RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 ZYG11BQ9C0D3 744 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 IARS2Q9NSE4 1012 aaKnown RBP16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 SEPT3Q9UH03 358 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 TARSL2A2RTX5 802 aaKnown RBP16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 TBC1D4O60343 1298 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 IL1BP01584 269 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 KDELR1P24390 212 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 RAB30Q15771 203 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 PTPN20Q4JDL3 420 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 NPNTQ6UXI9 565 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 SLC39A5Q6ZMH5 540 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 PHACTR4Q8IZ21 702 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 HJURPQ8NCD3 748 aaPredicted RBP16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 FCRL2Q96LA5 508 aaPredicted RBP16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 EDNRBP24530 442 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 WASP42768 502 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 MARSP56192 900 aaKnown RBP16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 CCNG2Q16589 344 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 LCLAT1Q6UWP7 414 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 TRMT10CQ7L0Y3 403 aaKnown RBP16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 ARL14EPQ8N8R7 260 aaPredicted RBP16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 FBXO36Q8NEA4 188 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 CLPBQ9H078 707 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 PPARGC1AQ9UBK2 798 aaKnown RBP16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 TRMT6Q9UJA5 497 aaKnown RBP16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 RAD23BP54727 409 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 TBX2Q13207 712 aaPredicted RBP16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 ACAP1Q15027 740 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 JOSD2Q8TAC2 188 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 PTPN2P17706 415 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 ITGB6P18564 788 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 HMOX2P30519 316 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 VCPP55072 806 aaKnown RBP16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 AADACL2Q6P093 401 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 MIR1-1HGQ9H1L0 117 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 PCDHA3Q9Y5H8 950 aa16.14■□□□□ 0.17
PPFIA1-222ENST00000532504 COL2A1P02458 1487 aaPredicted RBP16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 GOT1P17174 413 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 IFT88Q13099 833 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 MMRN1Q13201 1228 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 ELAC2Q9BQ52 826 aaKnown RBP16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 SMAPO00193 183 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 GSTA4O15217 222 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 RBL1P28749 1068 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 ART3Q13508 389 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 MEA1Q16626 185 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 ANKRD20A8PQ5CZ79 823 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 TRIM55Q9BYV6 548 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 RHOBTB2Q9BYZ6 727 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 APOBEC3GQ9HC16 384 aaKnown RBP16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 KIF3CO14782 793 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 PPEF2O14830 753 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 TMCC1O94876 653 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 CORO1AP31146 461 aaKnown RBP16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 FAM124AQ86V42 546 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 SERINC5Q86VE9 423 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 PHF13Q86YI8 300 aaPredicted RBP16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 TBC1D19Q8N5T2 526 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 LRGUKQ96M69 825 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 PSMC3IPQ9P2W1 217 aaPredicted RBP16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 AGRPO00253 132 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 ADH1CP00326 375 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 ATP4AP20648 1035 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 PPP3CCP48454 512 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 KDSRQ06136 332 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 SPDYAQ5MJ70 313 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 ARMC12Q5T9G4 340 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 ZNF557Q8N988 423 aaPredicted RBP16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 GIMAP7Q8NHV1 300 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 SGIP1Q9BQI5 828 aa16.13■□□□□ 0.17
PPFIA1-222ENST00000532504 PDZK1P1A8MUH7 402 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 MYO1DO94832 1006 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 ATG7O95352 703 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 CYP4F8P98187 520 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 SGO1Q5FBB7 561 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 AARS2Q5JTZ9 985 aaKnown RBP16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 PMF1Q6P1K2 205 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 LRRC40Q9H9A6 602 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 NSMCE4AQ9NXX6 385 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 DNPEPQ9ULA0 475 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 DAB1O75553 588 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 ANP32DO95626 131 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 BAG2O95816 211 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 IL1RL1Q01638 556 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 TTLL9Q3SXZ7 439 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 RFWD3Q6PCD5 774 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 ACAD11Q709F0 780 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 RIPOR3Q96MK2 946 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 BCAP29Q9UHQ4 241 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 ADAMTS5Q9UNA0 930 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 FGF10O15520 208 aaPredicted RBP16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 SERPINA4P29622 427 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 SLC11A1P49279 550 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 SERPINB9P50453 376 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 TTC7BQ86TV6 843 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 OOSP2Q86WS3 158 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 SLC4A11Q8NBS3 891 aa16.12■□□□□ 0.17
PPFIA1-222ENST00000532504 STN1Q9H668 368 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms