RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 ARHGAP18Q8N392 663 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 CPXM2Q8N436 756 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 C12orf29Q8N999 325 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 TAF4BQ92750 862 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 BIRC7Q96CA5 298 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 CYFIP2Q96F07 1278 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 PIWIL1Q96J94 861 aaKnown RBP9.42□□□□□ -0.9
VPS11-203ENST00000529545 FCRL3Q96P31 734 aaPredicted RBP9.42□□□□□ -0.9
VPS11-203ENST00000529545 IMPG2Q9BZV3 1241 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 PRORYQ9H606 182 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 SGK2Q9HBY8 427 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 KBTBD4Q9NVX7 518 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 AGO1Q9UL18 857 aaKnown RBP9.42□□□□□ -0.9
VPS11-203ENST00000529545 NCKAP1Q9Y2A7 1128 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 ASH1LQ9NR48 2969 aaKnown RBP9.42□□□□□ -0.9
VPS11-203ENST00000529545 CABIN1Q9Y6J0 2220 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 LOC400499M0QZD8 3231 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 TEX51A0A1B0GUA7 166 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 ENC1O14682 589 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 PAPSS1O43252 624 aaPredicted RBP9.41□□□□□ -0.9
VPS11-203ENST00000529545 TSPAN3O60637 253 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 RFPL3O75679 317 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 C4BPAP04003 597 aaKnown RBP9.41□□□□□ -0.9
VPS11-203ENST00000529545 ITGAVP06756 1048 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 PLA2G2AP14555 144 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 CTSKP43235 329 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 KIF11P52732 1056 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 RACK1P63244 317 aaKnown RBP9.41□□□□□ -0.9
VPS11-203ENST00000529545 PDE4CQ08493 712 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 KNOP1Q1ED39 458 aaKnown RBP9.41□□□□□ -0.9
VPS11-203ENST00000529545 MPPE1Q53F39 396 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 CCDC186Q7Z3E2 898 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 GPR155Q7Z3F1 870 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 IQUBQ8NA54 791 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 GANCQ8TET4 914 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 WFIKKN2Q8TEU8 576 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 PARD3BQ8TEW8 1205 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 SORCS1Q8WY21 1168 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 GOLGA1Q92805 767 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 CNDP2Q96KP4 475 aaKnown RBP9.41□□□□□ -0.9
VPS11-203ENST00000529545 NT5C1AQ9BXI3 368 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 NRSN2Q9GZP1 204 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 GZF1Q9H116 711 aaPredicted RBP9.41□□□□□ -0.9
VPS11-203ENST00000529545 MARCH2Q9P0N8 246 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 HMGXB4Q9UGU5 601 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 MORC2Q9Y6X9 1032 aaPredicted RBP9.41□□□□□ -0.9
VPS11-203ENST00000529545 LAMA5O15230 3695 aa9.41□□□□□ -0.9
VPS11-203ENST00000529545 KNL1Q8NG31 2342 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 A0A1B0GTQ1 180 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 SLC12A8A0AV02 714 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 LRRIQ3A6PVS8 624 aaPredicted RBP9.4□□□□□ -0.9
VPS11-203ENST00000529545 HHLA1C9JL84 531 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 VILLO15195 856 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 YKT6O15498 198 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 C1QL1O75973 258 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 VNN1O95497 513 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 ATP5BP06576 529 aaKnown RBP9.4□□□□□ -0.9
VPS11-203ENST00000529545 PIK3CAP42336 1068 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 HARS2P49590 506 aaKnown RBP9.4□□□□□ -0.9
VPS11-203ENST00000529545 SLC8A3P57103 927 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 ZNF445P59923 1031 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 RPS14P62263 151 aaKnown RBP9.4□□□□□ -0.9
VPS11-203ENST00000529545 CLDN10P78369 228 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 TARDBPQ13148 414 aaKnown RBP eCLIP9.4□□□□□ -0.9
VPS11-203ENST00000529545 STK38Q15208 465 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 ZNF776Q68DI1 518 aaPredicted RBP9.4□□□□□ -0.9
VPS11-203ENST00000529545 KIAA0895LQ68EN5 471 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 FAM173BQ6P4H8 233 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 CNNM4Q6P4Q7 775 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 LAYNQ6UX15 382 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 UNC13DQ70J99 1090 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 CHST9Q7L1S5 443 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 SCD5Q86SK9 330 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 GATAD2AQ86YP4 633 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 CCDC150Q8NCX0 1101 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 FGF11Q92914 225 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 ELMO3Q96BJ8 720 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 PLD4Q96BZ4 506 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 DHX58Q96C10 678 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 DUSP16Q9BY84 665 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 UPF2Q9HAU5 1272 aaKnown RBP9.4□□□□□ -0.9
VPS11-203ENST00000529545 CYP3A43Q9HB55 503 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 SLC39A2Q9NP94 309 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 SUN2Q9UH99 717 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 SCML1Q9UN30 329 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 RAI2Q9Y5P3 530 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 SLCO1B1Q9Y6L6 691 aa9.4□□□□□ -0.9
VPS11-203ENST00000529545 COL5A1P20908 1838 aaPredicted RBP9.4□□□□□ -0.91
VPS11-203ENST00000529545 MUC22E2RYF6 1773 aaPredicted RBP9.4□□□□□ -0.91
VPS11-203ENST00000529545 KNTC1P50748 2209 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 FAM47DPA6NHR8 397 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 LRRC72A6NJI9 287 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 J3QKU1 62 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 TLX3O43711 291 aaPredicted RBP9.39□□□□□ -0.91
VPS11-203ENST00000529545 RNASEH1O60930 286 aaKnown RBP9.39□□□□□ -0.91
VPS11-203ENST00000529545 CD2BP2O95400 341 aaKnown RBP9.39□□□□□ -0.91
VPS11-203ENST00000529545 ASS1P00966 412 aaKnown RBP9.39□□□□□ -0.91
VPS11-203ENST00000529545 POLR2EP19388 210 aaKnown RBP9.39□□□□□ -0.91
VPS11-203ENST00000529545 ACTN2P35609 894 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 ARRB1P49407 418 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms