RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 ZNF180Q9UJW8 692 aa3.19□□□□□ -1.9
ECHDC1-219ENST00000526299 COL4A3BPQ9Y5P4 624 aa3.19□□□□□ -1.9
ECHDC1-219ENST00000526299 SPATA31A5Q5VU36 1347 aa3.19□□□□□ -1.9
ECHDC1-219ENST00000526299 EMSYQ7Z589 1322 aa3.19□□□□□ -1.9
ECHDC1-219ENST00000526299 SPATA31A7Q8IWB4 1347 aa3.19□□□□□ -1.9
ECHDC1-219ENST00000526299 A0A1B0GUV1 79 aa3.18□□□□□ -1.9
ECHDC1-219ENST00000526299 OR6C75A6NL08 312 aa3.18□□□□□ -1.9
ECHDC1-219ENST00000526299 NDUFS1P28331 727 aa3.18□□□□□ -1.9
ECHDC1-219ENST00000526299 IGHMBP2P38935 993 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-219ENST00000526299 AGTR2P50052 363 aa3.18□□□□□ -1.9
ECHDC1-219ENST00000526299 ROR2Q01974 943 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-219ENST00000526299 CRYZQ08257 329 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-219ENST00000526299 ELF2Q15723 593 aa3.18□□□□□ -1.9
ECHDC1-219ENST00000526299 FAM76BQ5HYJ3 339 aa3.18□□□□□ -1.9
ECHDC1-219ENST00000526299 Q6ZTK2 550 aa3.18□□□□□ -1.9
ECHDC1-219ENST00000526299 PRR26Q8N8Z3 221 aa3.18□□□□□ -1.9
ECHDC1-219ENST00000526299 C7orf57Q8NEG2 295 aa3.18□□□□□ -1.9
ECHDC1-219ENST00000526299 MBD3L2Q8NHZ7 208 aaPredicted RBP3.18□□□□□ -1.9
ECHDC1-219ENST00000526299 IPCEF1Q8WWN9 437 aaPredicted RBP3.18□□□□□ -1.9
ECHDC1-219ENST00000526299 ZNF845Q96IR2 970 aaPredicted RBP3.18□□□□□ -1.9
ECHDC1-219ENST00000526299 FAM227BQ96M60 508 aa3.18□□□□□ -1.9
ECHDC1-219ENST00000526299 SELENOOQ9BVL4 669 aa3.18□□□□□ -1.9
ECHDC1-219ENST00000526299 RNF26Q9BY78 433 aaPredicted RBP3.18□□□□□ -1.9
ECHDC1-219ENST00000526299 TASP1Q9H6P5 420 aa3.18□□□□□ -1.9
ECHDC1-219ENST00000526299 OGDHLQ9ULD0 1010 aa3.18□□□□□ -1.9
ECHDC1-219ENST00000526299 CAPN11Q9UMQ6 739 aa3.18□□□□□ -1.9
ECHDC1-219ENST00000526299 DOCK7Q96N67 2140 aa3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 A0A1B0GVT2 93 aa3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 BECN2A8MW95 431 aa3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 INAFM1C9JVW0 142 aa3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 RHODO00212 210 aa3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 PRPF3O43395 683 aaKnown RBP3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 CYP1A2P05177 515 aa3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 DRD1P21728 446 aa3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 STAT6P42226 847 aa3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 CARSP49589 748 aaKnown RBP3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 ART1P52961 327 aa3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 GLE1Q53GS7 698 aaKnown RBP3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 ASPHD1Q5U4P2 390 aa3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 PARM1Q6UWI2 310 aa3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 DDIASQ8IXT1 998 aa3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 URB1-AS1Q96HZ7 61 aa3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 DCLK3Q9C098 648 aa3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 SLC25A32Q9H2D1 315 aa3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 AS3MTQ9HBK9 375 aa3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 ZNF287Q9HBT7 754 aa3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 ZNF212Q9UDV6 495 aa3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 L1RE1Q9UN81 338 aa3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 PTGDR2Q9Y5Y4 395 aa3.17□□□□□ -1.9
ECHDC1-219ENST00000526299 BTBD18B2RXH4 712 aa3.16□□□□□ -1.9
ECHDC1-219ENST00000526299 WNT1P04628 370 aa3.16□□□□□ -1.9
ECHDC1-219ENST00000526299 PDLIM4P50479 330 aa3.16□□□□□ -1.9
ECHDC1-219ENST00000526299 DDR1Q08345 913 aa3.16□□□□□ -1.9
ECHDC1-219ENST00000526299 SEMA3BQ13214 749 aa3.16□□□□□ -1.9
ECHDC1-219ENST00000526299 MRGPRG-AS1Q2M3A8 158 aa3.16□□□□□ -1.9
ECHDC1-219ENST00000526299 HIST2H2BCQ6DN03 193 aa3.16□□□□□ -1.9
ECHDC1-219ENST00000526299 SPSB3Q6PJ21 355 aa3.16□□□□□ -1.9
ECHDC1-219ENST00000526299 EPM2AIP1Q7L775 607 aaPredicted RBP3.16□□□□□ -1.9
ECHDC1-219ENST00000526299 SESTD1Q86VW0 696 aa3.16□□□□□ -1.9
ECHDC1-219ENST00000526299 GPSM1Q86YR5 675 aa3.16□□□□□ -1.9
ECHDC1-219ENST00000526299 KIAA0319LQ8IZA0 1049 aa3.16□□□□□ -1.9
ECHDC1-219ENST00000526299 FAM47BQ8NA70 645 aa3.16□□□□□ -1.9
ECHDC1-219ENST00000526299 TMEM60Q9H2L4 133 aa3.16□□□□□ -1.9
ECHDC1-219ENST00000526299 PLAC1Q9HBJ0 212 aa3.16□□□□□ -1.9
ECHDC1-219ENST00000526299 CADPSQ9ULU8 1353 aa3.15□□□□□ -1.9
ECHDC1-219ENST00000526299 DENND3A2RUS2 1198 aa3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 SMTNL1A8MU46 457 aa3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 MDM4O15151 490 aa3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 ALDH1L1O75891 902 aa3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 NFATC1O95644 943 aa3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 MT-ND5P03915 603 aa3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 UMODP07911 640 aa3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 MATN1P21941 496 aa3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 MMP8P22894 467 aa3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 HOXD3P31249 432 aaPredicted RBP3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 DMWDQ09019 674 aa3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 SHBQ15464 509 aa3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 Q5PR19 223 aa3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 FAM83HQ6ZRV2 1179 aaPredicted RBP3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 SLC16A12Q6ZSM3 486 aa3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 SDR16C5Q8N3Y7 309 aa3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 ABHD5Q8WTS1 349 aa3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 GPR78Q96P69 363 aa3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 CDCP1Q9H5V8 836 aa3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 PLEKHB1Q9UF11 243 aaPredicted RBP3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 KCNG2Q9UJ96 466 aa3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 G3BP2Q9UN86 482 aaKnown RBP3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 SLC8A2Q9UPR5 921 aa3.15□□□□□ -1.91
ECHDC1-219ENST00000526299 CLEC18AA5D8T8 446 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 FRS3O43559 492 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 RGS14O43566 566 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 SGPL1O95470 568 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 ZBTB11O95625 1053 aaPredicted RBP3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 PPP1R3DO95685 299 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 PRSS2P07478 247 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 ATICP31939 592 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 SLC8A1P32418 973 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 RAB27AP51159 221 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms