RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 ATP1A3P13637 1013 aa17.29■□□□□ 0.36
PKP3-209ENST00000533069 GBP1P32455 592 aa17.29■□□□□ 0.36
PKP3-209ENST00000533069 CDH5P33151 784 aaPredicted RBP17.29■□□□□ 0.36
PKP3-209ENST00000533069 P2RY2P41231 377 aa17.29■□□□□ 0.36
PKP3-209ENST00000533069 WASP42768 502 aa17.29■□□□□ 0.36
PKP3-209ENST00000533069 CDK17Q00537 523 aa17.29■□□□□ 0.36
PKP3-209ENST00000533069 STARD3Q14849 445 aa17.29■□□□□ 0.36
PKP3-209ENST00000533069 FAM133BQ5BKY9 247 aaKnown RBP17.29■□□□□ 0.36
PKP3-209ENST00000533069 PIK3R6Q5UE93 754 aa17.29■□□□□ 0.36
PKP3-209ENST00000533069 OLFML1Q6UWY5 402 aa17.29■□□□□ 0.36
PKP3-209ENST00000533069 PGBD3Q8N328 593 aa17.29■□□□□ 0.36
PKP3-209ENST00000533069 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.29■□□□□ 0.36
PKP3-209ENST00000533069 HJURPQ8NCD3 748 aaPredicted RBP17.29■□□□□ 0.36
PKP3-209ENST00000533069 ADAM32Q8TC27 787 aa17.29■□□□□ 0.36
PKP3-209ENST00000533069 SLC2A13Q96QE2 648 aa17.29■□□□□ 0.36
PKP3-209ENST00000533069 ELOVL2Q9NXB9 296 aa17.29■□□□□ 0.36
PKP3-209ENST00000533069 CACNA2D2Q9NY47 1150 aa17.29■□□□□ 0.36
PKP3-209ENST00000533069 THAP10Q9P2Z0 257 aaPredicted RBP17.29■□□□□ 0.36
PKP3-209ENST00000533069 TJP2Q9UDY2 1190 aa17.29■□□□□ 0.36
PKP3-209ENST00000533069 CLEC4EQ9ULY5 219 aa17.29■□□□□ 0.36
PKP3-209ENST00000533069 A0A1B0GTH6 734 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 LGALS16A8MUM7 142 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 DCLK1O15075 740 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 ERBB2P04626 1255 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 SLC2A3P11169 496 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 GABRG2P18507 467 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 CDC25BP30305 580 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 SLC6A4P31645 630 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 COPB1P53618 953 aaKnown RBP17.28■□□□□ 0.36
PKP3-209ENST00000533069 ENPP2Q13822 863 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 PTPN20Q4JDL3 420 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 DCAF6Q58WW2 860 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 PMS2CLQ68D20 193 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 NADSYN1Q6IA69 706 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 OR6B2Q6IFH4 312 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 FAM183BPQ6ZVS7 135 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 SLC26A9Q7LBE3 791 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 ZNF677Q86XU0 584 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 AHI1Q8N157 1196 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 MSANTD4Q8NCY6 345 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 IQCDQ96DY2 449 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 BTN2A3PQ96KV6 586 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 CIPCQ9C0C6 399 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 ARRDC1-AS1Q9H2J1 176 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 FAM204AQ9H8W3 233 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 CD248Q9HCU0 757 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 FAM207AQ9NSI2 230 aaPredicted RBP17.28■□□□□ 0.36
PKP3-209ENST00000533069 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.28■□□□□ 0.36
PKP3-209ENST00000533069 STON1Q9Y6Q2 735 aa17.28■□□□□ 0.36
PKP3-209ENST00000533069 TBL1XO60907 577 aa17.27■□□□□ 0.36
PKP3-209ENST00000533069 ZNF217O75362 1048 aa17.27■□□□□ 0.36
PKP3-209ENST00000533069 DAB1O75553 588 aa17.27■□□□□ 0.36
PKP3-209ENST00000533069 HLA-FP30511 346 aa17.27■□□□□ 0.36
PKP3-209ENST00000533069 SCNN1AP37088 669 aa17.27■□□□□ 0.36
PKP3-209ENST00000533069 SLC6A3Q01959 620 aa17.27■□□□□ 0.36
PKP3-209ENST00000533069 ARID5AQ03989 594 aa17.27■□□□□ 0.36
PKP3-209ENST00000533069 MTA1Q13330 715 aa17.27■□□□□ 0.36
PKP3-209ENST00000533069 EIF4EBP2Q13542 120 aaPredicted RBP17.27■□□□□ 0.36
PKP3-209ENST00000533069 TAF5Q15542 800 aa17.27■□□□□ 0.36
PKP3-209ENST00000533069 MAP7D1Q3KQU3 841 aa17.27■□□□□ 0.36
PKP3-209ENST00000533069 RFWD3Q6PCD5 774 aa17.27■□□□□ 0.36
PKP3-209ENST00000533069 PRR23CQ6ZRP0 262 aa17.27■□□□□ 0.36
PKP3-209ENST00000533069 DEFB106AQ8N104 65 aa17.27■□□□□ 0.36
PKP3-209ENST00000533069 ZNF397Q8NF99 534 aaPredicted RBP17.27■□□□□ 0.36
PKP3-209ENST00000533069 EPS8L1Q8TE68 723 aa17.27■□□□□ 0.36
PKP3-209ENST00000533069 DDX1Q92499 740 aaKnown RBP17.27■□□□□ 0.36
PKP3-209ENST00000533069 RMDN1Q96DB5 314 aa17.27■□□□□ 0.36
PKP3-209ENST00000533069 SLC12A6Q9UHW9 1150 aa17.27■□□□□ 0.36
PKP3-209ENST00000533069 GGA2Q9UJY4 613 aa17.27■□□□□ 0.36
PKP3-209ENST00000533069 INVSQ9Y283 1065 aa17.27■□□□□ 0.36
PKP3-209ENST00000533069 SIK3Q9Y2K2 1263 aa17.27■□□□□ 0.36
PKP3-209ENST00000533069 GOLGA6L7A0A1B0GV03 622 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 A0A1W2PQC6 194 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 GOLGA6L6A8MZA4 724 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 MOCS2O96007 188 aaPredicted RBP17.26■□□□□ 0.35
PKP3-209ENST00000533069 ZNF806P0C7X5 589 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 PABPC1P11940 636 aaKnown RBP17.26■□□□□ 0.35
PKP3-209ENST00000533069 NDUFV2P19404 249 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 CCR1P32246 355 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 MPLP40238 635 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 IL12RB1P42701 662 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 SGSHP51688 502 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 ZNF75DP51815 510 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 POLR2FP61218 127 aaKnown RBP17.26■□□□□ 0.35
PKP3-209ENST00000533069 ZNF234Q14588 700 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 PUM1Q14671 1186 aaKnown RBP eCLIP17.26■□□□□ 0.35
PKP3-209ENST00000533069 ZC3H12AQ5D1E8 599 aaKnown RBP17.26■□□□□ 0.35
PKP3-209ENST00000533069 MS4A13Q5J8X5 152 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 SPDYCQ5MJ68 293 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 KIAA1211LQ6NV74 962 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 LPCAT2Q7L5N7 544 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 APTXQ7Z2E3 356 aaKnown RBP17.26■□□□□ 0.35
PKP3-209ENST00000533069 KIAA0907Q7Z7F0 614 aaPredicted RBP17.26■□□□□ 0.35
PKP3-209ENST00000533069 NOP9Q86U38 636 aaKnown RBP17.26■□□□□ 0.35
PKP3-209ENST00000533069 MFN1Q8IWA4 741 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 CCDC117Q8IWD4 279 aaPredicted RBP17.26■□□□□ 0.35
PKP3-209ENST00000533069 ATP6V0D2Q8N8Y2 350 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 PRICKLE1Q96MT3 831 aaPredicted RBP17.26■□□□□ 0.35
PKP3-209ENST00000533069 SPAG5Q96R06 1193 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 RTN4Q9NQC3 1192 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms