RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	RMDN1	Q96DB5	314 aa		12.21	□□□□□ -0.45
PSMC3-205	ENST00000528362	IRX2	Q9BZI1	471 aa	Predicted RBP	12.21	□□□□□ -0.45
PSMC3-205	ENST00000528362	CIPC	Q9C0C6	399 aa		12.21	□□□□□ -0.45
PSMC3-205	ENST00000528362	SYNC	Q9H7C4	482 aa		12.21	□□□□□ -0.45
PSMC3-205	ENST00000528362	SEMA4G	Q9NTN9	838 aa		12.21	□□□□□ -0.45
PSMC3-205	ENST00000528362	ABCB8	Q9NUT2	735 aa		12.21	□□□□□ -0.45
PSMC3-205	ENST00000528362	ELOVL2	Q9NXB9	296 aa		12.21	□□□□□ -0.45
PSMC3-205	ENST00000528362	THAP10	Q9P2Z0	257 aa	Predicted RBP	12.21	□□□□□ -0.45
PSMC3-205	ENST00000528362	NOCT	Q9UK39	431 aa	Known RBP	12.21	□□□□□ -0.45
PSMC3-205	ENST00000528362	STON1	Q9Y6Q2	735 aa		12.21	□□□□□ -0.45
PSMC3-205	ENST00000528362	CACNA1A	O00555	2505 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	DAB1	O75553	588 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	GFPT2	O94808	682 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	LSM8	O95777	96 aa	Known RBP	12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	APOE	P02649	317 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	MME	P08473	750 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	PABPC1	P11940	636 aa	Known RBP	12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	NDUFV2	P19404	249 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	GBP1	P32455	592 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	IL12RB1	P42701	662 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	GABRB2	P47870	512 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	SNX16	P57768	344 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	RPS24	P62847	133 aa	Known RBP	12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	NOMO3	P69849	1222 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	CDK17	Q00537	523 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	SLC6A3	Q01959	620 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	LMNB2	Q03252	620 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	ZNF234	Q14588	700 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	ELF2	Q15723	593 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	CCDC6	Q16204	474 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	CSRP2	Q16527	193 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	MAP7D1	Q3KQU3	841 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	MS4A13	Q5J8X5	152 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	OTUD1	Q5VV17	481 aa	Predicted RBP	12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	SDE2	Q6IQ49	451 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	ADIPOR2	Q86V24	386 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	C11orf74	Q86VG3	221 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	FRMD1	Q8N878	549 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	HJURP	Q8NCD3	748 aa	Predicted RBP	12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	ZNF397	Q8NF99	534 aa	Predicted RBP	12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	SLC20A1	Q8WUM9	679 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	LMLN	Q96KR4	655 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	DDX50	Q9BQ39	737 aa	Known RBP	12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	SLC6A17	Q9H1V8	727 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	ARRDC1-AS1	Q9H2J1	176 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	PDCL3	Q9H2J4	239 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	FAM204A	Q9H8W3	233 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	NLRC4	Q9NPP4	1024 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	DDIT4	Q9NX09	232 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	CALCOCO1	Q9P1Z2	691 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	MBD1	Q9UIS9	605 aa	Predicted RBP	12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	GGA2	Q9UJY4	613 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	PCDHGA5	Q9Y5G8	931 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	KIAA1549L	Q6ZVL6	1849 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	CEP250	Q9BV73	2442 aa		12.2	□□□□□ -0.46
PSMC3-205	ENST00000528362	KCNU1	A8MYU2	1149 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	NPC1	O15118	1278 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	RHOBTB1	O94844	696 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	CDK11B	P21127	795 aa	Known RBP	12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	PRKCH	P24723	683 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	CD70	P32970	193 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	SOX5	P35711	763 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	MPL	P40238	635 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	ID4	P47928	161 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	UBXN1	Q04323	297 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	FUT11	Q495W5	492 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	C2CD6	Q53TS8	623 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	PLA2G2C	Q5R387	149 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	NAA35	Q5VZE5	725 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	RAP1GAP2	Q684P5	730 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	PRR23C	Q6ZRP0	262 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	XYLT1	Q86Y38	959 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	ZDHHC17	Q8IUH5	632 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	DHX40	Q8IX18	779 aa	Known RBP	12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	AHI1	Q8N157	1196 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	PGBD3	Q8N328	593 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	WFIKKN2	Q8TEU8	576 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	UCMA	Q8WVF2	138 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	CPA5	Q8WXQ8	436 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	BTN2A3P	Q96KV6	586 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	SPACA7	Q96KW9	195 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	ERGIC2	Q96RQ1	377 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	BPIFA3	Q9BQP9	254 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	FUCA2	Q9BTY2	467 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	ADAM33	Q9BZ11	813 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	NAT10	Q9H0A0	1025 aa	Known RBP	12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	STIM2	Q9P246	746 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	DAAM1	Q9Y4D1	1078 aa		12.19	□□□□□ -0.46
PSMC3-205	ENST00000528362	ATG2B	Q96BY7	2078 aa		12.18	□□□□□ -0.46
PSMC3-205	ENST00000528362	MYOF	Q9NZM1	2061 aa		12.18	□□□□□ -0.46
PSMC3-205	ENST00000528362	SYNJ2BP-COX16	A0A087WUM0	186 aa		12.18	□□□□□ -0.46
PSMC3-205	ENST00000528362	BCLAF3	A2AJT9	711 aa	Known RBP	12.18	□□□□□ -0.46
PSMC3-205	ENST00000528362	TIMM44	O43615	452 aa		12.18	□□□□□ -0.46
PSMC3-205	ENST00000528362	CHRNB2	P17787	502 aa		12.18	□□□□□ -0.46
PSMC3-205	ENST00000528362	TFE3	P19532	575 aa	Predicted RBP	12.18	□□□□□ -0.46
PSMC3-205	ENST00000528362	TACR2	P21452	398 aa		12.18	□□□□□ -0.46
PSMC3-205	ENST00000528362	CCR1	P32246	355 aa		12.18	□□□□□ -0.46
PSMC3-205	ENST00000528362	SCNN1A	P37088	669 aa		12.18	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms