RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TFE3P19532 575 aaPredicted RBP21.21■□□□□ 0.99
CCS-208ENST00000533244 CCR1P32246 355 aa21.21■□□□□ 0.99
CCS-208ENST00000533244 RNASE9P60153 205 aaKnown RBP21.21■□□□□ 0.99
CCS-208ENST00000533244 DMWDQ09019 674 aa21.21■□□□□ 0.99
CCS-208ENST00000533244 MS4A13Q5J8X5 152 aa21.21■□□□□ 0.99
CCS-208ENST00000533244 SFMBT2Q5VUG0 894 aa21.21■□□□□ 0.99
CCS-208ENST00000533244 IQCDQ96DY2 449 aa21.21■□□□□ 0.99
CCS-208ENST00000533244 MYEOVQ96EZ4 313 aa21.21■□□□□ 0.99
CCS-208ENST00000533244 XPO4Q9C0E2 1151 aaKnown RBP21.21■□□□□ 0.99
CCS-208ENST00000533244 SLC8A2Q9UPR5 921 aa21.21■□□□□ 0.99
CCS-208ENST00000533244 MYO18AQ92614 2054 aaKnown RBP21.21■□□□□ 0.99
CCS-208ENST00000533244 ITIH6Q6UXX5 1313 aa21.21■□□□□ 0.99
CCS-208ENST00000533244 CCDC163A0A0D9SF12 145 aa21.21■□□□□ 0.99
CCS-208ENST00000533244 M0QYT0 321 aa21.21■□□□□ 0.99
CCS-208ENST00000533244 TIE1P35590 1138 aa21.21■□□□□ 0.99
CCS-208ENST00000533244 C1QBPQ07021 282 aaKnown RBP21.21■□□□□ 0.99
CCS-208ENST00000533244 GEN1Q17RS7 908 aa21.21■□□□□ 0.99
CCS-208ENST00000533244 SLC25A52Q3SY17 297 aa21.21■□□□□ 0.99
CCS-208ENST00000533244 CAMKK1Q8N5S9 505 aa21.21■□□□□ 0.99
CCS-208ENST00000533244 ALLCQ8N6M5 410 aa21.21■□□□□ 0.99
CCS-208ENST00000533244 ATP6V0D2Q8N8Y2 350 aa21.21■□□□□ 0.99
CCS-208ENST00000533244 PRMT1Q99873 361 aaKnown RBP21.21■□□□□ 0.99
CCS-208ENST00000533244 SEMA4AQ9H3S1 761 aa21.21■□□□□ 0.99
CCS-208ENST00000533244 METTL5Q9NRN9 209 aaKnown RBP21.21■□□□□ 0.99
CCS-208ENST00000533244 PIGVQ9NUD9 493 aa21.21■□□□□ 0.99
CCS-208ENST00000533244 TMEM51Q9NW97 253 aa21.21■□□□□ 0.99
CCS-208ENST00000533244 ADAM22Q9P0K1 906 aa21.21■□□□□ 0.99
CCS-208ENST00000533244 SYNJ2BP-COX16A0A087WUM0 186 aa21.2■□□□□ 0.98
CCS-208ENST00000533244 TCRBV5S1A1TA0A578 114 aa21.2■□□□□ 0.98
CCS-208ENST00000533244 KLF8O95600 359 aaPredicted RBP21.2■□□□□ 0.98
CCS-208ENST00000533244 CALB1P05937 261 aa21.2■□□□□ 0.98
CCS-208ENST00000533244 CXCR3P49682 368 aa21.2■□□□□ 0.98
CCS-208ENST00000533244 SULT1E1P49888 294 aa21.2■□□□□ 0.98
CCS-208ENST00000533244 NME3Q13232 169 aa21.2■□□□□ 0.98
CCS-208ENST00000533244 MTA1Q13330 715 aa21.2■□□□□ 0.98
CCS-208ENST00000533244 ZNF571Q7Z3V5 609 aaPredicted RBP21.2■□□□□ 0.98
CCS-208ENST00000533244 KIAA0907Q7Z7F0 614 aaPredicted RBP21.2■□□□□ 0.98
CCS-208ENST00000533244 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.2■□□□□ 0.98
CCS-208ENST00000533244 ZNF513Q8N8E2 541 aaPredicted RBP21.2■□□□□ 0.98
CCS-208ENST00000533244 TXNDC5Q8NBS9 432 aaKnown RBP21.2■□□□□ 0.98
CCS-208ENST00000533244 HJURPQ8NCD3 748 aaPredicted RBP21.2■□□□□ 0.98
CCS-208ENST00000533244 TBCBQ99426 244 aa21.2■□□□□ 0.98
CCS-208ENST00000533244 HAUS4Q9H6D7 363 aa21.2■□□□□ 0.98
CCS-208ENST00000533244 SEPT11Q9NVA2 429 aaKnown RBP21.2■□□□□ 0.98
CCS-208ENST00000533244 COX16Q9P0S2 106 aa21.2■□□□□ 0.98
CCS-208ENST00000533244 CAPN11Q9UMQ6 739 aa21.2■□□□□ 0.98
CCS-208ENST00000533244 SGK1O00141 431 aa21.19■□□□□ 0.98
CCS-208ENST00000533244 ADAM23O75077 832 aa21.19■□□□□ 0.98
CCS-208ENST00000533244 F9P00740 461 aa21.19■□□□□ 0.98
CCS-208ENST00000533244 HNRNPLP14866 589 aaKnown RBP eCLIP21.19■□□□□ 0.98
CCS-208ENST00000533244 ABCB4P21439 1286 aa21.19■□□□□ 0.98
CCS-208ENST00000533244 TACR2P21452 398 aa21.19■□□□□ 0.98
CCS-208ENST00000533244 HLA-FP30511 346 aa21.19■□□□□ 0.98
CCS-208ENST00000533244 FNTBP49356 437 aa21.19■□□□□ 0.98
CCS-208ENST00000533244 CRY1Q16526 586 aa21.19■□□□□ 0.98
CCS-208ENST00000533244 EGFLAMQ63HQ2 1017 aa21.19■□□□□ 0.98
CCS-208ENST00000533244 ACAD10Q6JQN1 1059 aa21.19■□□□□ 0.98
CCS-208ENST00000533244 TRMT11Q7Z4G4 463 aaKnown RBP21.19■□□□□ 0.98
CCS-208ENST00000533244 ANKS1BQ7Z6G8 1248 aa21.19■□□□□ 0.98
CCS-208ENST00000533244 WDR5BQ86VZ2 330 aa21.19■□□□□ 0.98
CCS-208ENST00000533244 LONP2Q86WA8 852 aa21.19■□□□□ 0.98
CCS-208ENST00000533244 CCDC33Q8N5R6 958 aa21.19■□□□□ 0.98
CCS-208ENST00000533244 RNF214Q8ND24 703 aa21.19■□□□□ 0.98
CCS-208ENST00000533244 C3orf20Q8ND61 904 aa21.19■□□□□ 0.98
CCS-208ENST00000533244 ATRIPQ8WXE1 791 aa21.19■□□□□ 0.98
CCS-208ENST00000533244 SYN2Q92777 582 aaPredicted RBP21.19■□□□□ 0.98
CCS-208ENST00000533244 ZDHHC4Q9NPG8 344 aa21.19■□□□□ 0.98
CCS-208ENST00000533244 ARHGEF38Q9NXL2 777 aa21.19■□□□□ 0.98
CCS-208ENST00000533244 SLC12A6Q9UHW9 1150 aa21.19■□□□□ 0.98
CCS-208ENST00000533244 ZFHX2Q9C0A1 2572 aaPredicted RBP21.18■□□□□ 0.98
CCS-208ENST00000533244 TBL1XO60907 577 aa21.18■□□□□ 0.98
CCS-208ENST00000533244 ENDOD1O94919 500 aa21.18■□□□□ 0.98
CCS-208ENST00000533244 GYPCP04921 128 aa21.18■□□□□ 0.98
CCS-208ENST00000533244 TPM3P06753 285 aa21.18■□□□□ 0.98
CCS-208ENST00000533244 TNFAIP3P21580 790 aa21.18■□□□□ 0.98
CCS-208ENST00000533244 RPS24P62847 133 aaKnown RBP21.18■□□□□ 0.98
CCS-208ENST00000533244 ZBED6P86452 979 aa21.18■□□□□ 0.98
CCS-208ENST00000533244 EIF4HQ15056 248 aaKnown RBP21.18■□□□□ 0.98
CCS-208ENST00000533244 EOGTQ5NDL2 527 aa21.18■□□□□ 0.98
CCS-208ENST00000533244 BRMS1LQ5PSV4 323 aa21.18■□□□□ 0.98
CCS-208ENST00000533244 RAP1GAP2Q684P5 730 aa21.18■□□□□ 0.98
CCS-208ENST00000533244 HGSNATQ68CP4 663 aa21.18■□□□□ 0.98
CCS-208ENST00000533244 PPP1R2P3Q6NXS1 205 aa21.18■□□□□ 0.98
CCS-208ENST00000533244 TMEM92Q6UXU6 159 aa21.18■□□□□ 0.98
CCS-208ENST00000533244 CHSY1Q86X52 802 aa21.18■□□□□ 0.98
CCS-208ENST00000533244 EMC1Q8N766 993 aa21.18■□□□□ 0.98
CCS-208ENST00000533244 JOSD2Q8TAC2 188 aa21.18■□□□□ 0.98
CCS-208ENST00000533244 WFDC5Q8TCV5 224 aa21.18■□□□□ 0.98
CCS-208ENST00000533244 LMLNQ96KR4 655 aa21.18■□□□□ 0.98
CCS-208ENST00000533244 CFAP57Q96MR6 1250 aa21.18■□□□□ 0.98
CCS-208ENST00000533244 HHIPQ96QV1 700 aa21.18■□□□□ 0.98
CCS-208ENST00000533244 TAS2R14Q9NYV8 317 aa21.18■□□□□ 0.98
CCS-208ENST00000533244 EBF1Q9UH73 591 aa21.18■□□□□ 0.98
CCS-208ENST00000533244 USP34Q70CQ2 3546 aa21.18■□□□□ 0.98
CCS-208ENST00000533244 C2CD4BA6NLJ0 364 aa21.17■□□□□ 0.98
CCS-208ENST00000533244 I6L893 689 aaPredicted RBP21.17■□□□□ 0.98
CCS-208ENST00000533244 CBFA2T2O43439 604 aa21.17■□□□□ 0.98
CCS-208ENST00000533244 APBB3O95704 486 aa21.17■□□□□ 0.98
CCS-208ENST00000533244 DEUP1Q05D60 604 aa21.17■□□□□ 0.98
CCS-208ENST00000533244 KLHL30Q0D2K2 578 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms