RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 PDCL3Q9H2J4 239 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 SYNCQ9H7C4 482 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 VPS45Q9NRW7 570 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.15■□□□□ 0.665e-7■■■■□ 20.5
TSPAN4-216ENST00000526055 CACNA2D2Q9NY47 1150 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 RRN3Q9NYV6 651 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 LIMA1Q9UHB6 759 aaKnown RBP19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 SLC12A6Q9UHW9 1150 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 CLEC4EQ9ULY5 219 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 STON1Q9Y6Q2 735 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 PNMA6AP0CW24 399 aaPredicted RBP19.14■□□□□ 0.65
TSPAN4-216ENST00000526055 HLA-FP30511 346 aa19.14■□□□□ 0.65
TSPAN4-216ENST00000526055 MPLP40238 635 aa19.14■□□□□ 0.65
TSPAN4-216ENST00000526055 DPP6P42658 865 aa19.14■□□□□ 0.65
TSPAN4-216ENST00000526055 WASP42768 502 aa19.14■□□□□ 0.65
TSPAN4-216ENST00000526055 RSPO4Q2I0M5 234 aaPredicted RBP19.14■□□□□ 0.65
TSPAN4-216ENST00000526055 MAP7D1Q3KQU3 841 aa19.14■□□□□ 0.65
TSPAN4-216ENST00000526055 DCAF6Q58WW2 860 aa19.14■□□□□ 0.65
TSPAN4-216ENST00000526055 NADSYN1Q6IA69 706 aa19.14■□□□□ 0.65
TSPAN4-216ENST00000526055 OLFML1Q6UWY5 402 aa19.14■□□□□ 0.65
TSPAN4-216ENST00000526055 SLC36A4Q6YBV0 504 aa19.14■□□□□ 0.65
TSPAN4-216ENST00000526055 LPCAT2Q7L5N7 544 aa19.14■□□□□ 0.65
TSPAN4-216ENST00000526055 ZNF677Q86XU0 584 aa19.14■□□□□ 0.65
TSPAN4-216ENST00000526055 AHI1Q8N157 1196 aa19.14■□□□□ 0.65
TSPAN4-216ENST00000526055 NAT10Q9H0A0 1025 aaKnown RBP19.14■□□□□ 0.65
TSPAN4-216ENST00000526055 GANQ9H2C0 597 aa19.14■□□□□ 0.65
TSPAN4-216ENST00000526055 TJP2Q9UDY2 1190 aa19.14■□□□□ 0.65
TSPAN4-216ENST00000526055 CDV3Q9UKY7 258 aaKnown RBP19.14■□□□□ 0.65
TSPAN4-216ENST00000526055 DNAH14Q0VDD8 3507 aa19.14■□□□□ 0.65
TSPAN4-216ENST00000526055 BCLAF3A2AJT9 711 aaKnown RBP19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 TBL1XO60907 577 aa19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 ZNF18P17022 549 aa19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 SLC6A4P31645 630 aa19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 GABRB2P47870 512 aa19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 SLC6A3Q01959 620 aa19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 ARID5AQ03989 594 aa19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 PTPN20Q4JDL3 420 aa19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 MS4A13Q5J8X5 152 aa19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 OR6B2Q6IFH4 312 aa19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 KIAA1211LQ6NV74 962 aa19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 RFWD3Q6PCD5 774 aa19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 FAM183BPQ6ZVS7 135 aa19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 METTL3Q86U44 580 aaKnown RBP19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 DEFB106AQ8N104 65 aa19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 ATP6V0D2Q8N8Y2 350 aa19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 MSANTD4Q8NCY6 345 aa19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 FIBINQ8TAL6 211 aa19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 ADAM32Q8TC27 787 aa19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 DDX1Q92499 740 aaKnown RBP19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 RTKNQ9BST9 563 aa19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 CIPCQ9C0C6 399 aa19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 CALCOCO1Q9P1Z2 691 aa19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 GGA2Q9UJY4 613 aa19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.13■□□□□ 0.65
TSPAN4-216ENST00000526055 PLXND1Q9Y4D7 1925 aa19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 GOLGA6L7A0A1B0GV03 622 aa19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 LGALS16A8MUM7 142 aa19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 MAP3K13O43283 966 aa19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 DAB1O75553 588 aa19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 ERBB2P04626 1255 aa19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 ATP5BP06576 529 aaKnown RBP19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 PABPC1P11940 636 aaKnown RBP19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 NDUFV2P19404 249 aa19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 BCKDHBP21953 392 aa19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 CCR1P32246 355 aa19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 NOS2P35228 1153 aa19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 IL12RB1P42701 662 aa19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 COPB1P53618 953 aaKnown RBP19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 TYRO3Q06418 890 aa19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 ZNF234Q14588 700 aa19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 TAF5Q15542 800 aa19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 ZC3H12AQ5D1E8 599 aaKnown RBP19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 TMEM215Q68D42 235 aa19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 CCDC117Q8IWD4 279 aaPredicted RBP19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 C12orf50Q8NA57 414 aaPredicted RBP19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 FAM204AQ9H8W3 233 aa19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 ABCB8Q9NUT2 735 aa19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 TMEM63CQ9P1W3 806 aa19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 PLA2G4CQ9UP65 541 aa19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 INVSQ9Y283 1065 aa19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 SIK3Q9Y2K2 1263 aa19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 ABCA7Q8IZY2 2146 aa19.12■□□□□ 0.65
TSPAN4-216ENST00000526055 KCNU1A8MYU2 1149 aa19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 WASH3PC4AMC7 463 aa19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 AP5Z1O43299 807 aa19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 SYNCRIPO60506 623 aaKnown RBP19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 CAVIN2O95810 425 aa19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 CDK11BP21127 795 aaKnown RBP19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 ABCB4P21439 1286 aa19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 SGSHP51688 502 aa19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 LIMK1P53667 647 aa19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 POLR2FP61218 127 aaKnown RBP19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 CREB5Q02930 508 aa19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 NCAPHQ15003 741 aa19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 CHST9Q7L1S5 443 aa19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 ADIPOR2Q86V24 386 aa19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 MFN1Q8IWA4 741 aa19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 EPS8L1Q8TE68 723 aa19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 RLN3Q8WXF3 142 aa19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 C18orf8Q96DM3 657 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms