RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 BHMTQ93088 406 aa13.61□□□□□ -0.23
TMEM258-202ENST00000535042 PRICKLE1Q96MT3 831 aaPredicted RBP13.61□□□□□ -0.23
TMEM258-202ENST00000535042 BBS2Q9BXC9 721 aa13.61□□□□□ -0.23
TMEM258-202ENST00000535042 OSGEPQ9NPF4 335 aa13.61□□□□□ -0.23
TMEM258-202ENST00000535042 C11orf16Q9NQ32 467 aa13.61□□□□□ -0.23
TMEM258-202ENST00000535042 PLK2Q9NYY3 685 aa13.61□□□□□ -0.23
TMEM258-202ENST00000535042 MTF2Q9Y483 593 aaPredicted RBP13.61□□□□□ -0.23
TMEM258-202ENST00000535042 PCDHA13Q9Y5I0 950 aa13.61□□□□□ -0.23
TMEM258-202ENST00000535042 HS3ST4Q9Y661 456 aa13.61□□□□□ -0.23
TMEM258-202ENST00000535042 TICRRQ7Z2Z1 1910 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 VCANP13611 3396 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 NCOR1O75376 2440 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 RCCD1A6NED2 376 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 FAM86C2PA6NEL3 165 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 NEDD8-MDP1E9PL57 170 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 DLL1O00548 723 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 TRIM24O15164 1050 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 PENKP01210 267 aaPredicted RBP13.6□□□□□ -0.23
TMEM258-202ENST00000535042 TYRP14679 529 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 TACR2P21452 398 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 ADRA1BP35368 520 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 GALK1P51570 392 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 C10orf76Q5T2E6 689 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 DAB2IPQ5VWQ8 1189 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 CHSY1Q86X52 802 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 CPNE8Q86YQ8 564 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 ETFBKMTQ8IXQ9 262 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 ZNF687Q8N1G0 1237 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 CCDC185Q8N715 623 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 ACRBPQ8NEB7 543 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 ZNF564Q8TBZ8 553 aaPredicted RBP13.6□□□□□ -0.23
TMEM258-202ENST00000535042 FAM3CQ92520 227 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 FOXQ1Q9C009 403 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 TBC1D17Q9HA65 648 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 CTTNBP2NLQ9P2B4 639 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 SLC12A6Q9UHW9 1150 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 ANAPC7Q9UJX3 599 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 INTUQ9ULD6 942 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 CLEC4EQ9ULY5 219 aa13.6□□□□□ -0.23
TMEM258-202ENST00000535042 TECTAO75443 2155 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 KANSL1LA0AUZ9 987 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 ANTXRLA6NF34 631 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 TARSP26639 723 aaKnown RBP13.59□□□□□ -0.23
TMEM258-202ENST00000535042 IRAK1P51617 712 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 RPS24P62847 133 aaKnown RBP13.59□□□□□ -0.23
TMEM258-202ENST00000535042 FZD5Q13467 585 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 AUHQ13825 339 aaKnown RBP13.59□□□□□ -0.23
TMEM258-202ENST00000535042 PON2Q15165 354 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 SPA17Q15506 151 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 MPPE1Q53F39 396 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 CWF19L1Q69YN2 538 aaKnown RBP13.59□□□□□ -0.23
TMEM258-202ENST00000535042 FBXL22Q6P050 247 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 SCYL2Q6P3W7 929 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 ZNF852Q6ZMS4 543 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 SFTPA1Q8IWL2 248 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 LRRC8AQ8IWT6 810 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 ZNF683Q8IZ20 524 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 LGI2Q8N0V4 545 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 CFAP52Q8N1V2 620 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 PHTF2Q8N3S3 785 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 SLC35G2Q8TBE7 412 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 DDI1Q8WTU0 396 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 EZH1Q92800 747 aaPredicted RBP13.59□□□□□ -0.23
TMEM258-202ENST00000535042 IGSF8Q969P0 613 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 TMA16Q96EY4 203 aaKnown RBP13.59□□□□□ -0.23
TMEM258-202ENST00000535042 MSANTD3Q96H12 275 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 SHDQ96IW2 340 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 PDLIM2Q96JY6 352 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 PEBP4Q96S96 227 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 DESI2Q9BSY9 194 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 SIK2Q9H0K1 926 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 LTB4R2Q9NPC1 389 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 TMEM51Q9NW97 253 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 UVRAGQ9P2Y5 699 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 NDRG2Q9UN36 371 aaKnown RBP13.59□□□□□ -0.23
TMEM258-202ENST00000535042 BDP1A6H8Y1 2624 aa13.59□□□□□ -0.23
TMEM258-202ENST00000535042 A0A0U1RQJ8 604 aa13.58□□□□□ -0.24
TMEM258-202ENST00000535042 MAN2B1O00754 1011 aa13.58□□□□□ -0.24
TMEM258-202ENST00000535042 CACNG3O60359 315 aa13.58□□□□□ -0.24
TMEM258-202ENST00000535042 TBL1XO60907 577 aa13.58□□□□□ -0.24
TMEM258-202ENST00000535042 TULP3O75386 442 aa13.58□□□□□ -0.24
TMEM258-202ENST00000535042 LRCH4O75427 683 aa13.58□□□□□ -0.24
TMEM258-202ENST00000535042 MTA2O94776 668 aa13.58□□□□□ -0.24
TMEM258-202ENST00000535042 CISD3P0C7P0 127 aa13.58□□□□□ -0.24
TMEM258-202ENST00000535042 TCF4P15884 667 aa13.58□□□□□ -0.24
TMEM258-202ENST00000535042 HOXD9P28356 352 aaPredicted RBP13.58□□□□□ -0.24
TMEM258-202ENST00000535042 MIPP30301 263 aa13.58□□□□□ -0.24
TMEM258-202ENST00000535042 CCZ1BP86790 482 aa13.58□□□□□ -0.24
TMEM258-202ENST00000535042 CCZ1P86791 482 aaPredicted RBP13.58□□□□□ -0.24
TMEM258-202ENST00000535042 TCEAL1Q15170 157 aa13.58□□□□□ -0.24
TMEM258-202ENST00000535042 TMEM196Q5HYL7 178 aa13.58□□□□□ -0.24
TMEM258-202ENST00000535042 RNF43Q68DV7 783 aa13.58□□□□□ -0.24
TMEM258-202ENST00000535042 ASTLQ6HA08 431 aaPredicted RBP13.58□□□□□ -0.24
TMEM258-202ENST00000535042 FSTL4Q6MZW2 842 aa13.58□□□□□ -0.24
TMEM258-202ENST00000535042 CYP4V2Q6ZWL3 525 aaPredicted RBP13.58□□□□□ -0.24
TMEM258-202ENST00000535042 FLCNQ8NFG4 579 aa13.58□□□□□ -0.24
TMEM258-202ENST00000535042 ATRIPQ8WXE1 791 aa13.58□□□□□ -0.24
TMEM258-202ENST00000535042 RFFLQ8WZ73 363 aa13.58□□□□□ -0.24
TMEM258-202ENST00000535042 CD101Q93033 1021 aa13.58□□□□□ -0.24
TMEM258-202ENST00000535042 NTAN1Q96AB6 310 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms