RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 ZMIZ2Q8NF64 920 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 UBA3Q8TBC4 463 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 ERLEC1Q96DZ1 483 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 ZNF419Q96HQ0 510 aaPredicted RBP9.12□□□□□ -0.95
COPB1-210ENST00000533533 FAM81BQ96LP2 452 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 HSPA12BQ96MM6 686 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 KREMEN1Q96MU8 473 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 XPO6Q96QU8 1125 aaKnown RBP9.12□□□□□ -0.95
COPB1-210ENST00000533533 GABRG3Q99928 467 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 BBS2Q9BXC9 721 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 KLF16Q9BXK1 252 aaPredicted RBP9.12□□□□□ -0.95
COPB1-210ENST00000533533 DUSP16Q9BY84 665 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 FBXO44Q9H4M3 255 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 FAM124BQ9H5Z6 455 aaPredicted RBP9.12□□□□□ -0.95
COPB1-210ENST00000533533 CSNK1G1Q9HCP0 422 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 TLR8Q9NR97 1041 aaKnown RBP9.12□□□□□ -0.95
COPB1-210ENST00000533533 MARK1Q9P0L2 795 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 WDR35Q9P2L0 1181 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 DNAJC12Q9UKB3 198 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 TSPAN16Q9UKR8 245 aa9.12□□□□□ -0.95
COPB1-210ENST00000533533 GOLGA6L19H0YKK7 550 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 M0QYV0 167 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 GFRA2O00451 464 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 THAP12O43422 761 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 SH3BP5O60239 455 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 NDUFS2O75306 463 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 CAPNS1P04632 268 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 PAEPP09466 180 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 CISD3P0C7P0 127 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 ATP1A3P13637 1013 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 GNSP15586 552 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 ATP5C1P36542 298 aaKnown RBP9.11□□□□□ -0.95
COPB1-210ENST00000533533 UBXN1Q04323 297 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 GOLGA8FQ08AF8 430 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 GOLGA8DPQ0D2H9 430 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 NCAPHQ15003 741 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 ACAP1Q15027 740 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 PLEKHG6Q3KR16 790 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 SYCP2LQ5T4T6 812 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 ARHGAP17Q68EM7 881 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 TOGARAM2Q6ZUX3 1019 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 ENOSF1Q7L5Y1 443 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 PROSER1Q86XN7 944 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 DHX40Q8IX18 779 aaKnown RBP9.11□□□□□ -0.95
COPB1-210ENST00000533533 RGL4Q8IZJ4 473 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 UBR7Q8N806 425 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 SPOCK2Q92563 424 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 FOXJ1Q92949 421 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 MRGPRX1Q96LB2 322 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 CAMK1GQ96NX5 476 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 BPIFA3Q9BQP9 254 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 CD93Q9NPY3 652 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 CYLDQ9NQC7 956 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 CACNA2D2Q9NY47 1150 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 SUSD2Q9UGT4 822 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 LIMA1Q9UHB6 759 aaKnown RBP9.11□□□□□ -0.95
COPB1-210ENST00000533533 LSM7Q9UK45 103 aaKnown RBP9.11□□□□□ -0.95
COPB1-210ENST00000533533 KIAA1257Q9ULG3 409 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 PTPRQQ9UMZ3 2332 aa9.11□□□□□ -0.95
COPB1-210ENST00000533533 WASH3PC4AMC7 463 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 PIK3R2O00459 728 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 MED7O43513 233 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 SERPINC1P01008 464 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 FTH1P19P0C7X4 201 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 PNMA6AP0CW24 399 aaPredicted RBP9.1□□□□□ -0.95
COPB1-210ENST00000533533 MAOBP27338 520 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 CD6P30203 668 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 GNA15P30679 374 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 DGKGP49619 791 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 RGS7P49802 495 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 KLK7P49862 253 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 BCAT1P54687 386 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 PDE4CQ08493 712 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 BST2Q10589 180 aaKnown RBP9.1□□□□□ -0.95
COPB1-210ENST00000533533 KCNMA1Q12791 1236 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 SYCP1Q15431 976 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 FILIP1LQ4L180 1135 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 WDR45BQ5MNZ6 344 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 KLHDC10Q6PID8 442 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 KIAA1324Q6UXG2 1013 aaKnown RBP9.1□□□□□ -0.95
COPB1-210ENST00000533533 GPRIN1Q7Z2K8 1008 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 METTL3Q86U44 580 aaKnown RBP9.1□□□□□ -0.95
COPB1-210ENST00000533533 LUZP1Q86V48 1076 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 PIGZQ86VD9 579 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 ANKRD52Q8NB46 1076 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 NEK11Q8NG66 645 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 ADAMTS14Q8WXS8 1223 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 TFAP2BQ92481 460 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 FUCA2Q9BTY2 467 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 ZDHHC5Q9C0B5 715 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 SLC6A17Q9H1V8 727 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 PDCL3Q9H2J4 239 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 LRRC4Q9HBW1 653 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 CBX8Q9HC52 389 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 SIX2Q9NPC8 291 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 ST7Q9NRC1 585 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 FAM207AQ9NSI2 230 aaPredicted RBP9.1□□□□□ -0.95
COPB1-210ENST00000533533 OSER1Q9NX31 292 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 FBXO10Q9UK96 956 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 AJAP1Q9UKB5 411 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms