RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 YWHAHQ04917 246 aaPredicted RBP29.36■■■□□ 2.29
SAMD1-202ENST00000533683 ARL13BQ3SXY8 428 aa29.36■■■□□ 2.29
SAMD1-202ENST00000533683 CCNYQ8ND76 341 aa29.36■■■□□ 2.29
SAMD1-202ENST00000533683 ELAC2Q9BQ52 826 aaKnown RBP29.36■■■□□ 2.29
SAMD1-202ENST00000533683 WDCPQ9H6R7 721 aa29.36■■■□□ 2.29
SAMD1-202ENST00000533683 PLAC1Q9HBJ0 212 aa29.36■■■□□ 2.29
SAMD1-202ENST00000533683 COL4A4P53420 1690 aaPredicted RBP29.35■■■□□ 2.29
SAMD1-202ENST00000533683 RNF103O00237 685 aa29.35■■■□□ 2.29
SAMD1-202ENST00000533683 TPI1P60174 286 aa29.35■■■□□ 2.29
SAMD1-202ENST00000533683 NOMO2Q5JPE7 1267 aa29.35■■■□□ 2.29
SAMD1-202ENST00000533683 LRRC39Q96DD0 335 aa29.35■■■□□ 2.29
SAMD1-202ENST00000533683 MAGEB18Q96M61 343 aa29.35■■■□□ 2.29
SAMD1-202ENST00000533683 NSRP1Q9H0G5 558 aaKnown RBP29.35■■■□□ 2.29
SAMD1-202ENST00000533683 TYROBPO43914 113 aa29.35■■■□□ 2.29
SAMD1-202ENST00000533683 ASMTLO95671 621 aa29.35■■■□□ 2.29
SAMD1-202ENST00000533683 KRT4P19013 534 aa29.35■■■□□ 2.29
SAMD1-202ENST00000533683 GRIA1P42261 906 aa29.35■■■□□ 2.29
SAMD1-202ENST00000533683 HCAR3P49019 387 aa29.35■■■□□ 2.29
SAMD1-202ENST00000533683 PRPF39Q86UA1 669 aaKnown RBP29.35■■■□□ 2.29
SAMD1-202ENST00000533683 TAC4Q86UU9 113 aa29.35■■■□□ 2.29
SAMD1-202ENST00000533683 OTUD6BQ8N6M0 293 aa29.35■■■□□ 2.29
SAMD1-202ENST00000533683 CCDC197Q8NCU1 140 aa29.35■■■□□ 2.29
SAMD1-202ENST00000533683 SIGLEC10Q96LC7 697 aa29.35■■■□□ 2.29
SAMD1-202ENST00000533683 FGFR1OP2Q9NVK5 253 aa29.35■■■□□ 2.29
SAMD1-202ENST00000533683 SAMD15Q9P1V8 674 aa29.35■■■□□ 2.29
SAMD1-202ENST00000533683 TTLL3Q9Y4R7 772 aa29.35■■■□□ 2.29
SAMD1-202ENST00000533683 PPP1R12AO14974 1030 aaPredicted RBP29.34■■■□□ 2.29
SAMD1-202ENST00000533683 C1QAP02745 245 aa29.34■■■□□ 2.29
SAMD1-202ENST00000533683 RPA3P35244 121 aaPredicted RBP29.34■■■□□ 2.29
SAMD1-202ENST00000533683 SF3A3Q12874 501 aaKnown RBP eCLIP29.34■■■□□ 2.29
SAMD1-202ENST00000533683 COLGALT1Q8NBJ5 622 aa29.34■■■□□ 2.29
SAMD1-202ENST00000533683 SLC44A1Q8WWI5 657 aa29.34■■■□□ 2.29
SAMD1-202ENST00000533683 TGS1Q96RS0 853 aaKnown RBP29.34■■■□□ 2.29
SAMD1-202ENST00000533683 TKTL2Q9H0I9 626 aa29.34■■■□□ 2.29
SAMD1-202ENST00000533683 F5H423 210 aaPredicted RBP29.33■■■□□ 2.29
SAMD1-202ENST00000533683 FDFT1P37268 417 aa29.33■■■□□ 2.29
SAMD1-202ENST00000533683 NUGGCQ68CJ6 796 aa29.33■■■□□ 2.29
SAMD1-202ENST00000533683 SPATA2LQ8IUW3 424 aaPredicted RBP29.33■■■□□ 2.29
SAMD1-202ENST00000533683 COLGALT2Q8IYK4 626 aa29.33■■■□□ 2.29
SAMD1-202ENST00000533683 CEP41Q9BYV8 373 aa29.33■■■□□ 2.29
SAMD1-202ENST00000533683 HMX1Q9NP08 348 aaPredicted RBP29.33■■■□□ 2.29
SAMD1-202ENST00000533683 OPHN1O60890 802 aa29.33■■■□□ 2.29
SAMD1-202ENST00000533683 STK10O94804 968 aaKnown RBP29.33■■■□□ 2.29
SAMD1-202ENST00000533683 CA4P22748 312 aa29.33■■■□□ 2.29
SAMD1-202ENST00000533683 IL9RQ01113 521 aa29.33■■■□□ 2.29
SAMD1-202ENST00000533683 WASHC5Q12768 1159 aa29.33■■■□□ 2.29
SAMD1-202ENST00000533683 RNF187Q5TA31 235 aaPredicted RBP29.33■■■□□ 2.29
SAMD1-202ENST00000533683 DQX1Q8TE96 717 aaKnown RBP29.33■■■□□ 2.29
SAMD1-202ENST00000533683 PAIP2Q9BPZ3 127 aaKnown RBP29.33■■■□□ 2.29
SAMD1-202ENST00000533683 XAB2Q9HCS7 855 aaKnown RBP29.33■■■□□ 2.29
SAMD1-202ENST00000533683 TBC1D13Q9NVG8 400 aa29.33■■■□□ 2.29
SAMD1-202ENST00000533683 SEPT10Q9P0V9 454 aa29.33■■■□□ 2.29
SAMD1-202ENST00000533683 SNX10Q9Y5X0 201 aa29.33■■■□□ 2.29
SAMD1-202ENST00000533683 OR4Q2P0C623 313 aa29.32■■■□□ 2.28
SAMD1-202ENST00000533683 FOXN2P32314 431 aa29.32■■■□□ 2.28
SAMD1-202ENST00000533683 C4orf50Q6ZRC1 276 aa29.32■■■□□ 2.28
SAMD1-202ENST00000533683 C10orf67Q8IYJ2 551 aa29.32■■■□□ 2.28
SAMD1-202ENST00000533683 MPP5Q8N3R9 675 aa29.32■■■□□ 2.28
SAMD1-202ENST00000533683 URGCPQ8TCY9 931 aa29.32■■■□□ 2.28
SAMD1-202ENST00000533683 FERMT1Q9BQL6 677 aa29.32■■■□□ 2.28
SAMD1-202ENST00000533683 SSU72Q9NP77 194 aaKnown RBP29.32■■■□□ 2.28
SAMD1-202ENST00000533683 OR12D3Q9UGF7 316 aa29.32■■■□□ 2.28
SAMD1-202ENST00000533683 PATJQ8NI35 1801 aa29.32■■■□□ 2.28
SAMD1-202ENST00000533683 CPP00450 1065 aa29.32■■■□□ 2.28
SAMD1-202ENST00000533683 IKBKGQ9Y6K9 419 aa29.32■■■□□ 2.28
SAMD1-202ENST00000533683 GRIK1P39086 918 aa29.31■■■□□ 2.28
SAMD1-202ENST00000533683 OR1G1P47890 313 aa29.31■■■□□ 2.28
SAMD1-202ENST00000533683 PDZD4Q76G19 769 aaPredicted RBP29.31■■■□□ 2.28
SAMD1-202ENST00000533683 ZNF567Q8N184 647 aa29.31■■■□□ 2.28
SAMD1-202ENST00000533683 EBNA1BP2Q99848 306 aaKnown RBP29.31■■■□□ 2.28
SAMD1-202ENST00000533683 DNAJB4Q9UDY4 337 aa29.31■■■□□ 2.28
SAMD1-202ENST00000533683 ARVCFO00192 962 aa29.3■■■□□ 2.28
SAMD1-202ENST00000533683 TNFRSF10BO14763 440 aa29.3■■■□□ 2.28
SAMD1-202ENST00000533683 SNX3O60493 162 aa29.3■■■□□ 2.28
SAMD1-202ENST00000533683 INHBAP08476 426 aa29.3■■■□□ 2.28
SAMD1-202ENST00000533683 TAC1P20366 129 aa29.3■■■□□ 2.28
SAMD1-202ENST00000533683 SLC5A3P53794 718 aa29.3■■■□□ 2.28
SAMD1-202ENST00000533683 IFRD2Q12894 506 aaPredicted RBP29.3■■■□□ 2.28
SAMD1-202ENST00000533683 UNC5AQ6ZN44 842 aa29.3■■■□□ 2.28
SAMD1-202ENST00000533683 NPWQ8N729 165 aa29.3■■■□□ 2.28
SAMD1-202ENST00000533683 ANKS4BQ8N8V4 417 aa29.3■■■□□ 2.28
SAMD1-202ENST00000533683 TRIM56Q9BRZ2 755 aaKnown RBP29.3■■■□□ 2.28
SAMD1-202ENST00000533683 MAD1L1Q9Y6D9 718 aa29.3■■■□□ 2.28
SAMD1-202ENST00000533683 GOLGA6L7A0A1B0GV03 622 aa29.3■■■□□ 2.28
SAMD1-202ENST00000533683 TMEM189-UBE2V1I3L0A0 370 aa29.3■■■□□ 2.28
SAMD1-202ENST00000533683 TRDMT1O14717 391 aaKnown RBP29.3■■■□□ 2.28
SAMD1-202ENST00000533683 GNRH1P01148 92 aa29.3■■■□□ 2.28
SAMD1-202ENST00000533683 CDK16Q00536 496 aa29.3■■■□□ 2.28
SAMD1-202ENST00000533683 SPARCL1Q14515 664 aa29.3■■■□□ 2.28
SAMD1-202ENST00000533683 SLC1A5Q15758 541 aa29.3■■■□□ 2.28
SAMD1-202ENST00000533683 SLC39A12Q504Y0 691 aa29.3■■■□□ 2.28
SAMD1-202ENST00000533683 BEND5Q7L4P6 421 aa29.3■■■□□ 2.28
SAMD1-202ENST00000533683 PDCD7Q8N8D1 485 aaKnown RBP29.3■■■□□ 2.28
SAMD1-202ENST00000533683 PRG3Q9Y2Y8 225 aaPredicted RBP29.3■■■□□ 2.28
SAMD1-202ENST00000533683 RAD54BQ9Y620 910 aa29.3■■■□□ 2.28
SAMD1-202ENST00000533683 IGLV3-25P01717 112 aa29.29■■■□□ 2.28
SAMD1-202ENST00000533683 PRKCHP24723 683 aa29.29■■■□□ 2.28
SAMD1-202ENST00000533683 SARNPP82979 210 aaKnown RBP29.29■■■□□ 2.28
SAMD1-202ENST00000533683 ITIH4Q14624 930 aa29.29■■■□□ 2.28
SAMD1-202ENST00000533683 EPAS1Q99814 870 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms