RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 RNF43Q68DV7 783 aa31.45■■■□□ 2.63
SSSCA1-207ENST00000533115 OLFML1Q6UWY5 402 aa31.45■■■□□ 2.63
SSSCA1-207ENST00000533115 DEFB106AQ8N104 65 aa31.45■■■□□ 2.63
SSSCA1-207ENST00000533115 TMEM35BQ8NCS4 154 aa31.45■■■□□ 2.63
SSSCA1-207ENST00000533115 CIPCQ9C0C6 399 aa31.45■■■□□ 2.63
SSSCA1-207ENST00000533115 LIMA1Q9UHB6 759 aaKnown RBP31.45■■■□□ 2.63
SSSCA1-207ENST00000533115 ABCA7Q8IZY2 2146 aa31.45■■■□□ 2.62
SSSCA1-207ENST00000533115 MOCS2O96007 188 aaPredicted RBP31.44■■■□□ 2.62
SSSCA1-207ENST00000533115 APOEP02649 317 aa31.44■■■□□ 2.62
SSSCA1-207ENST00000533115 PITX1P78337 314 aaPredicted RBP31.44■■■□□ 2.62
SSSCA1-207ENST00000533115 TYRO3Q06418 890 aa31.44■■■□□ 2.62
SSSCA1-207ENST00000533115 ENPP2Q13822 863 aa31.44■■■□□ 2.62
SSSCA1-207ENST00000533115 CCDC6Q16204 474 aa31.44■■■□□ 2.62
SSSCA1-207ENST00000533115 ZC3H12AQ5D1E8 599 aaKnown RBP31.44■■■□□ 2.62
SSSCA1-207ENST00000533115 WFIKKN2Q8TEU8 576 aa31.44■■■□□ 2.62
SSSCA1-207ENST00000533115 ERLEC1Q96DZ1 483 aa31.44■■■□□ 2.62
SSSCA1-207ENST00000533115 ABCB8Q9NUT2 735 aa31.44■■■□□ 2.62
SSSCA1-207ENST00000533115 DLL3Q9NYJ7 618 aa31.44■■■□□ 2.62
SSSCA1-207ENST00000533115 GRAP2O75791 330 aa31.43■■■□□ 2.62
SSSCA1-207ENST00000533115 ZNF806P0C7X5 589 aa31.43■■■□□ 2.62
SSSCA1-207ENST00000533115 NDUFV2P19404 249 aa31.43■■■□□ 2.62
SSSCA1-207ENST00000533115 SDHBP21912 280 aa31.43■■■□□ 2.62
SSSCA1-207ENST00000533115 CDH5P33151 784 aaPredicted RBP31.43■■■□□ 2.62
SSSCA1-207ENST00000533115 MPLP40238 635 aa31.43■■■□□ 2.62
SSSCA1-207ENST00000533115 IL12RB1P42701 662 aa31.43■■■□□ 2.62
SSSCA1-207ENST00000533115 CDK17Q00537 523 aa31.43■■■□□ 2.62
SSSCA1-207ENST00000533115 SLC6A3Q01959 620 aa31.43■■■□□ 2.62
SSSCA1-207ENST00000533115 EIF4EBP2Q13542 120 aaPredicted RBP31.43■■■□□ 2.62
SSSCA1-207ENST00000533115 ZNF234Q14588 700 aa31.43■■■□□ 2.62
SSSCA1-207ENST00000533115 PUM1Q14671 1186 aaKnown RBP eCLIP31.43■■■□□ 2.62
SSSCA1-207ENST00000533115 PLA2G2CQ5R387 149 aa31.43■■■□□ 2.62
SSSCA1-207ENST00000533115 FRMD1Q8N878 549 aa31.43■■■□□ 2.62
SSSCA1-207ENST00000533115 DDX51Q8N8A6 666 aaKnown RBP eCLIP31.43■■■□□ 2.62
SSSCA1-207ENST00000533115 HJURPQ8NCD3 748 aaPredicted RBP31.43■■■□□ 2.62
SSSCA1-207ENST00000533115 DDX1Q92499 740 aaKnown RBP31.43■■■□□ 2.62
SSSCA1-207ENST00000533115 PRICKLE1Q96MT3 831 aaPredicted RBP31.43■■■□□ 2.62
SSSCA1-207ENST00000533115 NUCKS1Q9H1E3 243 aaKnown RBP31.43■■■□□ 2.62
SSSCA1-207ENST00000533115 FAM204AQ9H8W3 233 aa31.43■■■□□ 2.62
SSSCA1-207ENST00000533115 FAM207AQ9NSI2 230 aaPredicted RBP31.43■■■□□ 2.62
SSSCA1-207ENST00000533115 CALCOCO1Q9P1Z2 691 aa31.43■■■□□ 2.62
SSSCA1-207ENST00000533115 DNAH14Q0VDD8 3507 aa31.42■■■□□ 2.62
SSSCA1-207ENST00000533115 CREB5Q02930 508 aa31.42■■■□□ 2.62
SSSCA1-207ENST00000533115 STARD3Q14849 445 aa31.42■■■□□ 2.62
SSSCA1-207ENST00000533115 NCAPHQ15003 741 aa31.42■■■□□ 2.62
SSSCA1-207ENST00000533115 MS4A13Q5J8X5 152 aa31.42■■■□□ 2.62
SSSCA1-207ENST00000533115 TAF3Q5VWG9 929 aa31.42■■■□□ 2.62
SSSCA1-207ENST00000533115 KIAA0907Q7Z7F0 614 aaPredicted RBP31.42■■■□□ 2.62
SSSCA1-207ENST00000533115 NOP9Q86U38 636 aaKnown RBP31.42■■■□□ 2.62
SSSCA1-207ENST00000533115 ZDHHC17Q8IUH5 632 aa31.42■■■□□ 2.62
SSSCA1-207ENST00000533115 SORCS1Q8WY21 1168 aa31.42■■■□□ 2.62
SSSCA1-207ENST00000533115 SLTMQ9NWH9 1034 aaKnown RBP eCLIP31.42■■■□□ 2.62
SSSCA1-207ENST00000533115 STIM2Q9P246 746 aa31.42■■■□□ 2.62
SSSCA1-207ENST00000533115 XPO7Q9UIA9 1087 aaKnown RBP31.42■■■□□ 2.62
SSSCA1-207ENST00000533115 MBD1Q9UIS9 605 aaPredicted RBP31.42■■■□□ 2.62
SSSCA1-207ENST00000533115 GGA2Q9UJY4 613 aa31.42■■■□□ 2.62
SSSCA1-207ENST00000533115 SIK3Q9Y2K2 1263 aa31.42■■■□□ 2.62
SSSCA1-207ENST00000533115 THADAQ6YHU6 1953 aa31.41■■■□□ 2.62
SSSCA1-207ENST00000533115 TYW5A2RUC4 315 aaKnown RBP31.41■■■□□ 2.62
SSSCA1-207ENST00000533115 MAP3K13O43283 966 aa31.41■■■□□ 2.62
SSSCA1-207ENST00000533115 ZNF18P17022 549 aa31.41■■■□□ 2.62
SSSCA1-207ENST00000533115 CDK11BP21127 795 aaKnown RBP31.41■■■□□ 2.62
SSSCA1-207ENST00000533115 POLR2FP61218 127 aaKnown RBP31.41■■■□□ 2.62
SSSCA1-207ENST00000533115 ARID5AQ03989 594 aa31.41■■■□□ 2.62
SSSCA1-207ENST00000533115 CHST9Q7L1S5 443 aa31.41■■■□□ 2.62
SSSCA1-207ENST00000533115 SLC26A9Q7LBE3 791 aa31.41■■■□□ 2.62
SSSCA1-207ENST00000533115 AHI1Q8N157 1196 aa31.41■■■□□ 2.62
SSSCA1-207ENST00000533115 ZNF557Q8N988 423 aaPredicted RBP31.41■■■□□ 2.62
SSSCA1-207ENST00000533115 WFDC5Q8TCV5 224 aa31.41■■■□□ 2.62
SSSCA1-207ENST00000533115 MYEOVQ96EZ4 313 aa31.41■■■□□ 2.62
SSSCA1-207ENST00000533115 BTN2A3PQ96KV6 586 aa31.41■■■□□ 2.62
SSSCA1-207ENST00000533115 DAAM1Q9Y4D1 1078 aa31.41■■■□□ 2.62
SSSCA1-207ENST00000533115 PLXND1Q9Y4D7 1925 aa31.41■■■□□ 2.62
SSSCA1-207ENST00000533115 BCLAF3A2AJT9 711 aaKnown RBP31.4■■■□□ 2.62
SSSCA1-207ENST00000533115 LRRC10BA6NIK2 292 aa31.4■■■□□ 2.62
SSSCA1-207ENST00000533115 DAB1O75553 588 aa31.4■■■□□ 2.62
SSSCA1-207ENST00000533115 PABPC1P11940 636 aaKnown RBP31.4■■■□□ 2.62
SSSCA1-207ENST00000533115 SF3A2Q15428 464 aaKnown RBP31.4■■■□□ 2.62
SSSCA1-207ENST00000533115 LPCAT2Q7L5N7 544 aa31.4■■■□□ 2.62
SSSCA1-207ENST00000533115 ADIPOR2Q86V24 386 aa31.4■■■□□ 2.62
SSSCA1-207ENST00000533115 MFN1Q8IWA4 741 aa31.4■■■□□ 2.62
SSSCA1-207ENST00000533115 ATP6V0D2Q8N8Y2 350 aa31.4■■■□□ 2.62
SSSCA1-207ENST00000533115 ZNF397Q8NF99 534 aaPredicted RBP31.4■■■□□ 2.62
SSSCA1-207ENST00000533115 EPS8L1Q8TE68 723 aa31.4■■■□□ 2.62
SSSCA1-207ENST00000533115 MRGPRX1Q96LB2 322 aa31.4■■■□□ 2.62
SSSCA1-207ENST00000533115 HSD3B7Q9H2F3 369 aa31.4■■■□□ 2.62
SSSCA1-207ENST00000533115 VPS45Q9NRW7 570 aa31.4■■■□□ 2.62
SSSCA1-207ENST00000533115 DDIT4Q9NX09 232 aa31.4■■■□□ 2.62
SSSCA1-207ENST00000533115 SLC12A6Q9UHW9 1150 aa31.4■■■□□ 2.62
SSSCA1-207ENST00000533115 CDV3Q9UKY7 258 aaKnown RBP31.4■■■□□ 2.62
SSSCA1-207ENST00000533115 LGALS16A8MUM7 142 aa31.39■■■□□ 2.62
SSSCA1-207ENST00000533115 EPHB6O15197 1021 aa31.39■■■□□ 2.62
SSSCA1-207ENST00000533115 LSM8O95777 96 aaKnown RBP31.39■■■□□ 2.62
SSSCA1-207ENST00000533115 SLC2A3P11169 496 aa31.39■■■□□ 2.62
SSSCA1-207ENST00000533115 GABRB2P47870 512 aa31.39■■■□□ 2.62
SSSCA1-207ENST00000533115 RPS24P62847 133 aaKnown RBP31.39■■■□□ 2.62
SSSCA1-207ENST00000533115 SYCP1Q15431 976 aa31.39■■■□□ 2.62
SSSCA1-207ENST00000533115 FUT11Q495W5 492 aa31.39■■■□□ 2.62
SSSCA1-207ENST00000533115 AOPEPQ8N6M6 819 aa31.39■■■□□ 2.62
SSSCA1-207ENST00000533115 C12orf50Q8NA57 414 aaPredicted RBP31.39■■■□□ 2.62
SSSCA1-207ENST00000533115 FIBINQ8TAL6 211 aa31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms