RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 PENKP01210 267 aaPredicted RBP25.74■■□□□ 1.71
USP48-214ENST00000532737 TYRP14679 529 aa25.74■■□□□ 1.71
USP48-214ENST00000532737 AOC1P19801 751 aa25.74■■□□□ 1.71
USP48-214ENST00000532737 RDXP35241 583 aaKnown RBP25.74■■□□□ 1.71
USP48-214ENST00000532737 CLCN5P51795 746 aa25.74■■□□□ 1.71
USP48-214ENST00000532737 GALCP54803 685 aa25.74■■□□□ 1.71
USP48-214ENST00000532737 OGDHQ02218 1023 aa25.74■■□□□ 1.71
USP48-214ENST00000532737 FZD5Q13467 585 aa25.74■■□□□ 1.71
USP48-214ENST00000532737 CDO1Q16878 200 aa25.74■■□□□ 1.71
USP48-214ENST00000532737 TMEM196Q5HYL7 178 aa25.74■■□□□ 1.71
USP48-214ENST00000532737 FYB2Q5VWT5 728 aa25.74■■□□□ 1.71
USP48-214ENST00000532737 RFWD3Q6PCD5 774 aa25.74■■□□□ 1.71
USP48-214ENST00000532737 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.74■■□□□ 1.71
USP48-214ENST00000532737 ETFBKMTQ8IXQ9 262 aa25.74■■□□□ 1.71
USP48-214ENST00000532737 CCDC105Q8IYK2 499 aa25.74■■□□□ 1.71
USP48-214ENST00000532737 CENPIQ92674 756 aaPredicted RBP25.74■■□□□ 1.71
USP48-214ENST00000532737 CD101Q93033 1021 aa25.74■■□□□ 1.71
USP48-214ENST00000532737 BTN2A3PQ96KV6 586 aa25.74■■□□□ 1.71
USP48-214ENST00000532737 WDCPQ9H6R7 721 aa25.74■■□□□ 1.71
USP48-214ENST00000532737 SLC12A6Q9UHW9 1150 aa25.74■■□□□ 1.71
USP48-214ENST00000532737 SIT1Q9Y3P8 196 aa25.74■■□□□ 1.71
USP48-214ENST00000532737 MYOFQ9NZM1 2061 aa25.74■■□□□ 1.71
USP48-214ENST00000532737 ANKRD62A6NC57 917 aa25.73■■□□□ 1.71
USP48-214ENST00000532737 TMEM191CA6NGB0 347 aa25.73■■□□□ 1.71
USP48-214ENST00000532737 I6L893 689 aaPredicted RBP25.73■■□□□ 1.71
USP48-214ENST00000532737 ZNF143P52747 638 aaPredicted RBP25.73■■□□□ 1.71
USP48-214ENST00000532737 MESP2Q0VG99 397 aa25.73■■□□□ 1.71
USP48-214ENST00000532737 FSTL4Q6MZW2 842 aa25.73■■□□□ 1.71
USP48-214ENST00000532737 SND1Q7KZF4 910 aaKnown RBP eCLIP25.73■■□□□ 1.71
USP48-214ENST00000532737 MYEOVQ96EZ4 313 aa25.73■■□□□ 1.71
USP48-214ENST00000532737 OSBPL6Q9BZF3 934 aa25.73■■□□□ 1.71
USP48-214ENST00000532737 TRIM7Q9C029 511 aa25.73■■□□□ 1.71
USP48-214ENST00000532737 GRPEL1Q9HAV7 217 aa25.73■■□□□ 1.71
USP48-214ENST00000532737 ARHGEF38Q9NXL2 777 aa25.73■■□□□ 1.71
USP48-214ENST00000532737 IMPACTQ9P2X3 320 aa25.73■■□□□ 1.71
USP48-214ENST00000532737 GOLGA6L3A6NEY3 463 aa25.72■■□□□ 1.71
USP48-214ENST00000532737 CCP110O43303 1012 aa25.72■■□□□ 1.71
USP48-214ENST00000532737 TULP3O75386 442 aa25.72■■□□□ 1.71
USP48-214ENST00000532737 DCNP07585 359 aaKnown RBP25.72■■□□□ 1.71
USP48-214ENST00000532737 SGSHP51688 502 aa25.72■■□□□ 1.71
USP48-214ENST00000532737 MPPE1Q53F39 396 aa25.72■■□□□ 1.71
USP48-214ENST00000532737 BRMS1LQ5PSV4 323 aa25.72■■□□□ 1.71
USP48-214ENST00000532737 PIK3R6Q5UE93 754 aa25.72■■□□□ 1.71
USP48-214ENST00000532737 RAP1GAP2Q684P5 730 aa25.72■■□□□ 1.71
USP48-214ENST00000532737 STRADAQ7RTN6 431 aa25.72■■□□□ 1.71
USP48-214ENST00000532737 FAM131BQ86XD5 332 aa25.72■■□□□ 1.71
USP48-214ENST00000532737 TMEM105Q8N8V8 129 aa25.72■■□□□ 1.71
USP48-214ENST00000532737 ARHGEF26Q96DR7 871 aa25.72■■□□□ 1.71
USP48-214ENST00000532737 TMA16Q96EY4 203 aaKnown RBP25.72■■□□□ 1.71
USP48-214ENST00000532737 DDX50Q9BQ39 737 aaKnown RBP25.72■■□□□ 1.71
USP48-214ENST00000532737 CNPY3Q9BT09 278 aa25.72■■□□□ 1.71
USP48-214ENST00000532737 PACSIN1Q9BY11 444 aa25.72■■□□□ 1.71
USP48-214ENST00000532737 TKTL2Q9H0I9 626 aa25.72■■□□□ 1.71
USP48-214ENST00000532737 TMPRSS4Q9NRS4 437 aa25.72■■□□□ 1.71
USP48-214ENST00000532737 TMEM51Q9NW97 253 aa25.72■■□□□ 1.71
USP48-214ENST00000532737 SCINQ9Y6U3 715 aa25.72■■□□□ 1.71
USP48-214ENST00000532737 TRIM24O15164 1050 aa25.71■■□□□ 1.71
USP48-214ENST00000532737 CACNG3O60359 315 aa25.71■■□□□ 1.71
USP48-214ENST00000532737 PAGE1O75459 146 aa25.71■■□□□ 1.71
USP48-214ENST00000532737 CYBBP04839 570 aa25.71■■□□□ 1.71
USP48-214ENST00000532737 CYP1A2P05177 515 aa25.71■■□□□ 1.71
USP48-214ENST00000532737 CHRNB1P11230 501 aa25.71■■□□□ 1.71
USP48-214ENST00000532737 FECHP22830 423 aa25.71■■□□□ 1.71
USP48-214ENST00000532737 HDAC4P56524 1084 aa25.71■■□□□ 1.71
USP48-214ENST00000532737 GRSF1Q12849 480 aaKnown RBP eCLIP25.71■■□□□ 1.71
USP48-214ENST00000532737 MS4A13Q5J8X5 152 aa25.71■■□□□ 1.71
USP48-214ENST00000532737 DDI1Q8WTU0 396 aa25.71■■□□□ 1.71
USP48-214ENST00000532737 FAM172AQ8WUF8 416 aa25.71■■□□□ 1.71
USP48-214ENST00000532737 EZH1Q92800 747 aaPredicted RBP25.71■■□□□ 1.71
USP48-214ENST00000532737 PRICKLE1Q96MT3 831 aaPredicted RBP25.71■■□□□ 1.71
USP48-214ENST00000532737 PNKPQ96T60 521 aa25.71■■□□□ 1.71
USP48-214ENST00000532737 PRMT1Q99873 361 aaKnown RBP25.71■■□□□ 1.71
USP48-214ENST00000532737 LMAN1LQ9HAT1 526 aa25.71■■□□□ 1.71
USP48-214ENST00000532737 MRPL47Q9HD33 250 aaKnown RBP25.71■■□□□ 1.71
USP48-214ENST00000532737 RBM12Q9NTZ6 932 aaKnown RBP25.71■■□□□ 1.71
USP48-214ENST00000532737 EGFP01133 1207 aa25.7■■□□□ 1.7
USP48-214ENST00000532737 TACR2P21452 398 aa25.7■■□□□ 1.7
USP48-214ENST00000532737 EIF2DP41214 584 aaKnown RBP25.7■■□□□ 1.7
USP48-214ENST00000532737 CHSY1Q86X52 802 aa25.7■■□□□ 1.7
USP48-214ENST00000532737 PHTF2Q8N3S3 785 aa25.7■■□□□ 1.7
USP48-214ENST00000532737 EXOC4Q96A65 974 aa25.7■■□□□ 1.7
USP48-214ENST00000532737 CLDN23Q96B33 292 aa25.7■■□□□ 1.7
USP48-214ENST00000532737 XPO6Q96QU8 1125 aaKnown RBP25.7■■□□□ 1.7
USP48-214ENST00000532737 DNAJC17Q9NVM6 304 aaKnown RBP25.7■■□□□ 1.7
USP48-214ENST00000532737 DLGAP2Q9P1A6 1054 aa25.7■■□□□ 1.7
USP48-214ENST00000532737 CLEC4EQ9ULY5 219 aa25.7■■□□□ 1.7
USP48-214ENST00000532737 PAXBP1Q9Y5B6 917 aa25.7■■□□□ 1.7
USP48-214ENST00000532737 HS3ST4Q9Y661 456 aa25.7■■□□□ 1.7
USP48-214ENST00000532737 H2AFZP0C0S5 128 aa25.69■■□□□ 1.7
USP48-214ENST00000532737 CISD3P0C7P0 127 aa25.69■■□□□ 1.7
USP48-214ENST00000532737 DRD1P21728 446 aa25.69■■□□□ 1.7
USP48-214ENST00000532737 HOXD9P28356 352 aaPredicted RBP25.69■■□□□ 1.7
USP48-214ENST00000532737 KDSRQ06136 332 aa25.69■■□□□ 1.7
USP48-214ENST00000532737 ZNF252P-AS1Q0IIN9 211 aa25.69■■□□□ 1.7
USP48-214ENST00000532737 CCINQ13939 588 aa25.69■■□□□ 1.7
USP48-214ENST00000532737 H2AFVQ71UI9 128 aa25.69■■□□□ 1.7
USP48-214ENST00000532737 LGI2Q8N0V4 545 aa25.69■■□□□ 1.7
USP48-214ENST00000532737 IRX2Q9BZI1 471 aaPredicted RBP25.69■■□□□ 1.7
USP48-214ENST00000532737 ARHGEF4Q9NR80 690 aa25.69■■□□□ 1.7
USP48-214ENST00000532737 DEC1Q9P2X7 70 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms