RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 TRIM49P0CI25 452 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 TRIM49CP0CI26 452 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 CD58P19256 250 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 HOXD9P28356 352 aaPredicted RBP9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 HLA-FP30511 346 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 ZNF132P52740 706 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 CLDN6P56747 220 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 CYP4F3Q08477 520 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 GOLGA8FQ08AF8 430 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 GOLGA8DPQ0D2H9 430 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 EFEMP1Q12805 493 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 CAMK2GQ13555 558 aaPredicted RBP9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 RAB41Q5JT25 222 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 RESP18Q5W5W9 173 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 ANKS1BQ7Z6G8 1248 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 ADIPOR2Q86V24 386 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 DENND1CQ8IV53 801 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 RNF214Q8ND24 703 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 LSM14AQ8ND56 463 aaKnown RBP9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 PIP4K2CQ8TBX8 421 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 TMC2Q8TDI7 906 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 NDRG1Q92597 394 aaKnown RBP9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 PRCCQ92733 491 aaPredicted RBP9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 BIRC7Q96CA5 298 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 ARID3AQ99856 593 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 DUSP16Q9BY84 665 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 TMEM245Q9H330 911 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 CLSTN2Q9H4D0 955 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 PCDHA7Q9UN72 937 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 PCDHGB2Q9Y5G2 931 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 GOLGA8CPA6NN73 597 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 C10orf142B7Z368 130 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 H0Y8X5 98 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 IKBKBO14920 756 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 NPC1O15118 1278 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 TPM3P06753 285 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 OXTRP30559 389 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 PIK3CAP42336 1068 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 ABCG1P45844 678 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 GCLMP48507 274 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 PSEN1P49768 467 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 SGSHP51688 502 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 CFHR1Q03591 330 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 EIF4HQ15056 248 aaKnown RBP9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 SMAD1Q15797 465 aaKnown RBP9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 KMT5BQ4FZB7 885 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 CPXM2Q8N436 756 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 GOLGA5Q8TBA6 731 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 WFDC5Q8TCV5 224 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 RHBDD1Q8TEB9 315 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 CYB5D2Q8WUJ1 264 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 SEMA4DQ92854 862 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 DCBLD2Q96PD2 775 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 NUP58Q9BVL2 599 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 NT5C1AQ9BXI3 368 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 CIPCQ9C0C6 399 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 MTG2Q9H4K7 406 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 EBF2Q9HAK2 575 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 MAGEF1Q9HAY2 307 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 TM9SF3Q9HD45 589 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 USP25Q9UHP3 1055 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 SERTAD1Q9UHV2 236 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 ANKRD6Q9Y2G4 727 aa9.62□□□□□ -0.87
CHMP4A-205ENST00000531158 CAPN8A6NHC0 703 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 CBX4O00257 560 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 PDXKO00764 312 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 SYNCRIPO60506 623 aaKnown RBP9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 TSPAN3O60637 253 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 NTRK1P04629 796 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 IGHV4-34P06331 123 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 P4HA1P13674 534 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 CHKAP35790 457 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 CTSKP43235 329 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 AFF3P51826 1226 aaKnown RBP9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 MCCD1P59942 119 aaPredicted RBP9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 YWHAGP61981 247 aaKnown RBP eCLIP9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 RPS14P62263 151 aaKnown RBP9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 COG7P83436 770 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 IL9RQ01113 521 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 SHBQ15464 509 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 TRIP4Q15650 581 aaPredicted RBP9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 ZNF394Q53GI3 561 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 IL27RAQ6UWB1 636 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 SERPINA13PQ6UXR4 307 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 KIAA0907Q7Z7F0 614 aaPredicted RBP9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 PIGZQ86VD9 579 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 SCUBE3Q8IX30 993 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 SLC4A11Q8NBS3 891 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 OR2T3Q8NH03 318 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 SNX19Q92543 992 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 PAGE5Q96GU1 130 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 MYO19Q96H55 970 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 ZNF396Q96N95 335 aaPredicted RBP9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 NAP1L5Q96NT1 182 aaPredicted RBP9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 NIF3L1Q9GZT8 377 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 PCED1AQ9H1Q7 454 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 OSGEPQ9NPF4 335 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 PRSS16Q9NQE7 514 aa9.61□□□□□ -0.87
CHMP4A-205ENST00000531158 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 217 ms