0.43
LINC01089-204ENST00000535643 AGAP1Q9UPQ3 857 aa12.39□□□□□ -0.43
LINC01089-204ENST00000535643 STARD13Q9Y3M8 1113 aa12.39□□□□□ -0.43
LINC01089-204ENST00000535643 CRYBG3Q68DQ2 2970 aa12.39□□□□□ -0.43
LINC01089-204ENST00000535643 MTCL1Q9Y4B5 1905 aaKnown RBP12.39□□□□□ -0.43
LINC01089-204ENST00000535643 NOTCH4Q99466 2003 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 SLC38A8A6NNN8 435 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 ARNTLO00327 626 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 BACH1O14867 736 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 DCTN3O75935 186 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 SMNDC1O75940 238 aaKnown RBP eCLIP12.38□□□□□ -0.432e-6■■■□□ 17.7
LINC01089-204ENST00000535643 UNC5CO95185 931 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 SOD2P04179 222 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 CFIP05156 583 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 ABCB4P21439 1286 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 SLC1A1P43005 524 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 IL9RQ01113 521 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 SETDB1Q15047 1291 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 C11orf91Q3C1V1 193 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 PRR16Q569H4 304 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 C2orf27AQ580R0 203 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 FAM133BQ5BKY9 247 aaKnown RBP12.38□□□□□ -0.43
LINC01089-204ENST00000535643 WASHC2DQ5SRD0 308 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 LRCH2Q5VUJ6 765 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 CDCA2Q69YH5 1023 aaPredicted RBP12.38□□□□□ -0.43
LINC01089-204ENST00000535643 PPP1R2P3Q6NXS1 205 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 TTC27Q6P3X3 843 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 GJB7Q6PEY0 223 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 TAS1R1Q7RTX1 841 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 ZNF720Q7Z2F6 126 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 C11orf74Q86VG3 221 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 ZC3H18Q86VM9 953 aaKnown RBP12.38□□□□□ -0.43
LINC01089-204ENST00000535643 TDRPQ86YL5 185 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 SYT12Q8IV01 421 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 NACC1Q96RE7 527 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 HSD17B14Q9BPX1 270 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 TIPINQ9BVW5 301 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 TRAIPQ9BWF2 469 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 BHMT2Q9H2M3 363 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 TMEM206Q9H813 350 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 AVENQ9NQS1 362 aaPredicted RBP12.38□□□□□ -0.43
LINC01089-204ENST00000535643 DNAAF2Q9NVR5 837 aaKnown RBP12.38□□□□□ -0.43
LINC01089-204ENST00000535643 GDE1Q9NZC3 331 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 SSX2IPQ9Y2D8 614 aa12.38□□□□□ -0.43
LINC01089-204ENST00000535643 ADAMTS9Q9P2N4 1935 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 TCP11X1B4DZS4 312 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 TRAFD1O14545 582 aaPredicted RBP12.37□□□□□ -0.43
LINC01089-204ENST00000535643 CLIC2O15247 247 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 MSH4O15457 936 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 CCL16O15467 120 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 HIP1RO75146 1068 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 C1RP00736 705 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 FTLP02792 175 aaPredicted RBP12.37□□□□□ -0.43
LINC01089-204ENST00000535643 PSMC3P17980 439 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 COMTP21964 271 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 FGFR4P22455 802 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 ALDH3A1P30838 453 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 YARSP54577 528 aaKnown RBP12.37□□□□□ -0.43
LINC01089-204ENST00000535643 TMPRSS3P57727 454 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 SP4Q02446 784 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 TLE1Q04724 770 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 SLC14A1Q13336 389 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 ZNF211Q13398 564 aaPredicted RBP12.37□□□□□ -0.43
LINC01089-204ENST00000535643 PON2Q15165 354 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 ACCSLQ4AC99 568 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 ZNF598Q86UK7 904 aaKnown RBP12.37□□□□□ -0.43
LINC01089-204ENST00000535643 SRRM1Q8IYB3 904 aaKnown RBP12.37□□□□□ -0.43
LINC01089-204ENST00000535643 FAM71AQ8IYT1 594 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 MYCT1Q8N699 235 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 GJA10Q969M2 543 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 TBC1D31Q96DN5 1066 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 TTC25Q96NG3 672 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 FIZ1Q96SL8 496 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 PHACTR1Q9C0D0 580 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 ST6GALNAC4Q9H4F1 302 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 PLSCR2Q9NRY7 297 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 FGFR1OP2Q9NVK5 253 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 HCFC1R1Q9NWW0 138 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms