RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 PSMA2P25787 234 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 CLCN5P51795 746 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 GALCP54803 685 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 VCPP55072 806 aaKnown RBP12.96□□□□□ -0.33
HDAC2-211ENST00000521233 RPL7AP62424 266 aaKnown RBP12.96□□□□□ -0.33
HDAC2-211ENST00000521233 GRSF1Q12849 480 aaKnown RBP eCLIP12.96□□□□□ -0.33
HDAC2-211ENST00000521233 SPA17Q15506 151 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 CDO1Q16878 200 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 CCDC14Q49A88 953 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 FAM133BQ5BKY9 247 aaKnown RBP12.96□□□□□ -0.33
HDAC2-211ENST00000521233 DGKKQ5KSL6 1271 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 RABGAP1LQ5R372 815 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 MPP7Q5T2T1 576 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 TPGS1Q6ZTW0 290 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 NUDT18Q6ZVK8 323 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 TMEM25Q86YD3 366 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 CCDC117Q8IWD4 279 aaPredicted RBP12.96□□□□□ -0.33
HDAC2-211ENST00000521233 PJA1Q8NG27 643 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 DDI1Q8WTU0 396 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 FAM172AQ8WUF8 416 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 CENPIQ92674 756 aaPredicted RBP12.96□□□□□ -0.33
HDAC2-211ENST00000521233 IER2Q9BTL4 223 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 SLC2A11Q9BYW1 496 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 THAP2Q9H0W7 228 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 SPTLC3Q9NUV7 552 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 ARHGEF38Q9NXL2 777 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 UVRAGQ9P2Y5 699 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 MYO1AQ9UBC5 1043 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 INTUQ9ULD6 942 aa12.96□□□□□ -0.33
HDAC2-211ENST00000521233 MUC3AQ02505 3323 aa12.96□□□□□ -0.34
HDAC2-211ENST00000521233 KIAA1549LQ6ZVL6 1849 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 TMEM191CA6NGB0 347 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 GFRA2O00451 464 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 CCP110O43303 1012 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 NRDCO43847 1150 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 RNF8O76064 485 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 TFE3P19532 575 aaPredicted RBP12.95□□□□□ -0.34
HDAC2-211ENST00000521233 TACR2P21452 398 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 OPRD1P41143 372 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 AIF1P55008 147 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 ACAP1Q15027 740 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 PON2Q15165 354 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 C15orf59Q2T9L4 293 aaPredicted RBP12.95□□□□□ -0.34
HDAC2-211ENST00000521233 GAB4Q2WGN9 574 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 FBXO43Q4G163 708 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 TMEM196Q5HYL7 178 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 IER5LQ5T953 404 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 FYB2Q5VWT5 728 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 CWF19L1Q69YN2 538 aaKnown RBP12.95□□□□□ -0.34
HDAC2-211ENST00000521233 ASTLQ6HA08 431 aaPredicted RBP12.95□□□□□ -0.34
HDAC2-211ENST00000521233 NADSYN1Q6IA69 706 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 GRAMD4Q6IC98 578 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 TXNDC11Q6PKC3 985 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 FAM131BQ86XD5 332 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 RHOT2Q8IXI1 618 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 ETFBKMTQ8IXQ9 262 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 SYNPOQ8N3V7 929 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 NTAN1Q96AB6 310 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 TMA16Q96EY4 203 aaKnown RBP12.95□□□□□ -0.34
HDAC2-211ENST00000521233 PNKPQ96T60 521 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 BAG1Q99933 345 aaPredicted RBP12.95□□□□□ -0.34
HDAC2-211ENST00000521233 NUP85Q9BW27 656 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 ADAM33Q9BZ11 813 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 TKTL2Q9H0I9 626 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 DNAJC17Q9NVM6 304 aaKnown RBP12.95□□□□□ -0.34
HDAC2-211ENST00000521233 CTTNBP2NLQ9P2B4 639 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 DEC1Q9P2X7 70 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 NDRG2Q9UN36 371 aaKnown RBP12.95□□□□□ -0.34
HDAC2-211ENST00000521233 SIT1Q9Y3P8 196 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 TRIOO75962 3097 aa12.95□□□□□ -0.34
HDAC2-211ENST00000521233 MIA3Q5JRA6 1907 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 FAM86C2PA6NEL3 165 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 FAM170BA6NMN3 283 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 EIF3CLB5ME19 914 aaKnown RBP12.94□□□□□ -0.34
HDAC2-211ENST00000521233 TULP3O75386 442 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 PAGE1O75459 146 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 LCA5LO95447 670 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 PDGFBP01127 241 aaPredicted RBP12.94□□□□□ -0.34
HDAC2-211ENST00000521233 APODP05090 189 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 TARSP26639 723 aaKnown RBP12.94□□□□□ -0.34
HDAC2-211ENST00000521233 GRIA2P42262 883 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 RPS9P46781 194 aaKnown RBP12.94□□□□□ -0.34
HDAC2-211ENST00000521233 HDAC4P56524 1084 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 PIGHQ14442 188 aaPredicted RBP12.94□□□□□ -0.34
HDAC2-211ENST00000521233 E2F5Q15329 346 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 MS4A13Q5J8X5 152 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 PIK3R6Q5UE93 754 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 RAP1GAP2Q684P5 730 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 RFWD3Q6PCD5 774 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 LRRC31Q6UY01 552 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 DNAAF5Q86Y56 855 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 CCDC105Q8IYK2 499 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 LGI2Q8N0V4 545 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 TXLNBQ8N3L3 684 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 CCDC112Q8NEF3 446 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 ZNF564Q8TBZ8 553 aaPredicted RBP12.94□□□□□ -0.34
HDAC2-211ENST00000521233 RFFLQ8WZ73 363 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 CHFRQ96EP1 664 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 PDLIM2Q96JY6 352 aa12.94□□□□□ -0.34
HDAC2-211ENST00000521233 HAPLN3Q96S86 360 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms