RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 ATXN1P54253 815 aaKnown RBP15□□□□□ -0.01
CPSF1-206ENST00000531480 ATP11AP98196 1134 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 NME3Q13232 169 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 FZD5Q13467 585 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 ACAP1Q15027 740 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 RAB6CQ53S08 254 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 TMEM196Q5HYL7 178 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 MS4A13Q5J8X5 152 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 PIK3R6Q5UE93 754 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 CWF19L1Q69YN2 538 aaKnown RBP15□□□□□ -0.01
CPSF1-206ENST00000531480 DCUN1D2Q6PH85 259 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 ZNF852Q6ZMS4 543 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 H2AFVQ71UI9 128 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 NIPA2Q8N8Q9 360 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 FAM172AQ8WUF8 416 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 NTAN1Q96AB6 310 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 C1orf74Q96LT6 269 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 HAPLN3Q96S86 360 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 NELL2Q99435 816 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 EIF3CQ99613 913 aaKnown RBP15□□□□□ -0.01
CPSF1-206ENST00000531480 TRIM7Q9C029 511 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 RAB6CQ9H0N0 254 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 WDCPQ9H6R7 721 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 TBC1D17Q9HA65 648 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 LTB4R2Q9NPC1 389 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 UVRAGQ9P2Y5 699 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 KMT2EQ8IZD2 1858 aa14.99□□□□□ -0.01
CPSF1-206ENST00000531480 ZDBF2Q9HCK1 2354 aa14.99□□□□□ -0.01
CPSF1-206ENST00000531480 SOWAHDA6NJG2 315 aa14.99□□□□□ -0.01
CPSF1-206ENST00000531480 MTA2O94776 668 aa14.99□□□□□ -0.01
CPSF1-206ENST00000531480 PDGFBP01127 241 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-206ENST00000531480 CLCN5P51795 746 aa14.99□□□□□ -0.01
CPSF1-206ENST00000531480 NRG1Q02297 640 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-206ENST00000531480 SCAPQ12770 1279 aa14.99□□□□□ -0.01
CPSF1-206ENST00000531480 RAD9BQ6WBX8 426 aa14.99□□□□□ -0.01
CPSF1-206ENST00000531480 SND1Q7KZF4 910 aaKnown RBP eCLIP14.99□□□□□ -0.01
CPSF1-206ENST00000531480 C12orf40Q86WS4 652 aa14.99□□□□□ -0.01
CPSF1-206ENST00000531480 SUGP1Q8IWZ8 645 aaKnown RBP14.99□□□□□ -0.01
CPSF1-206ENST00000531480 ZNF683Q8IZ20 524 aa14.99□□□□□ -0.01
CPSF1-206ENST00000531480 ARFGAP1Q8N6T3 406 aa14.99□□□□□ -0.01
CPSF1-206ENST00000531480 TTC8Q8TAM2 541 aa14.99□□□□□ -0.01
CPSF1-206ENST00000531480 FAM3CQ92520 227 aa14.99□□□□□ -0.01
CPSF1-206ENST00000531480 CLDN23Q96B33 292 aa14.99□□□□□ -0.01
CPSF1-206ENST00000531480 PRICKLE1Q96MT3 831 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-206ENST00000531480 BAG1Q99933 345 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-206ENST00000531480 DDX50Q9BQ39 737 aaKnown RBP14.99□□□□□ -0.01
CPSF1-206ENST00000531480 TKTL2Q9H0I9 626 aa14.99□□□□□ -0.01
CPSF1-206ENST00000531480 SLC12A6Q9UHW9 1150 aa14.99□□□□□ -0.01
CPSF1-206ENST00000531480 MRPS17Q9Y2R5 130 aaKnown RBP14.99□□□□□ -0.01
CPSF1-206ENST00000531480 EPN1Q9Y6I3 576 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-206ENST00000531480 ZNF318Q5VUA4 2279 aa14.99□□□□□ -0.01
CPSF1-206ENST00000531480 SYNJ2BP-COX16A0A087WUM0 186 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 GOLGA6L7A0A1B0GV03 622 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 PAGE1O75459 146 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 NDUFA10O95299 355 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 CISD3P0C7P0 127 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 CHRM1P11229 460 aaPredicted RBP14.98□□□□□ -0.01
CPSF1-206ENST00000531480 TYRP14679 529 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 TACR2P21452 398 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 HOXD9P28356 352 aaPredicted RBP14.98□□□□□ -0.01
CPSF1-206ENST00000531480 ADRA1BP35368 520 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 CYLC1P35663 651 aaPredicted RBP14.98□□□□□ -0.01
CPSF1-206ENST00000531480 GALK1P51570 392 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 SGSHP51688 502 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 AIF1P55008 147 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 VCPP55072 806 aaKnown RBP14.98□□□□□ -0.01
CPSF1-206ENST00000531480 CCINQ13939 588 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 MPPE1Q53F39 396 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 TPGS1Q6ZTW0 290 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 FAM131BQ86XD5 332 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 PJA1Q8NG27 643 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 CTNNBL1Q8WYA6 563 aaPredicted RBP14.98□□□□□ -0.01
CPSF1-206ENST00000531480 CD101Q93033 1021 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 MYEOVQ96EZ4 313 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 NUP85Q9BW27 656 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 BBS2Q9BXC9 721 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 SLC2A11Q9BYW1 496 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 COX16Q9P0S2 106 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 DLGAP2Q9P1A6 1054 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 MYO1AQ9UBC5 1043 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 LCMT1Q9UIC8 334 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 SLC27A6Q9Y2P4 619 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 HS3ST4Q9Y661 456 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 MUC6Q6W4X9 2439 aa14.98□□□□□ -0.01
CPSF1-206ENST00000531480 CHD5Q8TDI0 1954 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 IGLV3-10A0A075B6K4 115 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 NEDD8-MDP1E9PL57 170 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 TULP3O75386 442 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 MOCS2O96007 188 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-206ENST00000531480 CYBBP04839 570 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 CHRNB1P11230 501 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 AOC1P19801 751 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 CD72P21854 359 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 PSMA2P25787 234 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 TARSP26639 723 aaKnown RBP14.97□□□□□ -0.01
CPSF1-206ENST00000531480 PCK1P35558 622 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 RPS9P46781 194 aaKnown RBP14.97□□□□□ -0.01
CPSF1-206ENST00000531480 HADHBP55084 474 aaKnown RBP14.97□□□□□ -0.01
CPSF1-206ENST00000531480 AUHQ13825 339 aaKnown RBP14.97□□□□□ -0.01
CPSF1-206ENST00000531480 PIGHQ14442 188 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms