RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 PPIL6Q8IXY8 311 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 KIAA0319LQ8IZA0 1049 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 MEIOBQ8N635 442 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 MCPH1Q8NEM0 835 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 SCG3Q8WXD2 468 aaKnown RBP8.11□□□□□ -1.11
SPIDR-223ENST00000524033 PAFAH2Q99487 392 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 SH2D3AQ9BRG2 576 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 FAM213AQ9BRX8 229 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 C11orf84Q9BUA3 381 aaPredicted RBP8.11□□□□□ -1.11
SPIDR-223ENST00000524033 TUBB6Q9BUF5 446 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 C1QTNF1Q9BXJ1 281 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 VPS37BQ9H9H4 285 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 KCNK13Q9HB14 408 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 PNPLA8Q9NP80 782 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 ZNF302Q9NR11 478 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 PARVAQ9NVD7 372 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 KLHL11Q9NVR0 708 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 NMRK1Q9NWW6 199 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 MKS1Q9NXB0 559 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 TCEAL9Q9UHQ7 104 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 POLIQ9UNA4 740 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 RWDD3Q9Y3V2 267 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 TRPV2Q9Y5S1 764 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 C5orf42Q9H799 3197 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 EME2A4GXA9 379 aaPredicted RBP8.1□□□□□ -1.11
SPIDR-223ENST00000524033 ANKRD33BA6NCL7 494 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 C5orf67F2Z3F1 127 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 KLF11O14901 512 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 DKC1O60832 514 aaKnown RBP eCLIP8.1□□□□□ -1.11
SPIDR-223ENST00000524033 BANF1O75531 89 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 DGAT1O75907 488 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 DGKIO75912 1065 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 TMEM63AO94886 807 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 DKK1O94907 266 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 IL2RAP01589 272 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 PSAPP07602 524 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 STAG3L1P0CL83 205 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 KRT15P19012 456 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 ATP4AP20648 1035 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 GJC1P36383 396 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 RAP1GDS1P52306 607 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 ARL4CP56559 192 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 NLRP11P59045 1033 aaKnown RBP8.1□□□□□ -1.11
SPIDR-223ENST00000524033 RPL7AP62424 266 aaKnown RBP8.1□□□□□ -1.11
SPIDR-223ENST00000524033 NOP14P78316 857 aaKnown RBP8.1□□□□□ -1.11
SPIDR-223ENST00000524033 SLC25A11Q02978 314 aaKnown RBP8.1□□□□□ -1.11
SPIDR-223ENST00000524033 GAD2Q05329 585 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 ADCY1Q08828 1119 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 CLN3Q13286 438 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 PIGHQ14442 188 aaPredicted RBP8.1□□□□□ -1.11
SPIDR-223ENST00000524033 PRKD1Q15139 912 aaPredicted RBP8.1□□□□□ -1.11
SPIDR-223ENST00000524033 HIF1AQ16665 826 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 TSNAXIP1Q2TAA8 658 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 LEXMQ3ZCV2 418 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 TIGD5Q53EQ6 642 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 TCEAL5Q5H9L2 206 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 FNBP1LQ5T0N5 605 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 FYB2Q5VWT5 728 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 LMBRD2Q68DH5 695 aaPredicted RBP8.1□□□□□ -1.11
SPIDR-223ENST00000524033 TMEM214Q6NUQ4 689 aaKnown RBP8.1□□□□□ -1.11
SPIDR-223ENST00000524033 ZNF449Q6P9G9 518 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 FAM43BQ6ZT52 329 aaPredicted RBP8.1□□□□□ -1.11
SPIDR-223ENST00000524033 TRMT1LQ7Z2T5 733 aaKnown RBP8.1□□□□□ -1.11
SPIDR-223ENST00000524033 APBB1IPQ7Z5R6 666 aaPredicted RBP8.1□□□□□ -1.11
SPIDR-223ENST00000524033 PASD1Q8IV76 773 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 CCDC60Q8IWA6 550 aaPredicted RBP8.1□□□□□ -1.11
SPIDR-223ENST00000524033 CRIPAKQ8N1N5 446 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 TCP10LQ8TDR4 215 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 MICAL1Q8TDZ2 1067 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 ZFAND2BQ8WV99 257 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 NRG4Q8WWG1 115 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 DNAJC9Q8WXX5 260 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 PTPRN2Q92932 1015 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 ZNF689Q96CS4 500 aaPredicted RBP8.1□□□□□ -1.11
SPIDR-223ENST00000524033 PRR11Q96HE9 360 aaPredicted RBP8.1□□□□□ -1.11
SPIDR-223ENST00000524033 APOPT1Q96IL0 206 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 PAIP2Q9BPZ3 127 aaKnown RBP8.1□□□□□ -1.11
SPIDR-223ENST00000524033 BTBD10Q9BSF8 475 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 FAM167BQ9BTA0 163 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 KLF16Q9BXK1 252 aaPredicted RBP8.1□□□□□ -1.11
SPIDR-223ENST00000524033 POLR3FQ9H1D9 316 aaPredicted RBP8.1□□□□□ -1.11
SPIDR-223ENST00000524033 NPHS2Q9NP85 383 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 SLC17A7Q9P2U7 560 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 STOML1Q9UBI4 398 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 STRIP2Q9ULQ0 834 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 GINS2Q9Y248 185 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 LRCH1Q9Y2L9 728 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 PPME1Q9Y570 386 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 NUB1Q9Y5A7 615 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 PCDHB4Q9Y5E5 795 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 PCDHA10Q9Y5I2 948 aa8.1□□□□□ -1.11
SPIDR-223ENST00000524033 A0A0B4J269 797 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 A6NJY4 79 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 ZBTB42B2RXF5 422 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 H3BQ06 376 aaPredicted RBP8.09□□□□□ -1.11
SPIDR-223ENST00000524033 HGSO14964 777 aaPredicted RBP8.09□□□□□ -1.11
SPIDR-223ENST00000524033 HNRNPDLO14979 420 aaKnown RBP8.09□□□□□ -1.11
SPIDR-223ENST00000524033 GPR182O15218 404 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 GRM6O15303 877 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 NVLO15381 856 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms