RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 GOT1P17174 413 aa12.69□□□□□ -0.38
TGFBR3-211ENST00000533370 AMPD1P23109 780 aa12.69□□□□□ -0.38
TGFBR3-211ENST00000533370 HOXA9P31269 272 aa12.69□□□□□ -0.38
TGFBR3-211ENST00000533370 DYNLT1P63172 113 aa12.69□□□□□ -0.38
TGFBR3-211ENST00000533370 COG7P83436 770 aa12.69□□□□□ -0.38
TGFBR3-211ENST00000533370 SLC7A5Q01650 507 aa12.69□□□□□ -0.38
TGFBR3-211ENST00000533370 NRG1Q02297 640 aaPredicted RBP12.69□□□□□ -0.38
TGFBR3-211ENST00000533370 PPP2R2DQ66LE6 453 aa12.69□□□□□ -0.38
TGFBR3-211ENST00000533370 RFX8Q6ZV50 586 aa12.69□□□□□ -0.38
TGFBR3-211ENST00000533370 PDZD4Q76G19 769 aaPredicted RBP12.69□□□□□ -0.38
TGFBR3-211ENST00000533370 BZW1Q7L1Q6 419 aaKnown RBP12.69□□□□□ -0.38
TGFBR3-211ENST00000533370 MIB1Q86YT6 1006 aa12.69□□□□□ -0.38
TGFBR3-211ENST00000533370 SLC35B2Q8TB61 432 aa12.69□□□□□ -0.38
TGFBR3-211ENST00000533370 ATG4AQ8WYN0 398 aa12.69□□□□□ -0.38
TGFBR3-211ENST00000533370 BTN2A3PQ96KV6 586 aa12.69□□□□□ -0.38
TGFBR3-211ENST00000533370 NACA2Q9H009 215 aa12.69□□□□□ -0.38
TGFBR3-211ENST00000533370 IL21Q9HBE4 155 aa12.69□□□□□ -0.38
TGFBR3-211ENST00000533370 DMGDHQ9UI17 866 aaKnown RBP12.69□□□□□ -0.38
TGFBR3-211ENST00000533370 ZNF148Q9UQR1 794 aa12.69□□□□□ -0.38
TGFBR3-211ENST00000533370 UTP11Q9Y3A2 253 aaKnown RBP12.69□□□□□ -0.38
TGFBR3-211ENST00000533370 PCDHGA4Q9Y5G9 962 aa12.69□□□□□ -0.38
TGFBR3-211ENST00000533370 BHMG1C9JSJ3 638 aaPredicted RBP12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 FAM72CH0Y354 149 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 TTI1O43156 1089 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 COCHO43405 550 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 CREB3O43889 395 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 HEXIM1O94992 359 aaKnown RBP12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 GAS8O95995 478 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 PTPN2P17706 415 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 PFKLP17858 780 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 KCNJ1P48048 391 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 DRG2P55039 364 aaKnown RBP12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 VCPP55072 806 aaKnown RBP12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 TPI1P60174 286 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 MRPS25P82663 173 aaKnown RBP12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 OTUD4Q01804 1114 aaKnown RBP12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 GUCY2DQ02846 1103 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 XRCC4Q13426 336 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 DPYSQ14117 519 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 BRD3Q15059 726 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 FAM72AQ5TYM5 149 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 NUGGCQ68CJ6 796 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 FAM72DQ6L9T8 149 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 C1orf228Q6PIY5 440 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 CCNI2Q6ZMN8 369 aaPredicted RBP12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 TMEM150AQ86TG1 271 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 FAM72BQ86X60 149 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 TDHQ8IZJ6 230 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 EIF1ADQ8N9N8 165 aaKnown RBP12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 ACTL9Q8TC94 416 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 ARNTL2Q8WYA1 636 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 AZIN2Q96A70 460 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 PNKPQ96T60 521 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 ERP44Q9BS26 406 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 LRRC3Q9BY71 257 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 SIK2Q9H0K1 926 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 RAB17Q9H0T7 212 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 EPB41L5Q9HCM4 733 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 ZNF334Q9HCZ1 680 aaPredicted RBP12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 GDF3Q9NR23 364 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 ARHGEF4Q9NR80 690 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 SAE1Q9UBE0 346 aaPredicted RBP12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 DNPEPQ9ULA0 475 aa12.68□□□□□ -0.38
TGFBR3-211ENST00000533370 CHD9Q3L8U1 2897 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 SOBPA7XYQ1 873 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 XYLBO75191 536 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 OAS1P00973 400 aaKnown RBP12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 POU2F2P09086 479 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 TNFRSF8P28908 595 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 CDC25CP30307 473 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 STIP1P31948 543 aaKnown RBP12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 HARS2P49590 506 aaKnown RBP12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 EIF3EP60228 445 aaKnown RBP12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 SMAD3P84022 425 aaKnown RBP12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 PAFAH1B3Q15102 231 aaKnown RBP12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 NOMO1Q15155 1222 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 OASLQ15646 514 aaKnown RBP12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 DUPD1Q68J44 220 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 GSTA5Q7RTV2 222 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 JAMLQ86YT9 394 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 LEMD2Q8NC56 503 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.67□□□□□ -0.382e-6■■■■□ 25.3
TGFBR3-211ENST00000533370 SEC14L1Q92503 715 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 ANKRD7Q92527 254 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 MRPS31Q92665 395 aaKnown RBP12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 PLD4Q96BZ4 506 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 GCNAQ96QF7 691 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 KLF16Q9BXK1 252 aaPredicted RBP12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 RNF38Q9H0F5 515 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 TLE6Q9H808 572 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 CERS4Q9HA82 394 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 MAN1C1Q9NR34 630 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 ASAH2Q9NR71 780 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 ARGLU1Q9NWB6 273 aaPredicted RBP12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 ZDHHC7Q9NXF8 308 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 RAD54BQ9Y620 910 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 PLXNA3P51805 1871 aa12.67□□□□□ -0.38
TGFBR3-211ENST00000533370 PLXNA4Q9HCM2 1894 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 C2orf78A6NCI8 922 aa12.66□□□□□ -0.38
TGFBR3-211ENST00000533370 PER2O15055 1255 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms