RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 CSNK1EP49674 416 aaKnown RBP16.08■□□□□ 0.16
MRPS28-209ENST00000522987 DAOAP59103 153 aa16.08■□□□□ 0.16
MRPS28-209ENST00000522987 EIF4HQ15056 248 aaKnown RBP16.08■□□□□ 0.16
MRPS28-209ENST00000522987 ZNF658Q5TYW1 1059 aaPredicted RBP16.08■□□□□ 0.16
MRPS28-209ENST00000522987 METTL3Q86U44 580 aaKnown RBP16.08■□□□□ 0.16
MRPS28-209ENST00000522987 MARCH9Q86YJ5 346 aa16.08■□□□□ 0.16
MRPS28-209ENST00000522987 FMR1NBQ8N0W7 255 aaPredicted RBP16.08■□□□□ 0.16
MRPS28-209ENST00000522987 UBR7Q8N806 425 aa16.08■□□□□ 0.16
MRPS28-209ENST00000522987 OR2T3Q8NH03 318 aa16.08■□□□□ 0.16
MRPS28-209ENST00000522987 DNASE2BQ8WZ79 361 aa16.08■□□□□ 0.16
MRPS28-209ENST00000522987 ZSWIM1Q9BR11 485 aa16.08■□□□□ 0.16
MRPS28-209ENST00000522987 NUP58Q9BVL2 599 aa16.08■□□□□ 0.16
MRPS28-209ENST00000522987 SLC2A11Q9BYW1 496 aa16.08■□□□□ 0.16
MRPS28-209ENST00000522987 MIS12Q9H081 205 aa16.08■□□□□ 0.16
MRPS28-209ENST00000522987 LHX5Q9H2C1 402 aa16.08■□□□□ 0.16
MRPS28-209ENST00000522987 RMND1Q9NWS8 449 aa16.08■□□□□ 0.16
MRPS28-209ENST00000522987 ARMCX3Q9UH62 379 aaPredicted RBP16.08■□□□□ 0.16
MRPS28-209ENST00000522987 GGA2Q9UJY4 613 aa16.08■□□□□ 0.16
MRPS28-209ENST00000522987 HBS1LQ9Y450 684 aaKnown RBP16.08■□□□□ 0.16
MRPS28-209ENST00000522987 ATP6V1DQ9Y5K8 247 aa16.08■□□□□ 0.16
MRPS28-209ENST00000522987 TMEM8BA6NDV4 472 aa16.07■□□□□ 0.16
MRPS28-209ENST00000522987 M0QYV0 167 aa16.07■□□□□ 0.16
MRPS28-209ENST00000522987 KCNK3O14649 394 aa16.07■□□□□ 0.16
MRPS28-209ENST00000522987 NPC1O15118 1278 aa16.07■□□□□ 0.16
MRPS28-209ENST00000522987 SLC16A3O15427 465 aaKnown RBP16.07■□□□□ 0.16
MRPS28-209ENST00000522987 PABPC1P11940 636 aaKnown RBP16.07■□□□□ 0.16
MRPS28-209ENST00000522987 OXTRP30559 389 aa16.07■□□□□ 0.16
MRPS28-209ENST00000522987 SLC6A4P31645 630 aa16.07■□□□□ 0.16
MRPS28-209ENST00000522987 RDXP35241 583 aaKnown RBP16.07■□□□□ 0.16
MRPS28-209ENST00000522987 YWHAEP62258 255 aaKnown RBP16.07■□□□□ 0.16
MRPS28-209ENST00000522987 FKBP3Q00688 224 aaKnown RBP16.07■□□□□ 0.16
MRPS28-209ENST00000522987 MBLAC2Q68D91 279 aa16.07■□□□□ 0.16
MRPS28-209ENST00000522987 KLHL10Q6JEL2 608 aa16.07■□□□□ 0.16
MRPS28-209ENST00000522987 PMF1Q6P1K2 205 aa16.07■□□□□ 0.16
MRPS28-209ENST00000522987 RAB44Q7Z6P3 723 aaPredicted RBP16.07■□□□□ 0.16
MRPS28-209ENST00000522987 SLCO6A1Q86UG4 719 aa16.07■□□□□ 0.16
MRPS28-209ENST00000522987 ADIPOR2Q86V24 386 aa16.07■□□□□ 0.16
MRPS28-209ENST00000522987 PPM1KQ8N3J5 372 aa16.07■□□□□ 0.16
MRPS28-209ENST00000522987 SMARCE1Q969G3 411 aa16.07■□□□□ 0.16
MRPS28-209ENST00000522987 SLC35C1Q96A29 364 aa16.07■□□□□ 0.16
MRPS28-209ENST00000522987 MYEOVQ96EZ4 313 aa16.07■□□□□ 0.16
MRPS28-209ENST00000522987 FAXDC2Q96IV6 333 aa16.07■□□□□ 0.16
MRPS28-209ENST00000522987 ABCC13Q9NSE7 274 aa16.07■□□□□ 0.16
MRPS28-209ENST00000522987 COQ4Q9Y3A0 265 aa16.07■□□□□ 0.16
MRPS28-209ENST00000522987 ZFYVE26Q68DK2 2539 aa16.07■□□□□ 0.16
MRPS28-209ENST00000522987 PKD1L2Q7Z442 2459 aa16.06■□□□□ 0.16
MRPS28-209ENST00000522987 FSBPO95073 299 aa16.06■□□□□ 0.16
MRPS28-209ENST00000522987 SETSIPP0DME0 302 aa16.06■□□□□ 0.16
MRPS28-209ENST00000522987 CD44P16070 742 aaKnown RBP16.06■□□□□ 0.16
MRPS28-209ENST00000522987 MATKP42679 507 aa16.06■□□□□ 0.16
MRPS28-209ENST00000522987 FMO5P49326 533 aa16.06■□□□□ 0.16
MRPS28-209ENST00000522987 MCCD1P59942 119 aaPredicted RBP16.06■□□□□ 0.16
MRPS28-209ENST00000522987 CAMK2GQ13555 558 aaPredicted RBP16.06■□□□□ 0.16
MRPS28-209ENST00000522987 ZNF423Q2M1K9 1284 aa16.06■□□□□ 0.16
MRPS28-209ENST00000522987 HLA-BQ31612 363 aa16.06■□□□□ 0.16
MRPS28-209ENST00000522987 CCDC40Q4G0X9 1142 aa16.06■□□□□ 0.16
MRPS28-209ENST00000522987 CCDC157Q569K6 752 aa16.06■□□□□ 0.16
MRPS28-209ENST00000522987 ADGRF1Q5T601 910 aa16.06■□□□□ 0.16
MRPS28-209ENST00000522987 RRAGAQ7L523 313 aa16.06■□□□□ 0.16
MRPS28-209ENST00000522987 CADM4Q8NFZ8 388 aa16.06■□□□□ 0.16
MRPS28-209ENST00000522987 ADAM32Q8TC27 787 aa16.06■□□□□ 0.16
MRPS28-209ENST00000522987 CCDC34Q96HJ3 373 aa16.06■□□□□ 0.16
MRPS28-209ENST00000522987 NT5C1BQ96P26 610 aa16.06■□□□□ 0.16
MRPS28-209ENST00000522987 TM7SF3Q9NS93 570 aa16.06■□□□□ 0.16
MRPS28-209ENST00000522987 PLA2G4CQ9UP65 541 aa16.06■□□□□ 0.16
MRPS28-209ENST00000522987 ASPMQ8IZT6 3477 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 SPEGQ15772 3267 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 GOLGA6L4A6NEF3 574 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 FAM47DPA6NHR8 397 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 H0Y626 953 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 TAF4O00268 1085 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 TRIM16O95361 564 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 LTFP02788 710 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 ZNF132P52740 706 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 TBX4P57082 545 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 RPS14P62263 151 aaKnown RBP16.05■□□□□ 0.16
MRPS28-209ENST00000522987 IL9RQ01113 521 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 SCAPQ12770 1279 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 SLC14A1Q13336 389 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 PTPRNQ16849 979 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 PKDCCQ504Y2 493 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 NADSYN1Q6IA69 706 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 MMS22LQ6ZRQ5 1243 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 ARHGEF19Q8IW93 802 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 CFAP52Q8N1V2 620 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 CARNMT1Q8N4J0 409 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 GANCQ8TET4 914 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 WFIKKN2Q8TEU8 576 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 KCTD13Q8WZ19 329 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 TMEM245Q9H330 911 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 PRSS16Q9NQE7 514 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 CNGB3Q9NQW8 809 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 PCOLCE2Q9UKZ9 415 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.05■□□□□ 0.167e-6■■■■■ 27.7
MRPS28-209ENST00000522987 BTBD3Q9Y2F9 522 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 SNX11Q9Y5W9 270 aa16.05■□□□□ 0.16
MRPS28-209ENST00000522987 DMXL2Q8TDJ6 3036 aa16.04■□□□□ 0.16
MRPS28-209ENST00000522987 TIMM44O43615 452 aa16.04■□□□□ 0.16
MRPS28-209ENST00000522987 SMC2O95347 1197 aa16.04■□□□□ 0.16
MRPS28-209ENST00000522987 SEMA4FO95754 770 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms