RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 PRR20EP86478 221 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 PRR20CP86479 221 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 PRR20DP86480 221 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 PRR20BP86481 221 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 PRR20AP86496 221 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 ATP11AP98196 1134 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 FOXC1Q12948 553 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 ZNF77Q15935 545 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 C15orf59Q2T9L4 293 aaPredicted RBP12.99□□□□□ -0.33
COPB1-208ENST00000532088 LRRC38Q5VT99 294 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 HTR3DQ70Z44 454 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 SLFN11Q7Z7L1 901 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 MIB1Q86YT6 1006 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 ARID3BQ8IVW6 561 aaPredicted RBP12.99□□□□□ -0.33
COPB1-208ENST00000532088 ZDHHC14Q8IZN3 488 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 TDRD5Q8NAT2 981 aaKnown RBP12.99□□□□□ -0.33
COPB1-208ENST00000532088 ING5Q8WYH8 240 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 USP13Q92995 863 aaPredicted RBP12.99□□□□□ -0.33
COPB1-208ENST00000532088 ELSPBP1Q96BH3 223 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 FCRL2Q96LA5 508 aaPredicted RBP12.99□□□□□ -0.33
COPB1-208ENST00000532088 ZSWIM3Q96MP5 696 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 MYADMQ96S97 322 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 CYP2S1Q96SQ9 504 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 TRIM7Q9C029 511 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 PIGVQ9NUD9 493 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 ARHGEF38Q9NXL2 777 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 PRKAG3Q9UGI9 489 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 SLC12A6Q9UHW9 1150 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 STOML2Q9UJZ1 356 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 LSM7Q9UK45 103 aaKnown RBP12.99□□□□□ -0.33
COPB1-208ENST00000532088 NUDT5Q9UKK9 219 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 TFR2Q9UP52 801 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 ZKSCAN5Q9Y2L8 839 aa12.99□□□□□ -0.33
COPB1-208ENST00000532088 HELZP42694 1942 aaKnown RBP12.99□□□□□ -0.33
COPB1-208ENST00000532088 A0A0U1RQJ8 604 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 ANHXE9PGG2 379 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 LEFTY2O00292 366 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 MDM4O15151 490 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 BUB1BO60566 1050 aaPredicted RBP12.98□□□□□ -0.33
COPB1-208ENST00000532088 ECI2O75521 394 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 STC2O76061 302 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 TFE3P19532 575 aaPredicted RBP12.98□□□□□ -0.33
COPB1-208ENST00000532088 ZNF135P52742 658 aaPredicted RBP12.98□□□□□ -0.33
COPB1-208ENST00000532088 SCAPQ12770 1279 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 NME3Q13232 169 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 MESDQ14696 234 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 HADHQ16836 314 aaKnown RBP12.98□□□□□ -0.33
COPB1-208ENST00000532088 ARL13BQ3SXY8 428 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 FAM78AQ5JUQ0 283 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 POLNQ7Z5Q5 900 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 ATP6V0D2Q8N8Y2 350 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 LRRC57Q8N9N7 239 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 TRIM58Q8NG06 486 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 ADAMTS19Q8TE59 1207 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 DEPDC1BQ8WUY9 529 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 TEKT4Q8WW24 435 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 ATXN2LQ8WWM7 1075 aaKnown RBP12.98□□□□□ -0.33
COPB1-208ENST00000532088 ATRIPQ8WXE1 791 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 OTUB2Q96DC9 234 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 BTBD6Q96KE9 485 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 BTN2A3PQ96KV6 586 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 ALS2CR12Q96Q35 445 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 HAPLN3Q96S86 360 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 WDCPQ9H6R7 721 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 ZFP14Q9HCL3 533 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 LZTFL1Q9NQ48 299 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 CALCOCO1Q9P1Z2 691 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 TBC1D14Q9P2M4 693 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 TRIM10Q9UDY6 481 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 GUCA1BQ9UMX6 200 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 ALG6Q9Y672 507 aa12.98□□□□□ -0.33
COPB1-208ENST00000532088 BRWD1Q9NSI6 2320 aa12.97□□□□□ -0.33
COPB1-208ENST00000532088 DOCK8Q8NF50 2099 aa12.97□□□□□ -0.33
COPB1-208ENST00000532088 MACROD2A1Z1Q3 448 aa12.97□□□□□ -0.33
COPB1-208ENST00000532088 GRID2IPA4D2P6 1211 aa12.97□□□□□ -0.33
COPB1-208ENST00000532088 SLC9A3R1O14745 358 aaPredicted RBP12.97□□□□□ -0.33
COPB1-208ENST00000532088 MSI1O43347 362 aaKnown RBP12.97□□□□□ -0.33
COPB1-208ENST00000532088 BUB1O43683 1085 aa12.97□□□□□ -0.33
COPB1-208ENST00000532088 GREM1O60565 184 aa12.97□□□□□ -0.33
COPB1-208ENST00000532088 PRAMEF12O95522 483 aa12.97□□□□□ -0.33
COPB1-208ENST00000532088 FCARP24071 287 aa12.97□□□□□ -0.33
COPB1-208ENST00000532088 MSNP26038 577 aaKnown RBP12.97□□□□□ -0.33
COPB1-208ENST00000532088 MIPP30301 263 aa12.97□□□□□ -0.33
COPB1-208ENST00000532088 SLC11A2P49281 568 aa12.97□□□□□ -0.33
COPB1-208ENST00000532088 NAP1L1P55209 391 aaKnown RBP12.97□□□□□ -0.33
COPB1-208ENST00000532088 ZXDBP98169 803 aa12.97□□□□□ -0.33
COPB1-208ENST00000532088 NRG1Q02297 640 aaPredicted RBP12.97□□□□□ -0.33
COPB1-208ENST00000532088 CDO1Q16878 200 aa12.97□□□□□ -0.33
COPB1-208ENST00000532088 BOLA3Q53S33 107 aa12.97□□□□□ -0.33
COPB1-208ENST00000532088 CC2D1AQ6P1N0 951 aaPredicted RBP12.97□□□□□ -0.33
COPB1-208ENST00000532088 Q6ZNB5 142 aa12.97□□□□□ -0.33
COPB1-208ENST00000532088 DAAM2Q86T65 1068 aa12.97□□□□□ -0.33
COPB1-208ENST00000532088 FAM217AQ8IXS0 508 aa12.97□□□□□ -0.33
COPB1-208ENST00000532088 ARFGAP1Q8N6T3 406 aa12.97□□□□□ -0.33
COPB1-208ENST00000532088 BPIFB1Q8TDL5 484 aa12.97□□□□□ -0.33
COPB1-208ENST00000532088 SH3RF2Q8TEC5 729 aa12.97□□□□□ -0.33
COPB1-208ENST00000532088 C1orf74Q96LT6 269 aa12.97□□□□□ -0.33
COPB1-208ENST00000532088 DDX50Q9BQ39 737 aaKnown RBP12.97□□□□□ -0.33
COPB1-208ENST00000532088 USP18Q9UMW8 372 aa12.97□□□□□ -0.33
COPB1-208ENST00000532088 SH3BP1Q9Y3L3 701 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms