RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 HABP4Q5JVS0 413 aaKnown RBP8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 FAM72AQ5TYM5 149 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 RAP1GAP2Q684P5 730 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 FAM72DQ6L9T8 149 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 RWDD4Q6NW29 188 aaKnown RBP8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 RFX8Q6ZV50 586 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 GET4Q7L5D6 327 aaPredicted RBP8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ANKS1BQ7Z6G8 1248 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CHSY1Q86X52 802 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 FAM72BQ86X60 149 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 DDX42Q86XP3 938 aaKnown RBP eCLIP8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 RASGEF1CQ8N431 466 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 DEFB123Q8N688 67 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CEP112Q8N8E3 955 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 MNS1Q8NEH6 495 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ZSCAN18Q8TBC5 510 aaPredicted RBP8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ACTRT1Q8TDG2 376 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 SH3RF2Q8TEC5 729 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 MAIP1Q8WWC4 291 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 USP13Q92995 863 aaPredicted RBP8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 WBP2Q969T9 261 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 C1orf74Q96LT6 269 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 RNF157Q96PX1 679 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 DDX50Q9BQ39 737 aaKnown RBP8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 S1PR5Q9H228 398 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 TDP1Q9NUW8 608 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 MTMR10Q9NXD2 777 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CWC15Q9P013 229 aaKnown RBP8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 XPO7Q9UIA9 1087 aaKnown RBP8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 AGO1Q9UL18 857 aaKnown RBP8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ARHGAP26Q9UNA1 814 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 MRFAP1Q9Y605 127 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 HS3ST4Q9Y661 456 aa8.8□□□□□ -1
NEDD8-MDP1-201ENST00000530579 hCG_1818297A0A087WSY0 165 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 TCRBV7S2A1N4TA0A589 114 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 E9PAM4 449 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 H3BQ06 376 aaPredicted RBP8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 PDE2AO00408 941 aaPredicted RBP8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 APOL1O14791 398 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 TSPAN3O60637 253 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CST8O60676 142 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 KLKB1P03952 638 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ZFXP17010 805 aaPredicted RBP8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 TACR2P21452 398 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 AMPD1P23109 780 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 IL4RP24394 825 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 EPHB2P29323 1055 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 GBP2P32456 591 aaPredicted RBP8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 PTPN7P35236 360 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 LTBRP36941 435 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 HCAR3P49019 387 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ZNF135P52742 658 aaPredicted RBP8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 AUHQ13825 339 aaKnown RBP8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 PPP2R5EQ16537 467 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 MS4A13Q5J8X5 152 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ACBD5Q5T8D3 534 aaPredicted RBP8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 PIK3R6Q5UE93 754 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 GPR153Q6NV75 609 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 C1orf228Q6PIY5 440 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 HTR3DQ70Z44 454 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 C14orf80Q86SX3 495 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ARID3BQ8IVW6 561 aaPredicted RBP8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 NPAS3Q8IXF0 933 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 LGI2Q8N0V4 545 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 PCDH19Q8TAB3 1148 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 FAM71BQ8TC56 605 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 TSC1Q92574 1164 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 FGF13Q92913 245 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 AZIN2Q96A70 460 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 TBC1D31Q96DN5 1066 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ZFRQ96KR1 1074 aaKnown RBP8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CSPG4P5Q96PW8 444 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ZNF670Q9BS34 389 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CARD6Q9BX69 1037 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 AP1M1Q9BXS5 423 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 GDE1Q9NZC3 331 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 RCOR3Q9P2K3 495 aaPredicted RBP8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CD207Q9UJ71 328 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 VANGL2Q9ULK5 521 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 TTC7AQ9ULT0 858 aaPredicted RBP8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CCL26Q9Y258 94 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ZNF510Q9Y2H8 683 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 PLXNA3P51805 1871 aa8.79□□□□□ -1
NEDD8-MDP1-201ENST00000530579 GOLGA6L10A0A0M3HER8 536 aa8.78□□□□□ -1
NEDD8-MDP1-201ENST00000530579 E2F8A0AVK6 867 aa8.78□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CTAGE15A4D2H0 777 aa8.78□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ZNF487B1APH4 448 aa8.78□□□□□ -1
NEDD8-MDP1-201ENST00000530579 F5H5T6 163 aa8.78□□□□□ -1
NEDD8-MDP1-201ENST00000530579 TRDMT1O14717 391 aaKnown RBP8.78□□□□□ -1
NEDD8-MDP1-201ENST00000530579 LRIG2O94898 1065 aa8.78□□□□□ -1
NEDD8-MDP1-201ENST00000530579 LATS1O95835 1130 aa8.78□□□□□ -1
NEDD8-MDP1-201ENST00000530579 CTAGE8P0CG41 777 aa8.78□□□□□ -1
NEDD8-MDP1-201ENST00000530579 KCNA5P22460 613 aa8.78□□□□□ -1
NEDD8-MDP1-201ENST00000530579 HTR7P34969 479 aa8.78□□□□□ -1
NEDD8-MDP1-201ENST00000530579 VIPR2P41587 438 aa8.78□□□□□ -1
NEDD8-MDP1-201ENST00000530579 ZXDBP98169 803 aa8.78□□□□□ -1
NEDD8-MDP1-201ENST00000530579 COL19A1Q14993 1142 aa8.78□□□□□ -1
NEDD8-MDP1-201ENST00000530579 TAZQ16635 292 aa8.78□□□□□ -1
NEDD8-MDP1-201ENST00000530579 FAM78AQ5JUQ0 283 aa8.78□□□□□ -1
NEDD8-MDP1-201ENST00000530579 RABGAP1LQ5R372 815 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms