RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 TAC4Q86UU9 113 aa17.9■□□□□ 0.46
PHRF1-204ENST00000532550 TMEFF1Q8IYR6 380 aa17.9■□□□□ 0.46
PHRF1-204ENST00000532550 FRMD1Q8N878 549 aa17.9■□□□□ 0.46
PHRF1-204ENST00000532550 ZNF557Q8N988 423 aaPredicted RBP17.9■□□□□ 0.46
PHRF1-204ENST00000532550 WFIKKN2Q8TEU8 576 aa17.9■□□□□ 0.46
PHRF1-204ENST00000532550 SLC39A13Q96H72 371 aa17.9■□□□□ 0.46
PHRF1-204ENST00000532550 LSM14BQ9BX40 385 aaKnown RBP17.9■□□□□ 0.46
PHRF1-204ENST00000532550 VPS16Q9H269 839 aa17.9■□□□□ 0.46
PHRF1-204ENST00000532550 SMOC1Q9H4F8 434 aa17.9■□□□□ 0.46
PHRF1-204ENST00000532550 CALCOCO1Q9P1Z2 691 aa17.9■□□□□ 0.46
PHRF1-204ENST00000532550 SLC12A6Q9UHW9 1150 aa17.9■□□□□ 0.46
PHRF1-204ENST00000532550 PLA2G4CQ9UP65 541 aa17.9■□□□□ 0.46
PHRF1-204ENST00000532550 MOCS2O96007 188 aaPredicted RBP17.89■□□□□ 0.45
PHRF1-204ENST00000532550 APOEP02649 317 aa17.89■□□□□ 0.45
PHRF1-204ENST00000532550 UCHL3P15374 230 aa17.89■□□□□ 0.45
PHRF1-204ENST00000532550 NDUFV2P19404 249 aa17.89■□□□□ 0.45
PHRF1-204ENST00000532550 HLA-FP30511 346 aa17.89■□□□□ 0.45
PHRF1-204ENST00000532550 SLC6A4P31645 630 aa17.89■□□□□ 0.45
PHRF1-204ENST00000532550 IL12RB1P42701 662 aa17.89■□□□□ 0.45
PHRF1-204ENST00000532550 CDK17Q00537 523 aa17.89■□□□□ 0.45
PHRF1-204ENST00000532550 ZNF234Q14588 700 aa17.89■□□□□ 0.45
PHRF1-204ENST00000532550 TAF5Q15542 800 aa17.89■□□□□ 0.45
PHRF1-204ENST00000532550 TMEM215Q68D42 235 aa17.89■□□□□ 0.45
PHRF1-204ENST00000532550 C11orf57Q6ZUT1 292 aaPredicted RBP17.89■□□□□ 0.45
PHRF1-204ENST00000532550 CHST9Q7L1S5 443 aa17.89■□□□□ 0.45
PHRF1-204ENST00000532550 CYP2U1Q7Z449 544 aa17.89■□□□□ 0.45
PHRF1-204ENST00000532550 CCDC117Q8IWD4 279 aaPredicted RBP17.89■□□□□ 0.45
PHRF1-204ENST00000532550 HJURPQ8NCD3 748 aaPredicted RBP17.89■□□□□ 0.45
PHRF1-204ENST00000532550 C1orf131Q8NDD1 294 aaKnown RBP17.89■□□□□ 0.45
PHRF1-204ENST00000532550 STK33Q9BYT3 514 aa17.89■□□□□ 0.45
PHRF1-204ENST00000532550 CD248Q9HCU0 757 aa17.89■□□□□ 0.45
PHRF1-204ENST00000532550 ABCB8Q9NUT2 735 aa17.89■□□□□ 0.45
PHRF1-204ENST00000532550 FANCLQ9NW38 375 aa17.89■□□□□ 0.45
PHRF1-204ENST00000532550 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.89■□□□□ 0.45
PHRF1-204ENST00000532550 ASNSD1Q9NWL6 643 aa17.89■□□□□ 0.45
PHRF1-204ENST00000532550 STIM2Q9P246 746 aa17.89■□□□□ 0.45
PHRF1-204ENST00000532550 TJP2Q9UDY2 1190 aa17.89■□□□□ 0.45
PHRF1-204ENST00000532550 MBD1Q9UIS9 605 aaPredicted RBP17.89■□□□□ 0.45
PHRF1-204ENST00000532550 GGA2Q9UJY4 613 aa17.89■□□□□ 0.45
PHRF1-204ENST00000532550 FHOD1Q9Y613 1164 aa17.89■□□□□ 0.45
PHRF1-204ENST00000532550 DNAH14Q0VDD8 3507 aa17.89■□□□□ 0.45
PHRF1-204ENST00000532550 SLC30A4O14863 429 aa17.88■□□□□ 0.45
PHRF1-204ENST00000532550 AP5Z1O43299 807 aa17.88■□□□□ 0.45
PHRF1-204ENST00000532550 HSF2BPO75031 334 aa17.88■□□□□ 0.45
PHRF1-204ENST00000532550 SGSHP51688 502 aa17.88■□□□□ 0.45
PHRF1-204ENST00000532550 ENPP2Q13822 863 aa17.88■□□□□ 0.45
PHRF1-204ENST00000532550 KRT31Q15323 416 aa17.88■□□□□ 0.45
PHRF1-204ENST00000532550 STX1AQ16623 288 aa17.88■□□□□ 0.45
PHRF1-204ENST00000532550 ZC3H12AQ5D1E8 599 aaKnown RBP17.88■□□□□ 0.45
PHRF1-204ENST00000532550 FKBP15Q5T1M5 1219 aa17.88■□□□□ 0.45
PHRF1-204ENST00000532550 CDKAL1Q5VV42 579 aa17.88■□□□□ 0.45
PHRF1-204ENST00000532550 NADSYN1Q6IA69 706 aa17.88■□□□□ 0.45
PHRF1-204ENST00000532550 DEFB106AQ8N104 65 aa17.88■□□□□ 0.45
PHRF1-204ENST00000532550 AHI1Q8N157 1196 aa17.88■□□□□ 0.45
PHRF1-204ENST00000532550 TMEM35BQ8NCS4 154 aa17.88■□□□□ 0.45
PHRF1-204ENST00000532550 ANKRD20A12PQ8NF67 263 aa17.88■□□□□ 0.45
PHRF1-204ENST00000532550 SORCS1Q8WY21 1168 aa17.88■□□□□ 0.45
PHRF1-204ENST00000532550 PIGKQ92643 395 aa17.88■□□□□ 0.45
PHRF1-204ENST00000532550 RNF34Q969K3 372 aa17.88■□□□□ 0.45
PHRF1-204ENST00000532550 MRGPRX1Q96LB2 322 aa17.88■□□□□ 0.45
PHRF1-204ENST00000532550 NAA15Q9BXJ9 866 aaKnown RBP17.88■□□□□ 0.45
PHRF1-204ENST00000532550 PRDM16Q9HAZ2 1276 aa17.88■□□□□ 0.45
PHRF1-204ENST00000532550 PLCB1Q9NQ66 1216 aa17.88■□□□□ 0.45
PHRF1-204ENST00000532550 DCDC2BA2VCK2 349 aa17.87■□□□□ 0.45
PHRF1-204ENST00000532550 KHNYNO15037 678 aaKnown RBP17.87■□□□□ 0.45
PHRF1-204ENST00000532550 GRAP2O75791 330 aa17.87■□□□□ 0.45
PHRF1-204ENST00000532550 ATP5BP06576 529 aaKnown RBP17.87■□□□□ 0.45
PHRF1-204ENST00000532550 EPHX1P07099 455 aa17.87■□□□□ 0.45
PHRF1-204ENST00000532550 SLC2A3P11169 496 aa17.87■□□□□ 0.45
PHRF1-204ENST00000532550 PABPC1P11940 636 aaKnown RBP17.87■□□□□ 0.45
PHRF1-204ENST00000532550 CYP11B1P15538 503 aa17.87■□□□□ 0.45
PHRF1-204ENST00000532550 POLR2EP19388 210 aaKnown RBP17.87■□□□□ 0.45
PHRF1-204ENST00000532550 SLC6A3Q01959 620 aa17.87■□□□□ 0.45
PHRF1-204ENST00000532550 RPL6Q02878 288 aaKnown RBP17.87■□□□□ 0.45
PHRF1-204ENST00000532550 FUT11Q495W5 492 aa17.87■□□□□ 0.45
PHRF1-204ENST00000532550 MS4A13Q5J8X5 152 aa17.87■□□□□ 0.45
PHRF1-204ENST00000532550 CCDC183Q5T5S1 534 aa17.87■□□□□ 0.45
PHRF1-204ENST00000532550 IL31Q6EBC2 164 aa17.87■□□□□ 0.45
PHRF1-204ENST00000532550 KIAA1324Q6UXG2 1013 aaKnown RBP17.87■□□□□ 0.45
PHRF1-204ENST00000532550 SERPINA13PQ6UXR4 307 aa17.87■□□□□ 0.45
PHRF1-204ENST00000532550 FAM183BPQ6ZVS7 135 aa17.87■□□□□ 0.45
PHRF1-204ENST00000532550 ARMCX6Q7L4S7 300 aa17.87■□□□□ 0.45
PHRF1-204ENST00000532550 KIAA0907Q7Z7F0 614 aaPredicted RBP17.87■□□□□ 0.45
PHRF1-204ENST00000532550 MFN1Q8IWA4 741 aa17.87■□□□□ 0.45
PHRF1-204ENST00000532550 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.87■□□□□ 0.45
PHRF1-204ENST00000532550 ATP6V0D2Q8N8Y2 350 aa17.87■□□□□ 0.45
PHRF1-204ENST00000532550 FIBINQ8TAL6 211 aa17.87■□□□□ 0.45
PHRF1-204ENST00000532550 BTN2A3PQ96KV6 586 aa17.87■□□□□ 0.45
PHRF1-204ENST00000532550 SLC2A13Q96QE2 648 aa17.87■□□□□ 0.45
PHRF1-204ENST00000532550 SLC6A17Q9H1V8 727 aa17.87■□□□□ 0.45
PHRF1-204ENST00000532550 FAM204AQ9H8W3 233 aa17.87■□□□□ 0.45
PHRF1-204ENST00000532550 CYP8B1Q9UNU6 501 aa17.87■□□□□ 0.45
PHRF1-204ENST00000532550 PLXND1Q9Y4D7 1925 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 SYNJ2BP-COX16A0A087WUM0 186 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 IGHV1OR15-9A0A0B4J2B8 117 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 NDUFS2O75306 463 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 IGLV3-25P01717 112 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 ERBB2P04626 1255 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 CDK11BP21127 795 aaKnown RBP17.86■□□□□ 0.45
PHRF1-204ENST00000532550 ABCB4P21439 1286 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms