RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 PLEKHG6Q3KR16 790 aa23.18■■□□□ 1.3
TRAPPC4-210ENST00000531290 FNDC3BQ53EP0 1204 aaKnown RBP23.18■■□□□ 1.3
TRAPPC4-210ENST00000531290 MPP7Q5T2T1 576 aa23.18■■□□□ 1.3
TRAPPC4-210ENST00000531290 SCUBE3Q8IX30 993 aa23.18■■□□□ 1.3
TRAPPC4-210ENST00000531290 AHI1Q8N157 1196 aa23.18■■□□□ 1.3
TRAPPC4-210ENST00000531290 ZNF557Q8N988 423 aaPredicted RBP23.18■■□□□ 1.3
TRAPPC4-210ENST00000531290 CADM4Q8NFZ8 388 aa23.18■■□□□ 1.3
TRAPPC4-210ENST00000531290 AZIN2Q96A70 460 aa23.18■■□□□ 1.3
TRAPPC4-210ENST00000531290 DDX50Q9BQ39 737 aaKnown RBP23.18■■□□□ 1.3
TRAPPC4-210ENST00000531290 NUP58Q9BVL2 599 aa23.18■■□□□ 1.3
TRAPPC4-210ENST00000531290 GGA2Q9UJY4 613 aa23.18■■□□□ 1.3
TRAPPC4-210ENST00000531290 THADAQ6YHU6 1953 aa23.18■■□□□ 1.3
TRAPPC4-210ENST00000531290 GOLGA6L7A0A1B0GV03 622 aa23.17■■□□□ 1.3
TRAPPC4-210ENST00000531290 MEI4A8MW99 385 aa23.17■■□□□ 1.3
TRAPPC4-210ENST00000531290 MED7O43513 233 aa23.17■■□□□ 1.3
TRAPPC4-210ENST00000531290 ACSL4O60488 711 aa23.17■■□□□ 1.3
TRAPPC4-210ENST00000531290 OPHN1O60890 802 aa23.17■■□□□ 1.3
TRAPPC4-210ENST00000531290 TBL1XO60907 577 aa23.17■■□□□ 1.3
TRAPPC4-210ENST00000531290 IGLV3-27P01718 113 aa23.17■■□□□ 1.3
TRAPPC4-210ENST00000531290 ATP5BP06576 529 aaKnown RBP23.17■■□□□ 1.3
TRAPPC4-210ENST00000531290 PABPC1P11940 636 aaKnown RBP23.17■■□□□ 1.3
TRAPPC4-210ENST00000531290 MAOBP27338 520 aa23.17■■□□□ 1.3
TRAPPC4-210ENST00000531290 GPD2P43304 727 aa23.17■■□□□ 1.3
TRAPPC4-210ENST00000531290 FOXC1Q12948 553 aa23.17■■□□□ 1.3
TRAPPC4-210ENST00000531290 PIK3R6Q5UE93 754 aa23.17■■□□□ 1.3
TRAPPC4-210ENST00000531290 RFWD3Q6PCD5 774 aa23.17■■□□□ 1.3
TRAPPC4-210ENST00000531290 ENOSF1Q7L5Y1 443 aa23.17■■□□□ 1.3
TRAPPC4-210ENST00000531290 CYB5D2Q8WUJ1 264 aa23.17■■□□□ 1.3
TRAPPC4-210ENST00000531290 FAM149B1Q96BN6 582 aa23.17■■□□□ 1.3
TRAPPC4-210ENST00000531290 CNTN6Q9UQ52 1028 aa23.17■■□□□ 1.3
TRAPPC4-210ENST00000531290 KCNJ18B7U540 433 aa23.16■■□□□ 1.3
TRAPPC4-210ENST00000531290 LETM1O95202 739 aaPredicted RBP23.16■■□□□ 1.3
TRAPPC4-210ENST00000531290 HLA-EP13747 358 aa23.16■■□□□ 1.3
TRAPPC4-210ENST00000531290 COPAP53621 1224 aa23.16■■□□□ 1.3
TRAPPC4-210ENST00000531290 SEMA3BQ13214 749 aa23.16■■□□□ 1.3
TRAPPC4-210ENST00000531290 ADIPOR2Q86V24 386 aa23.16■■□□□ 1.3
TRAPPC4-210ENST00000531290 CACUL1Q86Y37 369 aa23.16■■□□□ 1.3
TRAPPC4-210ENST00000531290 MINDY1Q8N5J2 469 aa23.16■■□□□ 1.3
TRAPPC4-210ENST00000531290 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.16■■□□□ 1.3
TRAPPC4-210ENST00000531290 OR2T3Q8NH03 318 aa23.16■■□□□ 1.3
TRAPPC4-210ENST00000531290 SERPINB11Q96P15 392 aa23.16■■□□□ 1.3
TRAPPC4-210ENST00000531290 TRIM62Q9BVG3 475 aa23.16■■□□□ 1.3
TRAPPC4-210ENST00000531290 STIM2Q9P246 746 aa23.16■■□□□ 1.3
TRAPPC4-210ENST00000531290 KIAA1468Q9P260 1216 aa23.16■■□□□ 1.3
TRAPPC4-210ENST00000531290 RWDD2AQ9UIY3 292 aa23.16■■□□□ 1.3
TRAPPC4-210ENST00000531290 TYW5A2RUC4 315 aaKnown RBP23.15■■□□□ 1.3
TRAPPC4-210ENST00000531290 UPK3BL1B0FP48 263 aa23.15■■□□□ 1.3
TRAPPC4-210ENST00000531290 UPK3BL2E5RIL1 263 aa23.15■■□□□ 1.3
TRAPPC4-210ENST00000531290 CAPN9O14815 690 aa23.15■■□□□ 1.3
TRAPPC4-210ENST00000531290 POLR2EP19388 210 aaKnown RBP23.15■■□□□ 1.3
TRAPPC4-210ENST00000531290 SGSHP51688 502 aa23.15■■□□□ 1.3
TRAPPC4-210ENST00000531290 CAMK2GQ13555 558 aaPredicted RBP23.15■■□□□ 1.3
TRAPPC4-210ENST00000531290 CAMK4Q16566 473 aa23.15■■□□□ 1.3
TRAPPC4-210ENST00000531290 FAM133BQ5BKY9 247 aaKnown RBP23.15■■□□□ 1.3
TRAPPC4-210ENST00000531290 MBLAC2Q68D91 279 aa23.15■■□□□ 1.3
TRAPPC4-210ENST00000531290 DENND1BQ6P3S1 775 aa23.15■■□□□ 1.3
TRAPPC4-210ENST00000531290 KIAA0907Q7Z7F0 614 aaPredicted RBP23.15■■□□□ 1.3
TRAPPC4-210ENST00000531290 CCDC117Q8IWD4 279 aaPredicted RBP23.15■■□□□ 1.3
TRAPPC4-210ENST00000531290 DQX1Q8TE96 717 aaKnown RBP23.15■■□□□ 1.3
TRAPPC4-210ENST00000531290 STK32AQ8WU08 396 aa23.15■■□□□ 1.3
TRAPPC4-210ENST00000531290 DNASE2BQ8WZ79 361 aa23.15■■□□□ 1.3
TRAPPC4-210ENST00000531290 FAM81BQ96LP2 452 aa23.15■■□□□ 1.3
TRAPPC4-210ENST00000531290 MIR1-1HGQ9H1L0 117 aa23.15■■□□□ 1.3
TRAPPC4-210ENST00000531290 TMEM245Q9H330 911 aa23.15■■□□□ 1.3
TRAPPC4-210ENST00000531290 NAALADL1Q9UQQ1 740 aa23.15■■□□□ 1.3
TRAPPC4-210ENST00000531290 TLR6Q9Y2C9 796 aa23.15■■□□□ 1.3
TRAPPC4-210ENST00000531290 NFE2L3Q9Y4A8 694 aa23.15■■□□□ 1.3
TRAPPC4-210ENST00000531290 MYO18AQ92614 2054 aaKnown RBP23.14■■□□□ 1.29
TRAPPC4-210ENST00000531290 THAP12O43422 761 aa23.14■■□□□ 1.29
TRAPPC4-210ENST00000531290 FYNP06241 537 aa23.14■■□□□ 1.29
TRAPPC4-210ENST00000531290 DLDP09622 509 aaKnown RBP23.14■■□□□ 1.29
TRAPPC4-210ENST00000531290 SLC6A4P31645 630 aa23.14■■□□□ 1.29
TRAPPC4-210ENST00000531290 RPL34P49207 117 aaKnown RBP23.14■■□□□ 1.29
TRAPPC4-210ENST00000531290 UBE2HP62256 183 aa23.14■■□□□ 1.29
TRAPPC4-210ENST00000531290 MFN1Q8IWA4 741 aa23.14■■□□□ 1.29
TRAPPC4-210ENST00000531290 HJURPQ8NCD3 748 aaPredicted RBP23.14■■□□□ 1.29
TRAPPC4-210ENST00000531290 ZNF606Q8WXB4 792 aa23.14■■□□□ 1.29
TRAPPC4-210ENST00000531290 CRACR2AQ9BSW2 395 aa23.14■■□□□ 1.29
TRAPPC4-210ENST00000531290 EPG5Q9HCE0 2579 aa23.13■■□□□ 1.29
TRAPPC4-210ENST00000531290 A0A1B0GTW7 788 aa23.13■■□□□ 1.29
TRAPPC4-210ENST00000531290 METTL12A8MUP2 240 aa23.13■■□□□ 1.29
TRAPPC4-210ENST00000531290 IGLV3-19P01714 112 aa23.13■■□□□ 1.29
TRAPPC4-210ENST00000531290 GNA15P30679 374 aa23.13■■□□□ 1.29
TRAPPC4-210ENST00000531290 CD70P32970 193 aa23.13■■□□□ 1.29
TRAPPC4-210ENST00000531290 USP8P40818 1118 aa23.13■■□□□ 1.29
TRAPPC4-210ENST00000531290 NNTQ13423 1086 aa23.13■■□□□ 1.29
TRAPPC4-210ENST00000531290 MEA1Q16626 185 aa23.13■■□□□ 1.29
TRAPPC4-210ENST00000531290 DCAF12L1Q5VU92 463 aa23.13■■□□□ 1.29
TRAPPC4-210ENST00000531290 BEND5Q7L4P6 421 aa23.13■■□□□ 1.29
TRAPPC4-210ENST00000531290 PIP4P1Q86T03 277 aa23.13■■□□□ 1.29
TRAPPC4-210ENST00000531290 FAM124AQ86V42 546 aa23.13■■□□□ 1.29
TRAPPC4-210ENST00000531290 ZNF366Q8N895 744 aa23.13■■□□□ 1.29
TRAPPC4-210ENST00000531290 OR2I1PQ8NGU4 316 aa23.13■■□□□ 1.29
TRAPPC4-210ENST00000531290 FCRL2Q96LA5 508 aaPredicted RBP23.13■■□□□ 1.29
TRAPPC4-210ENST00000531290 MED15Q96RN5 788 aa23.13■■□□□ 1.29
TRAPPC4-210ENST00000531290 SLC4A5Q9BY07 1137 aa23.13■■□□□ 1.29
TRAPPC4-210ENST00000531290 ZDHHC5Q9C0B5 715 aa23.13■■□□□ 1.29
TRAPPC4-210ENST00000531290 LHX5Q9H2C1 402 aa23.13■■□□□ 1.29
TRAPPC4-210ENST00000531290 FBRSQ9HAH7 460 aa23.13■■□□□ 1.29
TRAPPC4-210ENST00000531290 SUN2Q9UH99 717 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms