RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 CPQQ9Y646 472 aa12.05□□□□□ -0.48
CCDC90B-210ENST00000528149 ADAMTS20P59510 1910 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 K7ESF4 209 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 LEFTY2O00292 366 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 MSI1O43347 362 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 HSF2BPO75031 334 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 OLFM2O95897 454 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 FYNP06241 537 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 PTMAP06454 111 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 MBL2P11226 248 aaPredicted RBP12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 NCAM1P13591 858 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 PSMC3P17980 439 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 DDX6P26196 483 aaKnown RBP eCLIP12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 CNR2P34972 360 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 CYLC1P35663 651 aaPredicted RBP12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 PSEN1P49768 467 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 TUBP50607 506 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 GSCP56915 257 aaPredicted RBP12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 RNASE9P60153 205 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 PITX1P78337 314 aaPredicted RBP12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 FCHO2Q0JRZ9 810 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 EFEMP1Q12805 493 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 ZNF268Q14587 947 aaPredicted RBP12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 EFHC1Q5JVL4 640 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 TRNP1Q6NT89 227 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 PPP1R2P3Q6NXS1 205 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 LONP2Q86WA8 852 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 ZDHHC17Q8IUH5 632 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 EMC1Q8N766 993 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 C3orf20Q8ND61 904 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 ACRBPQ8NEB7 543 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 BPIFB1Q8TDL5 484 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 DNASE1L2Q92874 299 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 ARHGEF26Q96DR7 871 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 MCEEQ96PE7 176 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 SCNM1Q9BWG6 230 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 NACA2Q9H009 215 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 THAP2Q9H0W7 228 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 EBF3Q9H4W6 596 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 BRD9Q9H8M2 597 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 LMAN1LQ9HAT1 526 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 FBRSL1Q9HCM7 1045 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 RBM12Q9NTZ6 932 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 TDP1Q9NUW8 608 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 ASNSD1Q9NWL6 643 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 CLIC5Q9NZA1 410 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 MYO1AQ9UBC5 1043 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 CNOT8Q9UFF9 292 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 RASAL2Q9UJF2 1139 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 NAALADL1Q9UQQ1 740 aa12.04□□□□□ -0.48
CCDC90B-210ENST00000528149 TCRBV5S1A1TA0A578 114 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 MAN2B1O00754 1011 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 CAPN9O14815 690 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 NDUFA10O95299 355 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 HDCP19113 662 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 FLT3P36888 993 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 SCNN1AP37088 669 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 AVPR1AP37288 418 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 GALCP54803 685 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 YWHAZP63104 245 aaKnown RBP12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 CCZ1BP86790 482 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 CCZ1P86791 482 aaPredicted RBP12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 GAB4Q2WGN9 574 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 DCAF6Q58WW2 860 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 SYPL2Q5VXT5 272 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 MSANTD2Q6P1R3 559 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 MIB1Q86YT6 1006 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 LRRC8AQ8IWT6 810 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 CCDC170Q8IYT3 715 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 DEFB106AQ8N104 65 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 JOSD2Q8TAC2 188 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 ADAM32Q8TC27 787 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 DQX1Q8TE96 717 aaKnown RBP12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 RNF139Q8WU17 664 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 EZH1Q92800 747 aaPredicted RBP12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 TRIM11Q96F44 468 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 SLC2A13Q96QE2 648 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 DESI2Q9BSY9 194 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 SELENOOQ9BVL4 669 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 POPDC2Q9HBU9 364 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 ABCC13Q9NSE7 274 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 MARCH2Q9P0N8 246 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 CFAP97Q9P2B7 532 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 WDR35Q9P2L0 1181 aa12.03□□□□□ -0.48
CCDC90B-210ENST00000528149 DOCK4Q8N1I0 1966 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 SYNJ2BP-COX16A0A087WUM0 186 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 EPN2O95208 641 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 GLI1P08151 1106 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 HMBSP08397 361 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 H2AFZP0C0S5 128 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 MYBL1P10243 752 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 CHRNB1P11230 501 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 TFE3P19532 575 aaPredicted RBP12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 RPL7AP62424 266 aaKnown RBP12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 CCDC173Q0VFZ6 552 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 OTUD1Q5VV17 481 aaPredicted RBP12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 RNF43Q68DV7 783 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 TCEAL6Q6IPX3 200 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 PLEKHA7Q6IQ23 1121 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 PKN3Q6P5Z2 889 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms