RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 MSLNQ13421 630 aaPredicted RBP17.11■□□□□ 0.33
CTSB-228ENST00000533455 LY6KQ17RY6 165 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 SFT2D3Q587I9 215 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 PPP6R3Q5H9R7 873 aaPredicted RBP17.11■□□□□ 0.33
CTSB-228ENST00000533455 RALGPS1Q5JS13 557 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 KCNT2Q6UVM3 1135 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 TMEM110Q86TL2 294 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 POU5F2Q8N7G0 328 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 PPP4R1Q8TF05 950 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 PYDC1Q8WXC3 89 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 ZNF668Q96K58 619 aaPredicted RBP17.11■□□□□ 0.33
CTSB-228ENST00000533455 KLHL4Q9C0H6 718 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 HESX1Q9UBX0 185 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 CDH22Q9UJ99 828 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 PLXNA1Q9UIW2 1896 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 CASQ2O14958 399 aaPredicted RBP17.11■□□□□ 0.33
CTSB-228ENST00000533455 IQCF3P0C7M6 154 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 UQCRBP14927 111 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 KCNA4P22459 653 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 BIRC2Q13490 618 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 GRM2Q14416 872 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 PDPK2PQ6A1A2 396 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 HEATR6Q6AI08 1181 aaKnown RBP17.11■□□□□ 0.33
CTSB-228ENST00000533455 PMF1Q6P1K2 205 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 LRRC8BQ6P9F7 803 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 SAMD7Q7Z3H4 446 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 RIOX2Q8IUF8 465 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 CMTM5Q96DZ9 223 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 EIF2B3Q9NR50 452 aaKnown RBP17.11■□□□□ 0.33
CTSB-228ENST00000533455 ADAMTS6Q9UKP5 1117 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 SSX2IPQ9Y2D8 614 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 PTPRFP10586 1907 aa17.1■□□□□ 0.33
CTSB-228ENST00000533455 CITO14578 2027 aa17.1■□□□□ 0.33
CTSB-228ENST00000533455 ARIH2O95376 493 aa17.1■□□□□ 0.33
CTSB-228ENST00000533455 PGAM1P18669 254 aa17.1■□□□□ 0.33
CTSB-228ENST00000533455 ITGAXP20702 1163 aa17.1■□□□□ 0.33
CTSB-228ENST00000533455 PRKG1Q13976 671 aa17.1■□□□□ 0.33
CTSB-228ENST00000533455 TMEM132DQ14C87 1099 aa17.1■□□□□ 0.33
CTSB-228ENST00000533455 SH3D19Q5HYK7 790 aa17.1■□□□□ 0.33
CTSB-228ENST00000533455 LBX2Q6XYB7 198 aa17.1■□□□□ 0.33
CTSB-228ENST00000533455 ATG14Q6ZNE5 492 aa17.1■□□□□ 0.33
CTSB-228ENST00000533455 ZDHHC17Q8IUH5 632 aa17.1■□□□□ 0.33
CTSB-228ENST00000533455 C10orf107Q8IVU9 208 aa17.1■□□□□ 0.33
CTSB-228ENST00000533455 UNC5BQ8IZJ1 945 aa17.1■□□□□ 0.33
CTSB-228ENST00000533455 JDP2Q8WYK2 163 aa17.1■□□□□ 0.33
CTSB-228ENST00000533455 C11orf84Q9BUA3 381 aaPredicted RBP17.1■□□□□ 0.33
CTSB-228ENST00000533455 PNPOQ9NVS9 261 aa17.1■□□□□ 0.33
CTSB-228ENST00000533455 A0A0A0MRY4 1105 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 HACD1B0YJ81 288 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 PAPSS1O43252 624 aaPredicted RBP17.09■□□□□ 0.33
CTSB-228ENST00000533455 PEX1O43933 1283 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 DGKIO75912 1065 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 ITGA2BP08514 1039 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 EPHB1P54762 984 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 ABCE1P61221 599 aaKnown RBP17.09■□□□□ 0.33
CTSB-228ENST00000533455 RBP5P82980 135 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 MED21Q13503 144 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 AMHR2Q16671 573 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 KYAT1Q16773 422 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 SLC10A6Q3KNW5 377 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 HSDL1Q3SXM5 330 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 NOL9Q5SY16 702 aaKnown RBP17.09■□□□□ 0.33
CTSB-228ENST00000533455 TTC30AQ86WT1 665 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 MICALL2Q8IY33 904 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 HACE1Q8IYU2 909 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 SLC26A7Q8TE54 656 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 TRAPPC12Q8WVT3 735 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 CENPIQ92674 756 aaPredicted RBP17.09■□□□□ 0.33
CTSB-228ENST00000533455 SPATA13Q96N96 652 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 GORASP1Q9BQQ3 440 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 PDZD7Q9H5P4 517 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 MTMR10Q9NXD2 777 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 SLC17A6Q9P2U8 582 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 COPG2Q9UBF2 871 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 A6NJR5 290 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 VAV1P15498 845 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 ARRB2P32121 409 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 SLC26A2P50443 739 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 CLCN3P51790 818 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 POU5F1BQ06416 359 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 CUL3Q13618 768 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 CELF3Q5SZQ8 465 aaKnown RBP17.09■□□□□ 0.33
CTSB-228ENST00000533455 PPP1R26Q5T8A7 1209 aaPredicted RBP17.09■□□□□ 0.33
CTSB-228ENST00000533455 MAP3K21Q5TCX8 1036 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 RASIP1Q5U651 963 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 NCBP2-AS2Q69YL0 99 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 EFCAB12Q6NXP0 572 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 SDCCAG8Q86SQ7 713 aaPredicted RBP17.09■□□□□ 0.33
CTSB-228ENST00000533455 GDPD5Q8WTR4 605 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 HTR3CQ8WXA8 447 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 ARNTL2Q8WYA1 636 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 CSPG4P5Q96PW8 444 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 HAPLN3Q96S86 360 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 KCTD15Q96SI1 283 aaPredicted RBP17.09■□□□□ 0.33
CTSB-228ENST00000533455 NAT9Q9BTE0 207 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 DHX35Q9H5Z1 703 aaKnown RBP17.09■□□□□ 0.33
CTSB-228ENST00000533455 POMPQ9Y244 141 aa17.09■□□□□ 0.33
CTSB-228ENST00000533455 PDE5AO76074 875 aa17.08■□□□□ 0.33
CTSB-228ENST00000533455 PABPC4LP0CB38 370 aaKnown RBP17.08■□□□□ 0.33
CTSB-228ENST00000533455 CCDC130P13994 396 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms