RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 KLHL4Q9C0H6 718 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 IFT122Q9HBG6 1241 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-208ENST00000527323 GABRQQ9UN88 632 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-208ENST00000527323 ELNP15502 786 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 CPOXP36551 454 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 GRIA1P42261 906 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 TCHHL1Q5QJ38 904 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-208ENST00000527323 RABGAP1LQ5R372 815 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 IFNL1Q8IU54 200 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 UNC5BQ8IZJ1 945 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 RAB3IL1Q8TBN0 382 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 TMEM176AQ96HP8 235 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 PARK7Q99497 189 aaKnown RBP12.88□□□□□ -0.35
CAPN1-208ENST00000527323 NIFKQ9BYG3 293 aaKnown RBP12.88□□□□□ -0.35
CAPN1-208ENST00000527323 PLAC1Q9HBJ0 212 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 PNPOQ9NVS9 261 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 SORCS3Q9UPU3 1222 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 HMX2A2RU54 273 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 TNPO2O14787 897 aaKnown RBP12.87□□□□□ -0.35
CAPN1-208ENST00000527323 BUD23O43709 281 aaKnown RBP12.87□□□□□ -0.35
CAPN1-208ENST00000527323 METTL18O95568 372 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 SLC25A27O95847 323 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 ATP5BP06576 529 aaKnown RBP12.87□□□□□ -0.35
CAPN1-208ENST00000527323 PEX6Q13608 980 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 PDSS2Q86YH6 399 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 DEFB107AQ8IZN7 70 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 NLRP4Q96MN2 994 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 ELOVL4Q9GZR5 314 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 RPF1Q9H9Y2 349 aaKnown RBP12.87□□□□□ -0.35
CAPN1-208ENST00000527323 IL1RAPL1Q9NZN1 696 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 E2F8A0AVK6 867 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 FAM189A1O60320 539 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 SIN3BO75182 1162 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 ZMPSTE24O75844 475 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 CXCL8P10145 99 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 AQP4P55087 323 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 LAMTOR4Q0VGL1 99 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 ACAD11Q709F0 780 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 LRRC39Q96DD0 335 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 SIGLEC10Q96LC7 697 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 PIH1D1Q9NWS0 290 aaKnown RBP12.87□□□□□ -0.35
CAPN1-208ENST00000527323 SLC17A6Q9P2U8 582 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 ADAMTS6Q9UKP5 1117 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 DNAJC25-GNG10A0A024R161 153 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 UNCXA6NJT0 531 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 ITGB3P05106 788 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 UQCRBP14927 111 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 VCLP18206 1134 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 PEX2P28328 305 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 GPD2P43304 727 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 CCNA1P78396 465 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 CRADDP78560 199 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 CDK18Q07002 472 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 PDK2Q15119 407 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 PDCD2Q16342 344 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-208ENST00000527323 BOLA3Q53S33 107 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 TEDDM1Q5T9Z0 273 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 VWA5B1Q5TIE3 1220 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 ARHGAP22Q7Z5H3 698 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 PLEKHH3Q7Z736 793 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 DNERQ8NFT8 737 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 PCDH19Q8TAB3 1148 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 PIWIL1Q96J94 861 aaKnown RBP12.87□□□□□ -0.35
CAPN1-208ENST00000527323 NDNQ99608 321 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 EPAS1Q99814 870 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 MROH8Q9H579 483 aa12.87□□□□□ -0.35
CAPN1-208ENST00000527323 FAM159BA6NKW6 160 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 C2CD4BA6NLJ0 364 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 STK10O94804 968 aaKnown RBP12.86□□□□□ -0.35
CAPN1-208ENST00000527323 ENDOD1O94919 500 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 SMPD1P17405 629 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 ATF7IP2Q5U623 682 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 FAM183BPQ6ZVS7 135 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 HPS6Q86YV9 775 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 NME8Q8N427 588 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 PQLC3Q8N755 202 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 MAML3Q96JK9 1138 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 FAM49AQ9H0Q0 323 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-208ENST00000527323 MKS1Q9NXB0 559 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 WDR27A2RRH5 827 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 FAM155AB1AL88 458 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-208ENST00000527323 B4GALT5O43286 388 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 RAG1P15918 1043 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 TGM2P21980 687 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 GABRB2P47870 512 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 DLG1Q12959 904 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 CA9Q16790 459 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 LRRC23Q53EV4 343 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-208ENST00000527323 FAM160B1Q5W0V3 765 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 EEF1DP3Q658K8 133 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 PDPK2PQ6A1A2 396 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 TRNP1Q6NT89 227 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 ISLR2Q6UXK2 745 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 TMEM192Q8IY95 271 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 HS6ST3Q8IZP7 471 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 B4GALNT2Q8NHY0 566 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 CMTM5Q96DZ9 223 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 CCDC28BQ9BUN5 200 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms