RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 CPXM1Q96SM3 734 aa17.72■□□□□ 0.43
SQLE-205ENST00000521232 DDX50Q9BQ39 737 aaKnown RBP17.72■□□□□ 0.43
SQLE-205ENST00000521232 NAA15Q9BXJ9 866 aaKnown RBP17.72■□□□□ 0.43
SQLE-205ENST00000521232 RXFP3Q9NSD7 469 aa17.72■□□□□ 0.43
SQLE-205ENST00000521232 ASNSD1Q9NWL6 643 aa17.72■□□□□ 0.43
SQLE-205ENST00000521232 TJP2Q9UDY2 1190 aa17.72■□□□□ 0.43
SQLE-205ENST00000521232 NCOR2Q9Y618 2525 aa17.71■□□□□ 0.43
SQLE-205ENST00000521232 CKAP5Q14008 2032 aa17.71■□□□□ 0.43
SQLE-205ENST00000521232 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.71■□□□□ 0.43
SQLE-205ENST00000521232 GOLGA6L22H0YM25 854 aa17.71■□□□□ 0.43
SQLE-205ENST00000521232 TBL1XO60907 577 aa17.71■□□□□ 0.43
SQLE-205ENST00000521232 PNMA6AP0CW24 399 aaPredicted RBP17.71■□□□□ 0.43
SQLE-205ENST00000521232 DHPSP49366 369 aaPredicted RBP17.71■□□□□ 0.43
SQLE-205ENST00000521232 ZNF234Q14588 700 aa17.71■□□□□ 0.43
SQLE-205ENST00000521232 STARD3Q14849 445 aa17.71■□□□□ 0.43
SQLE-205ENST00000521232 DRAP1Q14919 205 aaPredicted RBP17.71■□□□□ 0.43
SQLE-205ENST00000521232 TAF5Q15542 800 aa17.71■□□□□ 0.43
SQLE-205ENST00000521232 EFHC1Q5JVL4 640 aa17.71■□□□□ 0.43
SQLE-205ENST00000521232 SLC36A4Q6YBV0 504 aa17.71■□□□□ 0.43
SQLE-205ENST00000521232 METTL3Q86U44 580 aaKnown RBP17.71■□□□□ 0.43
SQLE-205ENST00000521232 ADIPOR2Q86V24 386 aa17.71■□□□□ 0.43
SQLE-205ENST00000521232 PASD1Q8IV76 773 aa17.71■□□□□ 0.43
SQLE-205ENST00000521232 TMEFF1Q8IYR6 380 aa17.71■□□□□ 0.43
SQLE-205ENST00000521232 WFIKKN2Q8TEU8 576 aa17.71■□□□□ 0.43
SQLE-205ENST00000521232 NOX5Q96PH1 765 aa17.71■□□□□ 0.43
SQLE-205ENST00000521232 CIPCQ9C0C6 399 aa17.71■□□□□ 0.43
SQLE-205ENST00000521232 TNRC6BQ9UPQ9 1833 aaKnown RBP17.7■□□□□ 0.42
SQLE-205ENST00000521232 IGHV1OR15-9A0A0B4J2B8 117 aa17.7■□□□□ 0.42
SQLE-205ENST00000521232 DCDC2BA2VCK2 349 aa17.7■□□□□ 0.42
SQLE-205ENST00000521232 PES1O00541 588 aaKnown RBP17.7■□□□□ 0.42
SQLE-205ENST00000521232 TRUB2O95900 331 aaKnown RBP17.7■□□□□ 0.42
SQLE-205ENST00000521232 SNX16P57768 344 aa17.7■□□□□ 0.42
SQLE-205ENST00000521232 FUT11Q495W5 492 aa17.7■□□□□ 0.42
SQLE-205ENST00000521232 CDKAL1Q5VV42 579 aa17.7■□□□□ 0.42
SQLE-205ENST00000521232 CYP2U1Q7Z449 544 aa17.7■□□□□ 0.42
SQLE-205ENST00000521232 ZNF557Q8N988 423 aaPredicted RBP17.7■□□□□ 0.42
SQLE-205ENST00000521232 SORCS1Q8WY21 1168 aa17.7■□□□□ 0.42
SQLE-205ENST00000521232 ERLEC1Q96DZ1 483 aa17.7■□□□□ 0.42
SQLE-205ENST00000521232 LMLNQ96KR4 655 aa17.7■□□□□ 0.42
SQLE-205ENST00000521232 SLC2A13Q96QE2 648 aa17.7■□□□□ 0.42
SQLE-205ENST00000521232 ABCB8Q9NUT2 735 aa17.7■□□□□ 0.42
SQLE-205ENST00000521232 GGA2Q9UJY4 613 aa17.7■□□□□ 0.42
SQLE-205ENST00000521232 FHOD1Q9Y613 1164 aa17.7■□□□□ 0.42
SQLE-205ENST00000521232 TM4SF5O14894 197 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 KHNYNO15037 678 aaKnown RBP17.69■□□□□ 0.42
SQLE-205ENST00000521232 AP5Z1O43299 807 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 PABPC1P11940 636 aaKnown RBP17.69■□□□□ 0.42
SQLE-205ENST00000521232 UCHL3P15374 230 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 PTGER3P43115 390 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 ARID5AQ03989 594 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 RAPGEF1Q13905 1077 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 DCAF6Q58WW2 860 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 ZC3H12AQ5D1E8 599 aaKnown RBP17.69■□□□□ 0.42
SQLE-205ENST00000521232 MS4A13Q5J8X5 152 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 TCEAL6Q6IPX3 200 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 C11orf57Q6ZUT1 292 aaPredicted RBP17.69■□□□□ 0.42
SQLE-205ENST00000521232 CHST9Q7L1S5 443 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 DEFB106AQ8N104 65 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 AHI1Q8N157 1196 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 HJURPQ8NCD3 748 aaPredicted RBP17.69■□□□□ 0.42
SQLE-205ENST00000521232 C1orf131Q8NDD1 294 aaKnown RBP17.69■□□□□ 0.42
SQLE-205ENST00000521232 FIBINQ8TAL6 211 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 WFDC5Q8TCV5 224 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 PIGKQ92643 395 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 TCEAL3Q969E4 200 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 MYEOVQ96EZ4 313 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 PRICKLE1Q96MT3 831 aaPredicted RBP17.69■□□□□ 0.42
SQLE-205ENST00000521232 STK33Q9BYT3 514 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 MKRN2Q9H000 416 aaKnown RBP17.69■□□□□ 0.42
SQLE-205ENST00000521232 SLC6A17Q9H1V8 727 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 PRDM16Q9HAZ2 1276 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 PLCB1Q9NQ66 1216 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.69■□□□□ 0.42
SQLE-205ENST00000521232 TAB2Q9NYJ8 693 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 PLA2G4CQ9UP65 541 aa17.69■□□□□ 0.42
SQLE-205ENST00000521232 MED19A0JLT2 244 aaPredicted RBP17.68■□□□□ 0.42
SQLE-205ENST00000521232 SYNCRIPO60506 623 aaKnown RBP17.68■□□□□ 0.42
SQLE-205ENST00000521232 HSF2BPO75031 334 aa17.68■□□□□ 0.42
SQLE-205ENST00000521232 APOEP02649 317 aa17.68■□□□□ 0.42
SQLE-205ENST00000521232 ERBB2P04626 1255 aa17.68■□□□□ 0.42
SQLE-205ENST00000521232 CYP11B1P15538 503 aa17.68■□□□□ 0.42
SQLE-205ENST00000521232 PRKCHP24723 683 aa17.68■□□□□ 0.42
SQLE-205ENST00000521232 CD70P32970 193 aa17.68■□□□□ 0.42
SQLE-205ENST00000521232 CDH5P33151 784 aaPredicted RBP17.68■□□□□ 0.42
SQLE-205ENST00000521232 DPP6P42658 865 aa17.68■□□□□ 0.42
SQLE-205ENST00000521232 PITX1P78337 314 aaPredicted RBP17.68■□□□□ 0.42
SQLE-205ENST00000521232 CDK17Q00537 523 aa17.68■□□□□ 0.42
SQLE-205ENST00000521232 SLC6A3Q01959 620 aa17.68■□□□□ 0.42
SQLE-205ENST00000521232 RPL6Q02878 288 aaKnown RBP17.68■□□□□ 0.42
SQLE-205ENST00000521232 KRT31Q15323 416 aa17.68■□□□□ 0.42
SQLE-205ENST00000521232 PTPN20Q4JDL3 420 aa17.68■□□□□ 0.42
SQLE-205ENST00000521232 STPG1Q5TH74 334 aa17.68■□□□□ 0.42
SQLE-205ENST00000521232 MBLAC2Q68D91 279 aa17.68■□□□□ 0.42
SQLE-205ENST00000521232 OR6B2Q6IFH4 312 aa17.68■□□□□ 0.42
SQLE-205ENST00000521232 SASS6Q6UVJ0 657 aa17.68■□□□□ 0.42
SQLE-205ENST00000521232 OLFML1Q6UWY5 402 aa17.68■□□□□ 0.42
SQLE-205ENST00000521232 SERPINA13PQ6UXR4 307 aa17.68■□□□□ 0.42
SQLE-205ENST00000521232 FAM183BPQ6ZVS7 135 aa17.68■□□□□ 0.42
SQLE-205ENST00000521232 ZDHHC17Q8IUH5 632 aa17.68■□□□□ 0.42
SQLE-205ENST00000521232 SYT12Q8IV01 421 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms