RNA–Protein interactions for RNA: ENST00000530786.5

BDNF-214, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,176 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-214ENST00000530786 HDAC4P56524 1084 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 UAP1Q16222 522 aaPredicted RBP7.64□□□□□ -1.19
BDNF-214ENST00000530786 HFE2Q6ZVN8 426 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 CDKL2Q92772 493 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 TMA16Q96EY4 203 aaKnown RBP7.64□□□□□ -1.19
BDNF-214ENST00000530786 TSNARE1Q96NA8 513 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 PCDH9Q9HC56 1237 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 RSPH14Q9UHP6 348 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 DMGDHQ9UI17 866 aaKnown RBP7.64□□□□□ -1.19
BDNF-214ENST00000530786 DNPEPQ9ULA0 475 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 H0YHG0 523 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 CCL16O15467 120 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 RAMP2O60895 175 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 APRTP07741 180 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 RHOCP08134 193 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 CA4P22748 312 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 OR1E1P30953 314 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 L1CAMP32004 1257 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 FDFT1P37268 417 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 OXCT1P55809 520 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 MMRN1Q13201 1228 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 C6orf118Q5T5N4 469 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 SH3PXD2AQ5TCZ1 1133 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 LRRC49Q8IUZ0 686 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 CTAGE3PQ8IX95 158 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 GPR65Q8IYL9 337 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 TTC25Q96NG3 672 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 ZYG11BQ9C0D3 744 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 IQCGQ9H095 443 aaKnown RBP7.64□□□□□ -1.19
BDNF-214ENST00000530786 PRM3Q9NNZ6 103 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 BFARQ9NZS9 450 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 FNIP2Q9P278 1114 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 PCYOX1Q9UHG3 505 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 IPO11Q9UI26 975 aaKnown RBP7.64□□□□□ -1.19
BDNF-214ENST00000530786 ZMYM5Q9UJ78 669 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 TLR6Q9Y2C9 796 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 ZNF510Q9Y2H8 683 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 RAD54BQ9Y620 910 aa7.64□□□□□ -1.19
BDNF-214ENST00000530786 SLC9A3R1O14745 358 aaPredicted RBP7.63□□□□□ -1.19
BDNF-214ENST00000530786 EIF3BP55884 814 aaKnown RBP7.63□□□□□ -1.19
BDNF-214ENST00000530786 RAD51Q06609 339 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 DPYSL3Q14195 570 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 DPYSL2Q16555 572 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 RAP1GAP2Q684P5 730 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 PM20D1Q6GTS8 502 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 PAQR9Q6ZVX9 377 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 BEND5Q7L4P6 421 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 TAS1R1Q7RTX1 841 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 ZNF557Q8N988 423 aaPredicted RBP7.63□□□□□ -1.19
BDNF-214ENST00000530786 SMG7Q92540 1137 aaKnown RBP7.63□□□□□ -1.19
BDNF-214ENST00000530786 CSPG4P5Q96PW8 444 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 SLC2A13Q96QE2 648 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 SMOC2Q9H3U7 446 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 CWH43Q9H720 699 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 SAYSD1Q9NPB0 183 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 WHRNQ9P202 907 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 HSFX1Q9UBD0 423 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 FZD10Q9ULW2 581 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 LZTS1Q9Y250 596 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 C3orf70A6NLC5 250 aaPredicted RBP7.63□□□□□ -1.19
BDNF-214ENST00000530786 ZBTB24O43167 697 aaPredicted RBP7.63□□□□□ -1.19
BDNF-214ENST00000530786 LIASO43766 372 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 CA3P07451 260 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 UTRNP46939 3433 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 CARSP49589 748 aaKnown RBP7.63□□□□□ -1.19
BDNF-214ENST00000530786 CASP8Q14790 479 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 HIF1AQ16665 826 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 PPP1R15BQ5SWA1 713 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 CEP85LQ5SZL2 805 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 KIAA0319Q5VV43 1072 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 ALS2CLQ60I27 953 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 CAPN12Q6ZSI9 719 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 TFAP2DQ7Z6R9 452 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 DENND1CQ8IV53 801 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 PPIL6Q8IXY8 311 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 SCML4Q8N228 414 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 CCDC185Q8N715 623 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 MAB21L3Q8N8X9 362 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 CD101Q93033 1021 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 PIWIL1Q96J94 861 aaKnown RBP7.63□□□□□ -1.19
BDNF-214ENST00000530786 HAPLN3Q96S86 360 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 VAT1Q99536 393 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 PIGVQ9NUD9 493 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 KCNU1A8MYU2 1149 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 GOLGA8MH3BSY2 632 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 SEC31AO94979 1220 aaKnown RBP7.63□□□□□ -1.19
BDNF-214ENST00000530786 CNPP09543 421 aaKnown RBP7.63□□□□□ -1.19
BDNF-214ENST00000530786 NFKBIAP25963 317 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 IL1R2P27930 398 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 EPHB1P54762 984 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 SLC25A11Q02978 314 aaKnown RBP7.63□□□□□ -1.19
BDNF-214ENST00000530786 NR1H3Q13133 447 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 NNTQ13423 1086 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 GPR158Q5T848 1215 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 GPRIN1Q7Z2K8 1008 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 CPNE8Q86YQ8 564 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 TCEAL8Q8IYN2 117 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 NDUFAF2Q8N183 169 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 MICALL1Q8N3F8 863 aa7.63□□□□□ -1.19
BDNF-214ENST00000530786 ZMIZ2Q8NF64 920 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms