RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 RNF125Q96EQ8 232 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 HAPLN3Q96S86 360 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 FUZQ9BT04 418 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 CENPOQ9BU64 300 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 ACAD9Q9H845 621 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 PRKRIP1Q9H875 184 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-211ENST00000525970 LIN7CQ9NUP9 197 aaKnown RBP5.07□□□□□ -1.6
CSDE1-211ENST00000525970 TMLHEQ9NVH6 421 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 NSMCE4AQ9NXX6 385 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 HSF4Q9ULV5 492 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 GPR34Q9UPC5 381 aa5.07□□□□□ -1.6
CSDE1-211ENST00000525970 SPTLC2O15270 562 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 PEX1O43933 1283 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 DOK2O60496 412 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 ESRRBO95718 433 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 PRKAR1BP31321 381 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 CXCR5P32302 372 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 NPTX2P47972 431 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 DRG2P55039 364 aaKnown RBP5.06□□□□□ -1.6
CSDE1-211ENST00000525970 NAP1L1P55209 391 aaKnown RBP5.06□□□□□ -1.6
CSDE1-211ENST00000525970 FAM3BP58499 235 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-211ENST00000525970 POU5F1Q01860 360 aaKnown RBP5.06□□□□□ -1.6
CSDE1-211ENST00000525970 GALNT2Q10471 571 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 FOXI1Q12951 378 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 TBRG1Q3YBR2 411 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 TMEM196Q5HYL7 178 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 RBM20Q5T481 1227 aaKnown RBP5.06□□□□□ -1.6
CSDE1-211ENST00000525970 NAA35Q5VZE5 725 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 ICE2Q659A1 982 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 HAUS3Q68CZ6 603 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 Q6ZNX1 250 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 TMTC3Q6ZXV5 915 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 H1FNTQ75WM6 255 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-211ENST00000525970 TOR1AIP2Q8NFQ8 470 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 C17orf80Q9BSJ5 609 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 VN1R3Q9BXE9 311 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 LMAN2LQ9H0V9 348 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 PLEKHA2Q9HB19 425 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 IL21RQ9HBE5 538 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 TRIM36Q9NQ86 728 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 KCTD5Q9NXV2 234 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 LRIT1Q9P2V4 623 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 RCE1Q9Y256 329 aa5.06□□□□□ -1.6
CSDE1-211ENST00000525970 MAST3O60307 1309 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 M0QZQ0 153 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 TCERG1O14776 1098 aaKnown RBP5.05□□□□□ -1.6
CSDE1-211ENST00000525970 YY2O15391 372 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 KLK10O43240 276 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 TRIAP1O43715 76 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 WDR47O94967 919 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 HEXIM1O94992 359 aaKnown RBP5.05□□□□□ -1.6
CSDE1-211ENST00000525970 SGPL1O95470 568 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 F9P00740 461 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 RRM1P23921 792 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 CHMP24386 653 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 CD6P30203 668 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 PLA2G5P39877 138 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 MPLP40238 635 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 PBX1P40424 430 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 POLD2P49005 469 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 CCR9P51686 369 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 SP2Q02086 613 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 PDCLQ13371 301 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 TUBB3Q13509 450 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 KCNJ12Q14500 433 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 CCDC96Q2M329 555 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 AASDHQ4L235 1098 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-211ENST00000525970 CLEC9AQ6UXN8 241 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 LRRC8DQ7L1W4 858 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 KRT77Q7Z794 578 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 ARMC8Q8IUR7 673 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 LNX2Q8N448 690 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 LSMEM1Q8N8F7 131 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 B3GALNT2Q8NCR0 500 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 ATG4AQ8WYN0 398 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 FBXL20Q96IG2 436 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 HERC2P3Q9BVR0 1158 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 AMBRA1Q9C0C7 1298 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 ARHGAP39Q9C0H5 1083 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 GHITMQ9H3K2 345 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 ANKEF1Q9NU02 776 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 SERTAD3Q9UJW9 196 aa5.05□□□□□ -1.6
CSDE1-211ENST00000525970 MBD3L5A6NJ08 208 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-211ENST00000525970 H3BNC9 293 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 M0QYT0 321 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 ORC4O43929 436 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 PTP4A3O75365 173 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 C1RP00736 705 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 ERBB2P04626 1255 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 HOXD12P35452 270 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 STAT1P42224 750 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 MRPS35P82673 323 aaKnown RBP5.04□□□□□ -1.6
CSDE1-211ENST00000525970 LY6KQ17RY6 165 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 AAK1Q2M2I8 961 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 CBWD5Q5RIA9 395 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 SNX30Q5VWJ9 437 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 SLC9A4Q6AI14 798 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 CCDC144NLQ6NUI1 221 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 INO80CQ6PI98 192 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-211ENST00000525970 R3HCC1LQ7Z5L2 792 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms