RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 SPOPLQ6IQ16 392 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 FOXR2Q6PJQ5 311 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 VSTM1Q6UX27 236 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 SCARA5Q6ZMJ2 495 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 CLEC17AQ6ZS10 378 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 PAQR9Q6ZVX9 377 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 MFSD6LQ8IWD5 586 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 CCDC105Q8IYK2 499 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 FAM186BQ8IYM0 893 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 PLD6Q8N2A8 252 aaKnown RBP6.29□□□□□ -1.4
SPIDR-216ENST00000521918 B3GALNT2Q8NCR0 500 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 TAS1R2Q8TE23 839 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 DEPDC1BQ8WUY9 529 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 TAF4BQ92750 862 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 DNASE1L2Q92874 299 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 SMARCE1Q969G3 411 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 CCDC47Q96A33 483 aaKnown RBP6.29□□□□□ -1.4
SPIDR-216ENST00000521918 CCDC34Q96HJ3 373 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 PCED1BQ96HM7 432 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 SPATA17Q96L03 361 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 Q96M66 194 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 MMS19Q96T76 1030 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 TTLL2Q9BWV7 592 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 ZNF518BQ9C0D4 1074 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 GPR88Q9GZN0 384 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 APOBEC3GQ9HC16 384 aaKnown RBP6.29□□□□□ -1.4
SPIDR-216ENST00000521918 ZFP14Q9HCL3 533 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 TRPV5Q9NQA5 729 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 RMND1Q9NWS8 449 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 OBP2AQ9NY56 170 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 CHMP5Q9NZZ3 219 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 MAN1B1Q9UKM7 699 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 FBXL21Q9UKT6 434 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 CA14Q9ULX7 337 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 FRMD4BQ9Y2L6 1034 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 DMXL1Q9Y485 3027 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 EP300Q09472 2414 aaPredicted RBP6.29□□□□□ -1.4
SPIDR-216ENST00000521918 FAM186AA6NE01 2351 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 TICRRQ7Z2Z1 1910 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 ZNF638Q14966 1978 aaKnown RBP6.28□□□□□ -1.4
SPIDR-216ENST00000521918 SLC38A8A6NNN8 435 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 HEPACAM2A8MVW5 462 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 KIAA1324LA8MWY0 1029 aaPredicted RBP6.28□□□□□ -1.4
SPIDR-216ENST00000521918 KINO60870 393 aaKnown RBP6.28□□□□□ -1.4
SPIDR-216ENST00000521918 SMC2O95347 1197 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 CEACAM5P06731 702 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 PDGFRBP09619 1106 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 PSMC3P17980 439 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 PTPN1P18031 435 aaKnown RBP6.28□□□□□ -1.4
SPIDR-216ENST00000521918 BDNFP23560 247 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 CCNE1P24864 410 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 DDX6P26196 483 aaKnown RBP eCLIP6.28□□□□□ -1.4
SPIDR-216ENST00000521918 RPL13P26373 211 aaKnown RBP6.28□□□□□ -1.4
SPIDR-216ENST00000521918 GTF2H1P32780 548 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 GNL1P36915 607 aaPredicted RBP6.28□□□□□ -1.4
SPIDR-216ENST00000521918 PIK3CAP42336 1068 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 GCLMP48507 274 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 CDH8P55286 799 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 RPL10AP62906 217 aaKnown RBP6.28□□□□□ -1.4
SPIDR-216ENST00000521918 NOP14P78316 857 aaKnown RBP6.28□□□□□ -1.4
SPIDR-216ENST00000521918 PRKCQQ04759 706 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 LRRC63Q05C16 580 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 FZD5Q13467 585 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 TRPC3Q13507 836 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 MAPRE1Q15691 268 aaKnown RBP6.28□□□□□ -1.4
SPIDR-216ENST00000521918 NKPD1Q17RQ9 610 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 SGSM1Q2NKQ1 1148 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 CBWD6Q4V339 395 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 SLC44A4Q53GD3 710 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 ZNF667Q5HYK9 610 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 CBWD3Q5JTY5 395 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 CBWD5Q5RIA9 395 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 GPR158Q5T848 1215 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 ANKRD40Q6AI12 368 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 TTI2Q6NXR4 508 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 C4orf50Q6ZRC1 276 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 SPATA2LQ8IUW3 424 aaPredicted RBP6.28□□□□□ -1.4
SPIDR-216ENST00000521918 ARID3BQ8IVW6 561 aaPredicted RBP6.28□□□□□ -1.4
SPIDR-216ENST00000521918 SPACA3Q8IXA5 215 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 CMTM8Q8IZV2 173 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 FLCNQ8NFG4 579 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 PJA1Q8NG27 643 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 OR6B3Q8NGW1 331 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 OR6P1Q8NGX9 317 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 RNF141Q8WVD5 230 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 SEMA4DQ92854 862 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 SLC35C1Q96A29 364 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 EEF2KMTQ96G04 330 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 COX4I2Q96KJ9 171 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 C8orf48Q96LL4 319 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 CEP295NLQ96MC4 621 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 KREMEN1Q96MU8 473 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 TWNKQ96RR1 684 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 SLC46A2Q9BY10 475 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 B3GNT5Q9BYG0 378 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 GTPBP4Q9BZE4 634 aaKnown RBP6.28□□□□□ -1.4
SPIDR-216ENST00000521918 TNKS2Q9H2K2 1166 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 SNX25Q9H3E2 840 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 MFSD1Q9H3U5 465 aa6.28□□□□□ -1.4
SPIDR-216ENST00000521918 SLITRK6Q9H5Y7 841 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms