RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 HSPH1Q92598 858 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 ATP2A3Q93084 1043 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 IGSF8Q969P0 613 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 NT5C3BQ969T7 300 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 NXPE3Q969Y0 559 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 TMA16Q96EY4 203 aaKnown RBP4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 RPRD1AQ96P16 312 aaPredicted RBP4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 PANX2Q96RD6 677 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 CDK5RAP1Q96SZ6 601 aaKnown RBP4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 WDCPQ9H6R7 721 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 LMAN1LQ9HAT1 526 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 PARVAQ9NVD7 372 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 DNAJC17Q9NVM6 304 aaKnown RBP4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 C2orf42Q9NWW7 574 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 WDR35Q9P2L0 1181 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 TBC1D14Q9P2M4 693 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 WNT16Q9UBV4 365 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 RAPGEFL1Q9UHV5 662 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 SALL4Q9UJQ4 1053 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 ANAPC7Q9UJX3 599 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 VANGL2Q9ULK5 521 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 STAP1Q9ULZ2 295 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 HBS1LQ9Y450 684 aaKnown RBP4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 PAXBP1Q9Y5B6 917 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 PCDHA13Q9Y5I0 950 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 HS3ST4Q9Y661 456 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 MYO16Q9Y6X6 1858 aa4.77□□□□□ -1.65
CHMP4A-202ENST00000524955 PATJQ8NI35 1801 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 KANSL1LA0AUZ9 987 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 MACROD2A1Z1Q3 448 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 SOBPA7XYQ1 873 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 WASH3PC4AMC7 463 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 PRRT4C9JH25 899 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 E9PAM4 449 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 F5H5T6 163 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 SLC9A3R1O14745 358 aaPredicted RBP4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 CREB3O43889 395 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 TULP3O75386 442 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 LRCH4O75427 683 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 ENDOD1O94919 500 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 ADH1CP00326 375 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 CYBBP04839 570 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 TMEM253P0C7T8 217 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 ALADP13716 330 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 IL1R2P27930 398 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 HOXD9P28356 352 aaPredicted RBP4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 MIPP30301 263 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 CD70P32970 193 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 ADRA1BP35368 520 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 TIE1P35590 1138 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 CYLC1P35663 651 aaPredicted RBP4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 SCNN1AP37088 669 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 CTSOP43234 321 aaPredicted RBP4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 PTPN9P43378 593 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 NOP2P46087 812 aaKnown RBP4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 DGKGP49619 791 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 CXCR3P49682 368 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 ZNF143P52747 638 aaPredicted RBP4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 NAP1L1P55209 391 aaKnown RBP4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 GSCP56915 257 aaPredicted RBP4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 STARD6P59095 220 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 TAS2R40P59535 323 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 GAD2Q05329 585 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 RING1Q06587 406 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 NR1H3Q13133 447 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 AUHQ13825 339 aaKnown RBP4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 GAS6Q14393 721 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 SPA17Q15506 151 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 GEN1Q17RS7 908 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 MPPE1Q53F39 396 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 ALFQ53S48 1182 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 C2orf27AQ580R0 203 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 C10orf76Q5T2E6 689 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 ADGRF1Q5T601 910 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 NUGGCQ68CJ6 796 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 GRAMD4Q6IC98 578 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 RWDD4Q6NW29 188 aaKnown RBP4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 FBXL22Q6P050 247 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 TSSK4Q6SA08 328 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 ZNF852Q6ZMS4 543 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 LEKR1Q6ZMV7 388 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 CYP4V2Q6ZWL3 525 aaPredicted RBP4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 SND1Q7KZF4 910 aaKnown RBP eCLIP4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 BEND5Q7L4P6 421 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 BNIPLQ7Z465 357 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 SLFN11Q7Z7L1 901 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 TMTC1Q8IUR5 882 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 LRRC8AQ8IWT6 810 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 UNC45BQ8IWX7 931 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 CCDC105Q8IYK2 499 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 APCDD1Q8J025 514 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 ZNF276Q8N554 614 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 ZNF366Q8N895 744 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 TMEM105Q8N8V8 129 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 SLC35G2Q8TBE7 412 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 ZNF564Q8TBZ8 553 aaPredicted RBP4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 CYB5D2Q8WUJ1 264 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 CENPIQ92674 756 aaPredicted RBP4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 DNASE1L2Q92874 299 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms