RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 DLG4P78352 724 aa12.16□□□□□ -0.46
SDCBP-211ENST00000523441 EHHADHQ08426 723 aa12.16□□□□□ -0.46
SDCBP-211ENST00000523441 RTP5Q14D33 572 aa12.16□□□□□ -0.46
SDCBP-211ENST00000523441 BMT2Q1RMZ1 405 aa12.16□□□□□ -0.46
SDCBP-211ENST00000523441 TBC1D25Q3MII6 688 aa12.16□□□□□ -0.46
SDCBP-211ENST00000523441 ZNF394Q53GI3 561 aa12.16□□□□□ -0.46
SDCBP-211ENST00000523441 BROXQ5VW32 411 aa12.16□□□□□ -0.46
SDCBP-211ENST00000523441 ZNF776Q68DI1 518 aaPredicted RBP12.16□□□□□ -0.46
SDCBP-211ENST00000523441 ERICH1Q86X53 443 aa12.16□□□□□ -0.46
SDCBP-211ENST00000523441 RBBP8NLQ8NC74 664 aaPredicted RBP12.16□□□□□ -0.46
SDCBP-211ENST00000523441 LSM14AQ8ND56 463 aaKnown RBP12.16□□□□□ -0.46
SDCBP-211ENST00000523441 SAP25Q8TEE9 199 aa12.16□□□□□ -0.46
SDCBP-211ENST00000523441 NDRG1Q92597 394 aaKnown RBP12.16□□□□□ -0.46
SDCBP-211ENST00000523441 SKA1Q96BD8 255 aa12.16□□□□□ -0.46
SDCBP-211ENST00000523441 ORAI3Q9BRQ5 295 aa12.16□□□□□ -0.46
SDCBP-211ENST00000523441 TRIM4Q9C037 500 aa12.16□□□□□ -0.46
SDCBP-211ENST00000523441 MMRN2Q9H8L6 949 aa12.16□□□□□ -0.46
SDCBP-211ENST00000523441 SGK2Q9HBY8 427 aa12.16□□□□□ -0.46
SDCBP-211ENST00000523441 SLC39A2Q9NP94 309 aa12.16□□□□□ -0.46
SDCBP-211ENST00000523441 OSGEPQ9NPF4 335 aa12.16□□□□□ -0.46
SDCBP-211ENST00000523441 GDF3Q9NR23 364 aa12.16□□□□□ -0.46
SDCBP-211ENST00000523441 GGA2Q9UJY4 613 aa12.16□□□□□ -0.46
SDCBP-211ENST00000523441 STRIP2Q9ULQ0 834 aa12.16□□□□□ -0.46
SDCBP-211ENST00000523441 PCDHB1Q9Y5F3 818 aa12.16□□□□□ -0.46
SDCBP-211ENST00000523441 NYNRINQ9P2P1 1898 aaKnown RBP12.16□□□□□ -0.46
SDCBP-211ENST00000523441 MID1O15344 667 aa12.15□□□□□ -0.46
SDCBP-211ENST00000523441 EIF3DO15371 548 aaKnown RBP eCLIP12.15□□□□□ -0.46
SDCBP-211ENST00000523441 KLK10O43240 276 aa12.15□□□□□ -0.46
SDCBP-211ENST00000523441 DFNA5O60443 496 aa12.15□□□□□ -0.46
SDCBP-211ENST00000523441 TRIM21P19474 475 aaKnown RBP12.15□□□□□ -0.46
SDCBP-211ENST00000523441 HOXD9P28356 352 aaPredicted RBP12.15□□□□□ -0.46
SDCBP-211ENST00000523441 EPHA8P29322 1005 aaPredicted RBP12.15□□□□□ -0.46
SDCBP-211ENST00000523441 PIK3CAP42336 1068 aa12.15□□□□□ -0.46
SDCBP-211ENST00000523441 SGSHP51688 502 aa12.15□□□□□ -0.46
SDCBP-211ENST00000523441 KIF11P52732 1056 aa12.15□□□□□ -0.46
SDCBP-211ENST00000523441 GALCP54803 685 aa12.15□□□□□ -0.46
SDCBP-211ENST00000523441 TMPRSS3P57727 454 aa12.15□□□□□ -0.46
SDCBP-211ENST00000523441 E2F5Q15329 346 aa12.15□□□□□ -0.46
SDCBP-211ENST00000523441 MPPE1Q53F39 396 aa12.15□□□□□ -0.46
SDCBP-211ENST00000523441 MBLAC2Q68D91 279 aa12.15□□□□□ -0.46
SDCBP-211ENST00000523441 KLHDC10Q6PID8 442 aa12.15□□□□□ -0.46
SDCBP-211ENST00000523441 ZC3H3Q8IXZ2 948 aaKnown RBP12.15□□□□□ -0.46
SDCBP-211ENST00000523441 CRYBG2Q8N1P7 616 aa12.15□□□□□ -0.46
SDCBP-211ENST00000523441 ZNF507Q8TCN5 953 aa12.15□□□□□ -0.46
SDCBP-211ENST00000523441 DHX58Q96C10 678 aa12.15□□□□□ -0.46
SDCBP-211ENST00000523441 SERAC1Q96JX3 654 aa12.15□□□□□ -0.46
SDCBP-211ENST00000523441 OMDQ99983 421 aa12.15□□□□□ -0.46
SDCBP-211ENST00000523441 BLZF1Q9H2G9 400 aa12.15□□□□□ -0.46
SDCBP-211ENST00000523441 TMEM245Q9H330 911 aa12.15□□□□□ -0.46
SDCBP-211ENST00000523441 STIM2Q9P246 746 aa12.15□□□□□ -0.46
SDCBP-211ENST00000523441 DOCK9Q9BZ29 2069 aa12.15□□□□□ -0.46
SDCBP-211ENST00000523441 A0A1W2PPC4 97 aa12.14□□□□□ -0.47
SDCBP-211ENST00000523441 TIMM44O43615 452 aa12.14□□□□□ -0.47
SDCBP-211ENST00000523441 STX6O43752 255 aa12.14□□□□□ -0.47
SDCBP-211ENST00000523441 C4BPAP04003 597 aaKnown RBP12.14□□□□□ -0.47
SDCBP-211ENST00000523441 C1SP09871 688 aa12.14□□□□□ -0.47
SDCBP-211ENST00000523441 PABPC1P11940 636 aaKnown RBP12.14□□□□□ -0.47
SDCBP-211ENST00000523441 MYF5P13349 255 aa12.14□□□□□ -0.47
SDCBP-211ENST00000523441 POLR2EP19388 210 aaKnown RBP12.14□□□□□ -0.47
SDCBP-211ENST00000523441 MAT2AP31153 395 aaKnown RBP12.14□□□□□ -0.47
SDCBP-211ENST00000523441 CD70P32970 193 aa12.14□□□□□ -0.47
SDCBP-211ENST00000523441 PSMD8P48556 350 aa12.14□□□□□ -0.47
SDCBP-211ENST00000523441 ARRB1P49407 418 aaPredicted RBP12.14□□□□□ -0.47
SDCBP-211ENST00000523441 PSEN1P49768 467 aa12.14□□□□□ -0.47
SDCBP-211ENST00000523441 PCBP4P57723 403 aaKnown RBP12.14□□□□□ -0.47
SDCBP-211ENST00000523441 YWHAGP61981 247 aaKnown RBP eCLIP12.14□□□□□ -0.47
SDCBP-211ENST00000523441 DAB2P98082 770 aa12.14□□□□□ -0.47
SDCBP-211ENST00000523441 INSM1Q01101 510 aaPredicted RBP12.14□□□□□ -0.47
SDCBP-211ENST00000523441 KIAA1614Q5VZ46 1190 aa12.14□□□□□ -0.47
SDCBP-211ENST00000523441 EPM2AIP1Q7L775 607 aaPredicted RBP12.14□□□□□ -0.47
SDCBP-211ENST00000523441 TMC6Q7Z403 805 aa12.14□□□□□ -0.47
SDCBP-211ENST00000523441 ADIPOR2Q86V24 386 aa12.14□□□□□ -0.47
SDCBP-211ENST00000523441 MMAAQ8IVH4 418 aaKnown RBP12.14□□□□□ -0.47
SDCBP-211ENST00000523441 ZNF248Q8NDW4 579 aa12.14□□□□□ -0.47
SDCBP-211ENST00000523441 WFDC5Q8TCV5 224 aa12.14□□□□□ -0.47
SDCBP-211ENST00000523441 TMA16Q96EY4 203 aaKnown RBP12.14□□□□□ -0.47
SDCBP-211ENST00000523441 HNRNPABQ99729 332 aaKnown RBP12.14□□□□□ -0.47
SDCBP-211ENST00000523441 SLC2A11Q9BYW1 496 aa12.14□□□□□ -0.47
SDCBP-211ENST00000523441 OSBPL2Q9H1P3 480 aa12.14□□□□□ -0.47
SDCBP-211ENST00000523441 NEUROG2Q9H2A3 272 aa12.14□□□□□ -0.47
SDCBP-211ENST00000523441 PABPC3Q9H361 631 aaKnown RBP12.14□□□□□ -0.47
SDCBP-211ENST00000523441 SFMBT1Q9UHJ3 866 aa12.14□□□□□ -0.47
SDCBP-211ENST00000523441 PIEZO2Q9H5I5 2752 aa12.13□□□□□ -0.47
SDCBP-211ENST00000523441 GOLGA6L7A0A1B0GV03 622 aa12.13□□□□□ -0.47
SDCBP-211ENST00000523441 CAPN8A6NHC0 703 aa12.13□□□□□ -0.47
SDCBP-211ENST00000523441 LRRC72A6NJI9 287 aa12.13□□□□□ -0.47
SDCBP-211ENST00000523441 B8ZZF3 427 aa12.13□□□□□ -0.47
SDCBP-211ENST00000523441 PAPSS1O43252 624 aaPredicted RBP12.13□□□□□ -0.47
SDCBP-211ENST00000523441 TBL1XO60907 577 aa12.13□□□□□ -0.47
SDCBP-211ENST00000523441 SIN3BO75182 1162 aa12.13□□□□□ -0.47
SDCBP-211ENST00000523441 MT-CO3P00414 261 aa12.13□□□□□ -0.47
SDCBP-211ENST00000523441 HLA-DRAP01903 254 aa12.13□□□□□ -0.47
SDCBP-211ENST00000523441 CKMT2P17540 419 aa12.13□□□□□ -0.47
SDCBP-211ENST00000523441 ASPAP45381 313 aa12.13□□□□□ -0.47
SDCBP-211ENST00000523441 HARS2P49590 506 aaKnown RBP12.13□□□□□ -0.47
SDCBP-211ENST00000523441 GABREP78334 506 aa12.13□□□□□ -0.47
SDCBP-211ENST00000523441 KCNJ12Q14500 433 aa12.13□□□□□ -0.47
SDCBP-211ENST00000523441 RABEP1Q15276 862 aa12.13□□□□□ -0.47
SDCBP-211ENST00000523441 SGSM1Q2NKQ1 1148 aa12.13□□□□□ -0.47
SDCBP-211ENST00000523441 POM121L1PQ3SYA9 428 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms